RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 METTL17Q9H7H0 456 aaPredicted RBP12.13□□□□□ -0.47
SNX1-201ENST00000261889 ZFP64Q9NPA5 681 aa12.13□□□□□ -0.47
SNX1-201ENST00000261889 C4orf47A7E2U8 309 aa12.13□□□□□ -0.47
SNX1-201ENST00000261889 SLC22A5O76082 557 aa12.13□□□□□ -0.47
SNX1-201ENST00000261889 HOXB6P17509 224 aaKnown RBP12.13□□□□□ -0.47
SNX1-201ENST00000261889 PPP2R1BP30154 601 aa12.13□□□□□ -0.47
SNX1-201ENST00000261889 FGL2Q14314 439 aa12.13□□□□□ -0.47
SNX1-201ENST00000261889 KCNAB1Q14722 419 aa12.13□□□□□ -0.47
SNX1-201ENST00000261889 TCTE3Q8IZS6 198 aa12.13□□□□□ -0.47
SNX1-201ENST00000261889 TRAM1L1Q8N609 369 aa12.13□□□□□ -0.47
SNX1-201ENST00000261889 SLC16A11Q8NCK7 471 aa12.13□□□□□ -0.47
SNX1-201ENST00000261889 ZCCHC10Q8TBK6 192 aa12.13□□□□□ -0.47
SNX1-201ENST00000261889 AMDHD1Q96NU7 426 aa12.13□□□□□ -0.47
SNX1-201ENST00000261889 SEC22CQ9BRL7 303 aa12.13□□□□□ -0.47
SNX1-201ENST00000261889 TMEM74BQ9NUR3 256 aa12.13□□□□□ -0.47
SNX1-201ENST00000261889 IL36AQ9UHA7 158 aa12.13□□□□□ -0.47
SNX1-201ENST00000261889 MEIS3P1A6NDR6 274 aa12.13□□□□□ -0.47
SNX1-201ENST00000261889 PDGFAP04085 211 aa12.13□□□□□ -0.47
SNX1-201ENST00000261889 SOD2P04179 222 aa12.13□□□□□ -0.47
SNX1-201ENST00000261889 C6P13671 934 aa12.13□□□□□ -0.47
SNX1-201ENST00000261889 CDK5Q00535 292 aa12.13□□□□□ -0.47
SNX1-201ENST00000261889 ADAM15Q13444 863 aa12.13□□□□□ -0.47
SNX1-201ENST00000261889 DSG2Q14126 1118 aa12.13□□□□□ -0.47
SNX1-201ENST00000261889 ST3GAL2Q16842 350 aa12.13□□□□□ -0.47
SNX1-201ENST00000261889 ENTPD8Q5MY95 495 aa12.13□□□□□ -0.47
SNX1-201ENST00000261889 SFRP5Q5T4F7 317 aa12.13□□□□□ -0.47
SNX1-201ENST00000261889 ZBTB37Q5TC79 503 aa12.13□□□□□ -0.47
SNX1-201ENST00000261889 FBXO15Q8NCQ5 510 aaPredicted RBP12.13□□□□□ -0.47
SNX1-201ENST00000261889 GIMAP1Q8WWP7 306 aa12.13□□□□□ -0.47
SNX1-201ENST00000261889 SLC38A2Q96QD8 506 aa12.13□□□□□ -0.47
SNX1-201ENST00000261889 DDOQ99489 341 aa12.13□□□□□ -0.47
SNX1-201ENST00000261889 ALG8Q9BVK2 526 aa12.13□□□□□ -0.47
SNX1-201ENST00000261889 STOML2Q9UJZ1 356 aa12.13□□□□□ -0.47
SNX1-201ENST00000261889 TCRBV16S1A1N1A0A5B0 115 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 NDUFS4O43181 175 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 DPM1O60762 260 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 OR7A10O76100 309 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 WNT1P04628 370 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 PAICSP22234 425 aaKnown RBP12.12□□□□□ -0.47
SNX1-201ENST00000261889 HSD3B2P26439 372 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 BTCP35070 178 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 PER3P56645 1201 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 FZD5Q13467 585 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 ESCO2Q56NI9 601 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 CDKL4Q5MAI5 379 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 METAP1DQ6UB28 335 aaPredicted RBP12.12□□□□□ -0.47
SNX1-201ENST00000261889 GALNT11Q8NCW6 608 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 THAP4Q8WY91 577 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 DERL3Q96Q80 235 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 PDCD1LG2Q9BQ51 273 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 MARVELD1Q9BSK0 173 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 BRD7Q9NPI1 651 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 TALDO1P37837 337 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 VIPR2P41587 438 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 OCLNQ16625 522 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 TMEM201Q5SNT2 666 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 HES5Q5TA89 166 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 TEX261Q6UWH6 196 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 THSD4Q6ZMP0 1018 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 KLHL36Q8N4N3 616 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 LINC01555Q8NAE3 123 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 OR2T4Q8NH00 348 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 OR5J2Q8NH18 312 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 C2orf15Q8WU43 125 aaKnown RBP12.12□□□□□ -0.47
SNX1-201ENST00000261889 OR5P2Q8WZ92 322 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 MCHR1Q99705 422 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 CACNG6Q9BXT2 260 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 ENOPH1Q9UHY7 261 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 U3KQ87 197 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 DENND4CQ5VZ89 1909 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 DAPL1A0PJW8 107 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 HIDE1A8MVS5 230 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 GMDSO60547 372 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 HLA-DPB1P04440 258 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 HLA-DMAP28067 261 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 BNC1Q01954 994 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 TPBGQ13641 420 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 LGALSLQ3ZCW2 172 aaPredicted RBP12.12□□□□□ -0.47
SNX1-201ENST00000261889 GDPGP1Q6ZNW5 385 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 FTMTQ8N4E7 242 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 ARIH2OSQ8N7S6 290 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 OR13C2Q8NGS9 318 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 OR8K3Q8NH51 312 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 C4orf36Q96KX1 117 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 LRRC3BQ96PB8 259 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 IL23AQ9NPF7 189 aa12.12□□□□□ -0.47
SNX1-201ENST00000261889 A0A1W2PR48 441 aa12.11□□□□□ -0.47
SNX1-201ENST00000261889 MAT2AP31153 395 aaKnown RBP12.11□□□□□ -0.47
SNX1-201ENST00000261889 RPS27P42677 84 aaKnown RBP12.11□□□□□ -0.47
SNX1-201ENST00000261889 SNTA1Q13424 505 aa12.11□□□□□ -0.47
SNX1-201ENST00000261889 NNATQ16517 81 aa12.11□□□□□ -0.47
SNX1-201ENST00000261889 C3orf38Q5JPI3 329 aa12.11□□□□□ -0.47
SNX1-201ENST00000261889 FIGNL1Q6PIW4 674 aa12.11□□□□□ -0.47
SNX1-201ENST00000261889 ZNF322Q6U7Q0 402 aaPredicted RBP12.11□□□□□ -0.47
SNX1-201ENST00000261889 ALKAL2Q6UX46 152 aa12.11□□□□□ -0.47
SNX1-201ENST00000261889 Q6ZTK2 550 aa12.11□□□□□ -0.47
SNX1-201ENST00000261889 KRT78Q8N1N4 520 aa12.11□□□□□ -0.47
SNX1-201ENST00000261889 FBXL6Q8N531 539 aa12.11□□□□□ -0.47
SNX1-201ENST00000261889 IRF7Q92985 503 aa12.11□□□□□ -0.47
SNX1-201ENST00000261889 PEX11GQ96HA9 241 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms