RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 MALT1Q9UDY8 824 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 MSRAQ9UJ68 235 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 BOLA1Q9Y3E2 137 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 HEBP2Q9Y5Z4 205 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 CDH10Q9Y6N8 788 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 PRSS38A1L453 326 aa13.4□□□□□ -0.26
HIF3A-202ENST00000244303 HMX3A6NHT5 357 aa13.4□□□□□ -0.26
HIF3A-202ENST00000244303 NOTOA8MTQ0 251 aa13.4□□□□□ -0.26
HIF3A-202ENST00000244303 B4DXG7 233 aa13.4□□□□□ -0.26
HIF3A-202ENST00000244303 NDUFV2P19404 249 aa13.4□□□□□ -0.26
HIF3A-202ENST00000244303 AK4P27144 223 aaPredicted RBP13.4□□□□□ -0.26
HIF3A-202ENST00000244303 GCGRP47871 477 aa13.4□□□□□ -0.26
HIF3A-202ENST00000244303 RPS15AP62244 130 aaKnown RBP13.4□□□□□ -0.26
HIF3A-202ENST00000244303 SIM1P81133 766 aaPredicted RBP13.4□□□□□ -0.26
HIF3A-202ENST00000244303 DUSP5Q16690 384 aa13.4□□□□□ -0.26
HIF3A-202ENST00000244303 CCNJQ5T5M9 372 aa13.4□□□□□ -0.26
HIF3A-202ENST00000244303 VASNQ6EMK4 673 aa13.4□□□□□ -0.26
HIF3A-202ENST00000244303 CNIH2Q6PI25 160 aa13.4□□□□□ -0.26
HIF3A-202ENST00000244303 B3GLCTQ6Y288 498 aa13.4□□□□□ -0.26
HIF3A-202ENST00000244303 CPOQ8IVL8 374 aa13.4□□□□□ -0.26
HIF3A-202ENST00000244303 PEX5LQ8IYB4 626 aa13.4□□□□□ -0.26
HIF3A-202ENST00000244303 NEIL3Q8TAT5 605 aa13.4□□□□□ -0.26
HIF3A-202ENST00000244303 FAM131CQ96AQ9 280 aa13.4□□□□□ -0.26
HIF3A-202ENST00000244303 ATF6BQ99941 703 aa13.4□□□□□ -0.26
HIF3A-202ENST00000244303 PAQR5Q9NXK6 330 aaPredicted RBP13.4□□□□□ -0.26
HIF3A-202ENST00000244303 OR6C2Q9NZP2 312 aa13.4□□□□□ -0.26
HIF3A-202ENST00000244303 FANCMQ8IYD8 2048 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 TBC1D3DA0A087WVF3 549 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 TBC1D3IA0A087WXS9 549 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 TBC1D3EA0A087X179 549 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 TBC1D3KA0A087X1G2 549 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 TBC1D3FA6NER0 549 aaPredicted RBP13.39□□□□□ -0.27
HIF3A-202ENST00000244303 CD8B2A6NJW9 211 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 TBC1D3LB9A6J9 549 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 CHST10O43529 356 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 DNAJB6O75190 326 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 HLA-DPB1P04440 258 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 TBC1D3HP0C7X1 549 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 CD8BP10966 210 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 KIR2DL3P43628 341 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 ADPRHP54922 357 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 ACSM1Q08AH1 577 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 FZD5Q13467 585 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 P2RY14Q15391 338 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 GPR68Q15743 365 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 ARHGAP11BQ3KRB8 267 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 TBC1D3GQ6DHY5 549 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 TBC1D3CQ6IPX1 549 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 KLBQ86Z14 1044 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 TBC1D3Q8IZP1 549 aaPredicted RBP13.39□□□□□ -0.27
HIF3A-202ENST00000244303 OR4K14Q8NGD5 310 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 OR51G2Q8NGK0 314 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 DOK4Q8TEW6 326 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 OR2M4Q96R27 311 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 GABRG3Q99928 467 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 S1PR5Q9H228 398 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 KCMF1Q9P0J7 381 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 H2AFY2Q9P0M6 372 aaPredicted RBP13.39□□□□□ -0.27
HIF3A-202ENST00000244303 NTMQ9P121 344 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 CLEC1BQ9P126 229 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 TNFRSF10DQ9UBN6 386 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 KLF15Q9UIH9 416 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 RANBP2P49792 3224 aaKnown RBP13.39□□□□□ -0.27
HIF3A-202ENST00000244303 TRBV23OR9-2A0A075B6M9 112 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 A0A0B4J293 547 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.39□□□□□ -0.27
HIF3A-202ENST00000244303 C2orf92A0A1B0GVN3 265 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.39□□□□□ -0.27
HIF3A-202ENST00000244303 AGR2O95994 175 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 ZGLP1P0C6A0 271 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 SLC35G6P0C7Q6 338 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 SLC2A2P11168 524 aaPredicted RBP13.39□□□□□ -0.27
HIF3A-202ENST00000244303 FUT1P19526 365 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 COL9A1P20849 921 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 MYL9P24844 172 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 ZNF136P52737 540 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 DEFB134Q4QY38 66 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 LCN1P1Q5VSP4 162 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 SDE2Q6IQ49 451 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 CXXC5Q7LFL8 322 aaKnown RBP13.39□□□□□ -0.27
HIF3A-202ENST00000244303 OR2L13Q8N349 312 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 OR52N1Q8NH53 320 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 ZFPM2Q8WW38 1151 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 RNF31Q96EP0 1072 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 SCARF2Q96GP6 870 aaPredicted RBP13.39□□□□□ -0.27
HIF3A-202ENST00000244303 SDF2Q99470 211 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 C1QTNF7Q9BXJ2 289 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 DPH1Q9BZG8 443 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 UBQLN3Q9H347 655 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 PPP1R3EQ9H7J1 279 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 RNF121Q9H920 327 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 ISG20L2Q9H9L3 353 aaKnown RBP13.39□□□□□ -0.27
HIF3A-202ENST00000244303 CACYBPQ9HB71 228 aaKnown RBP13.39□□□□□ -0.27
HIF3A-202ENST00000244303 TMEM74BQ9NUR3 256 aa13.39□□□□□ -0.27
HIF3A-202ENST00000244303 TMA7Q9Y2S6 64 aaKnown RBP13.39□□□□□ -0.27
HIF3A-202ENST00000244303 POM121BA6NF01 834 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 DVL2O14641 736 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 P2RX6O15547 441 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 SCO2O43819 266 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 PRG2P13727 222 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms