RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 ANXA11P50995 505 aaKnown RBP13.52□□□□□ -0.25
SFSWAP-201ENST00000261674 BTN3A2P78410 334 aa13.52□□□□□ -0.25
SFSWAP-201ENST00000261674 CDK3Q00526 305 aa13.52□□□□□ -0.25
SFSWAP-201ENST00000261674 REEP5Q00765 189 aa13.52□□□□□ -0.25
SFSWAP-201ENST00000261674 ELAVL3Q14576 367 aaKnown RBP13.52□□□□□ -0.25
SFSWAP-201ENST00000261674 PEX5LQ8IYB4 626 aa13.52□□□□□ -0.25
SFSWAP-201ENST00000261674 RAB42Q8N4Z0 105 aa13.52□□□□□ -0.25
SFSWAP-201ENST00000261674 PPP1R16AQ96I34 528 aa13.52□□□□□ -0.25
SFSWAP-201ENST00000261674 MBNL1Q9NR56 388 aaKnown RBP13.52□□□□□ -0.25
SFSWAP-201ENST00000261674 UCKL1Q9NWZ5 548 aa13.52□□□□□ -0.25
SFSWAP-201ENST00000261674 GDE1Q9NZC3 331 aa13.52□□□□□ -0.25
SFSWAP-201ENST00000261674 A0A1W2PPV9 198 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 PDX1P52945 283 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 OR10A3P58181 314 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 PRDX1Q06830 199 aaKnown RBP13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 TJAP1Q5JTD0 557 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 SYT9Q86SS6 491 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 ZCCHC10Q8TBK6 192 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 SLC38A1Q9H2H9 487 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 PELI2Q9HAT8 420 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 CACYBPQ9HB71 228 aaKnown RBP13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 FGF20Q9NP95 211 aaPredicted RBP13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 CD93Q9NPY3 652 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 SLC7A7Q9UM01 511 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 IGKV1-8A0A0C4DH67 115 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 TRDV1A0A1B0GX56 115 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 CDC42EP2O14613 210 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 GYPBP06028 91 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 CISD3P0C7P0 127 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 HIST1H1TP22492 207 aaPredicted RBP13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 MPIP34949 423 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 GZMKP49863 264 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 METRNLQ641Q3 311 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 AMIGO1Q86WK6 493 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 SIX5Q8N196 739 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 NATD1Q8N6N6 113 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 SIRT6Q8N6T7 355 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 KCT2Q8NC54 265 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 ENAMQ9NRM1 1142 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 NKIRAS2Q9NYR9 191 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 ZNF780BQ9Y6R6 833 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 A0A0G2JPF8 293 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 DAPL1A0PJW8 107 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 HNRNPCL2B2RXH8 293 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 HNRNPCL3B7ZW38 293 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 HNRNPCL4P0DMR1 293 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 BMP8BP34820 402 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 RPTNQ6XPR3 784 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 MTSS1LQ765P7 747 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 CXXC5Q7LFL8 322 aaKnown RBP13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 OR5H6Q8NGV6 325 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 TMEM43Q9BTV4 400 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 PINK1Q9BXM7 581 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 RNF32Q9H0A6 362 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 BTBD1Q9H0C5 482 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 ATP13A2Q9NQ11 1180 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 CD207Q9UJ71 328 aa13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 SIRT4Q9Y6E7 314 aaPredicted RBP13.51□□□□□ -0.25
SFSWAP-201ENST00000261674 A0A1W2PQ72 361 aa13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 ZNF860A6NHJ4 632 aa13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 J3QLW9 94 aa13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 MAGEB4O15481 346 aaPredicted RBP13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 HCN1O60741 890 aa13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 SYPP08247 313 aa13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 DRD2P14416 443 aa13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 IL9P15248 144 aa13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 ZNF19P17023 458 aa13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 MAB21L1Q13394 359 aa13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 GNA13Q14344 377 aa13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 TMEFF1Q8IYR6 380 aa13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 FBXL6Q8N531 539 aa13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 LINC00471Q8N535 108 aa13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 SMRP1Q8NCR6 262 aa13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 BEST4Q8NFU0 473 aa13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 OR2A1Q8NGT9 310 aa13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 OR51A7Q8NH64 312 aa13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 OSTF1Q92882 214 aa13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 SLC41A3Q96GZ6 507 aa13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 CAMK1GQ96NX5 476 aa13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 CDCA3Q99618 268 aaPredicted RBP13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 ENKD1Q9H0I2 346 aa13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 ADAP2Q9NPF8 381 aa13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 SPHK1Q9NYA1 384 aa13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 COL4A3Q01955 1670 aa13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 DENND4CQ5VZ89 1909 aa13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 LOC105369274A0A096LPK9 316 aa13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 EDDM13A0A1B0GTR0 161 aa13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 GTPBP1O00178 669 aaKnown RBP13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 ZNF780AO75290 641 aaPredicted RBP13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 ZNF155Q12901 538 aaPredicted RBP13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 AGERQ15109 404 aa13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 GAB4Q2WGN9 574 aa13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 RASSF6Q6ZTQ3 369 aa13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 OR4N4Q8N0Y3 316 aa13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 TMEM99Q8N816 258 aa13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 OR2T33Q8NG76 320 aa13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 CDS1Q92903 461 aa13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 LINC00615Q96LM1 132 aaPredicted RBP13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 NUDT15Q9NV35 164 aa13.5□□□□□ -0.25
SFSWAP-201ENST00000261674 CA14Q9ULX7 337 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms