RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 EXTL1Q92935 676 aa10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 PYURFQ96I23 114 aa10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 IMMP1LQ96LU5 166 aa10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 BTBD9Q96Q07 612 aa10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 PINK1Q9BXM7 581 aa10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 QRSL1Q9H0R6 528 aaKnown RBP10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 ENAMQ9NRM1 1142 aa10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 OR5H15A6NDH6 313 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 hCG_2039718K7EN88 272 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 ZNF264O43296 627 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 DNAJB5O75953 348 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 ANGPTL1O95841 491 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 RPSAP08865 295 aaKnown RBP10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 SLC6A8P48029 635 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 HLCSP50747 726 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 FOXK2Q01167 660 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 SGCBQ16585 318 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 PIGGQ5H8A4 983 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 PRAMEF8Q5VWM4 474 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 PRAMEF7Q5VXH5 474 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 MARCH3Q86UD3 253 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 VRK2Q86Y07 508 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 ZDHHC21Q8IVQ6 265 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 C9orf43Q8TAL5 461 aaPredicted RBP10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 CTHRC1Q96CG8 243 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 TAPBPLQ9BX59 468 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 TRIM2Q9C040 744 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 CARD8Q9Y2G2 431 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 OR6C70A6NIJ9 312 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 SFTPCP11686 197 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 CYP4B1P13584 511 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 GCGRP47871 477 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 PSG6Q00889 435 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 SRSF6Q13247 344 aaKnown RBP10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 OLIG3Q7RTU3 272 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 CARM1Q86X55 608 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 SHISA5Q8N114 240 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 MED19A0JLT2 244 aaPredicted RBP10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 FCMRO60667 390 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 TPST2O60704 377 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 ICOSLGO75144 302 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 IFI6P09912 130 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 CBFBQ13951 182 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 ZNF766Q5HY98 468 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 PDSS1Q5T2R2 415 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 SIMC1Q8NDZ2 872 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 C17orf47Q8NEP4 570 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 MIPOL1Q8TD10 442 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 SLC38A4Q969I6 547 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 EME1Q96AY2 570 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 IKZF5Q9H5V7 419 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 VDAC3Q9Y277 283 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 ZNF443Q9Y2A4 671 aaPredicted RBP10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 SAMHD1Q9Y3Z3 626 aaKnown RBP10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 KCNE3Q9Y6H6 103 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 SPTA1P02549 2419 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 C2orf72A6NCS6 295 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 SNX4O95219 450 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 CD1EP15812 388 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 EVI2BP34910 448 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 OR1E2P47887 323 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 SLC30A6Q6NXT4 461 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 ZNF730Q6ZMV8 503 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 ASB18Q6ZVZ8 466 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 OR10G3Q8NGC4 313 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 ELP5Q8TE02 316 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 PYDC1Q8WXC3 89 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 RELTQ969Z4 430 aa10.25□□□□□ -0.77
TNFAIP3-201ENST00000237289 FXYD1O00168 92 aa10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 OR6B1O95007 311 aa10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 IGKV3-11P04433 115 aa10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 FESP07332 822 aa10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 MERTKQ12866 999 aa10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 MRPL2Q5T653 305 aaKnown RBP10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 GALNTL5Q7Z4T8 443 aa10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 ATG16L2Q8NAA4 619 aa10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 APCDD1LQ8NCL9 501 aa10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 SFXN2Q96NB2 322 aa10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 LMF1Q96S06 567 aa10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 ZNF347Q96SE7 839 aa10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 GPATCH1Q9BRR8 931 aaKnown RBP10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 RYDENQ9NUL5 291 aaKnown RBP10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 RPH3AQ9Y2J0 694 aaPredicted RBP10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 CPSF4LA6NMK7 179 aaKnown RBP10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 TTLL8A6PVC2 850 aa10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 HNRNPRO43390 633 aaKnown RBP10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 WDPCPO95876 746 aa10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 RAP2AP10114 183 aa10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 CDH2P19022 906 aaPredicted RBP10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 HOXD11P31277 338 aaPredicted RBP10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 MFAP5Q13361 173 aa10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 SLC22A16Q86VW1 577 aa10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 MCEMP1Q8IX19 187 aa10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 PSD4Q8NDX1 1056 aa10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 PIK3C3Q8NEB9 887 aa10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 ZHX1-C8orf76Q96EF9 292 aa10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 DSN1Q9H410 356 aa10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 DTX4Q9Y2E6 619 aa10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 TP53BP1Q12888 1972 aaPredicted RBP10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 ADAMDEC1O15204 470 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms