RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 PRR14Q9BWN1 585 aa14.2□□□□□ -0.14
CASC3-201ENST00000264645 ZNF700Q9H0M5 742 aa14.2□□□□□ -0.14
CASC3-201ENST00000264645 A0A1B0GV50 99 aa14.19□□□□□ -0.14
CASC3-201ENST00000264645 ACOT7O00154 380 aa14.19□□□□□ -0.14
CASC3-201ENST00000264645 SCGNO76038 276 aa14.19□□□□□ -0.14
CASC3-201ENST00000264645 ACP5P13686 325 aa14.19□□□□□ -0.14
CASC3-201ENST00000264645 ZFP82Q8N141 532 aa14.19□□□□□ -0.14
CASC3-201ENST00000264645 TCTEX1D2Q8WW35 142 aa14.19□□□□□ -0.14
CASC3-201ENST00000264645 GLYATL1Q969I3 302 aa14.19□□□□□ -0.14
CASC3-201ENST00000264645 GPR62Q9BZJ7 368 aa14.19□□□□□ -0.14
CASC3-201ENST00000264645 TPOP07202 933 aa14.19□□□□□ -0.14
CASC3-201ENST00000264645 SPINT3P49223 89 aa14.19□□□□□ -0.14
CASC3-201ENST00000264645 PGFP49763 221 aa14.19□□□□□ -0.14
CASC3-201ENST00000264645 ALKAL1Q6UXT8 129 aa14.19□□□□□ -0.14
CASC3-201ENST00000264645 OR2L5Q8NG80 312 aa14.19□□□□□ -0.14
CASC3-201ENST00000264645 OR6N2Q8NGY6 317 aa14.19□□□□□ -0.14
CASC3-201ENST00000264645 SLC41A3Q96GZ6 507 aa14.19□□□□□ -0.14
CASC3-201ENST00000264645 PRRC1Q96M27 445 aa14.19□□□□□ -0.14
CASC3-201ENST00000264645 ZNF304Q9HCX3 659 aa14.19□□□□□ -0.14
CASC3-201ENST00000264645 NIT2Q9NQR4 276 aa14.19□□□□□ -0.14
CASC3-201ENST00000264645 MEMO1Q9Y316 297 aa14.19□□□□□ -0.14
CASC3-201ENST00000264645 HHLA1C9JL84 531 aa14.19□□□□□ -0.14
CASC3-201ENST00000264645 C1QTNF3-AMACRE9PGA6 284 aa14.19□□□□□ -0.14
CASC3-201ENST00000264645 VNN2O95498 520 aa14.19□□□□□ -0.14
CASC3-201ENST00000264645 COL2A1P02458 1487 aaPredicted RBP14.19□□□□□ -0.14
CASC3-201ENST00000264645 PIPP12273 146 aaPredicted RBP14.19□□□□□ -0.14
CASC3-201ENST00000264645 CBR1P16152 277 aa14.19□□□□□ -0.14
CASC3-201ENST00000264645 CMPK1P30085 196 aa14.19□□□□□ -0.14
CASC3-201ENST00000264645 CDNFQ49AH0 187 aa14.19□□□□□ -0.14
CASC3-201ENST00000264645 HACD4Q5VWC8 232 aa14.19□□□□□ -0.14
CASC3-201ENST00000264645 ACSM5Q6NUN0 579 aa14.19□□□□□ -0.14
CASC3-201ENST00000264645 RPS10P5Q9NQ39 176 aa14.19□□□□□ -0.14
CASC3-201ENST00000264645 TAS2R8Q9NYW2 309 aa14.19□□□□□ -0.14
CASC3-201ENST00000264645 GPN3Q9UHW5 284 aaPredicted RBP14.19□□□□□ -0.14
CASC3-201ENST00000264645 EXO1Q9UQ84 846 aaKnown RBP14.19□□□□□ -0.14
CASC3-201ENST00000264645 HMGN2P05204 90 aaKnown RBP14.18□□□□□ -0.14
CASC3-201ENST00000264645 ZNF35P13682 527 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 ZNF30P17039 623 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 XCR1P46094 333 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 TNFRSF17Q02223 184 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 ACVR1Q04771 509 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 TMEM88Q6PEY1 159 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 ESPNLQ6ZVH7 1005 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 LRRC56Q8IYG6 542 aaPredicted RBP14.18□□□□□ -0.14
CASC3-201ENST00000264645 ZNF101Q8IZC7 436 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 OR6V1Q8N148 313 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 OR10H5Q8NGA6 315 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 SYNPRQ8TBG9 265 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 FOXJ1Q92949 421 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 RBM18Q96H35 190 aaKnown RBP14.18□□□□□ -0.14
CASC3-201ENST00000264645 LMF1Q96S06 567 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 EIF5A2Q9GZV4 153 aaKnown RBP14.18□□□□□ -0.14
CASC3-201ENST00000264645 C20orf85Q9H1P6 137 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 SRA1Q9HD15 236 aaKnown RBP14.18□□□□□ -0.14
CASC3-201ENST00000264645 MRTO4Q9UKD2 239 aaKnown RBP14.18□□□□□ -0.14
CASC3-201ENST00000264645 YIPF1Q9Y548 306 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 DOT1LQ8TEK3 1739 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 FAM171A2A8MVW0 826 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 LCMT2O60294 686 aaKnown RBP14.18□□□□□ -0.14
CASC3-201ENST00000264645 ACSM4P0C7M7 580 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 AKR1C4P17516 323 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 MMP11P24347 488 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 HOXC13P31276 330 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 HYAL2Q12891 473 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 RAB11FIP2Q7L804 512 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 ZNF584Q8IVC4 421 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 CENPMQ9NSP4 180 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 LAMP5Q9UJQ1 280 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 SOCS6O14544 535 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 FADS1O60427 444 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 SFTPBP07988 381 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 GKN3PP0CG01 181 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 PRSS3P35030 304 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 RFX2P48378 723 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 DGCR2P98153 550 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 ZNF616Q08AN1 781 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 PGGHGQ32M88 737 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 TMEM205Q6UW68 189 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 RELL2Q8NC24 303 aaPredicted RBP14.18□□□□□ -0.14
CASC3-201ENST00000264645 SCARB1Q8WTV0 552 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 GHSRQ92847 366 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 LMLNQ96KR4 655 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 C1QTNF6Q9BXI9 259 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 DMRT3Q9NQL9 472 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 LIPT1Q9Y234 373 aa14.18□□□□□ -0.14
CASC3-201ENST00000264645 A0A1W2PRU2 124 aa14.17□□□□□ -0.14
CASC3-201ENST00000264645 AGR2O95994 175 aa14.17□□□□□ -0.14
CASC3-201ENST00000264645 UBBP0CG47 229 aa14.17□□□□□ -0.14
CASC3-201ENST00000264645 UBCP0CG48 685 aaKnown RBP14.17□□□□□ -0.14
CASC3-201ENST00000264645 FLI1Q01543 452 aaPredicted RBP14.17□□□□□ -0.14
CASC3-201ENST00000264645 FBXO42Q6P3S6 717 aa14.17□□□□□ -0.14
CASC3-201ENST00000264645 WDR53Q7Z5U6 358 aaPredicted RBP14.17□□□□□ -0.14
CASC3-201ENST00000264645 SAMD14Q8IZD0 417 aaPredicted RBP14.17□□□□□ -0.14
CASC3-201ENST00000264645 PXT1Q8NFP0 134 aa14.17□□□□□ -0.14
CASC3-201ENST00000264645 LGALS14Q8TCE9 139 aa14.17□□□□□ -0.14
CASC3-201ENST00000264645 APH1BQ8WW43 257 aa14.17□□□□□ -0.14
CASC3-201ENST00000264645 LCN9Q8WX39 176 aa14.17□□□□□ -0.14
CASC3-201ENST00000264645 UPRTQ96BW1 309 aa14.17□□□□□ -0.14
CASC3-201ENST00000264645 ABRACLQ9P1F3 81 aa14.17□□□□□ -0.14
CASC3-201ENST00000264645 ZNF840PA6NDX5 716 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms