RNA–Protein interactions for RNA: ENST00000642122.1

ALK-207, Transcript of ALK receptor tyrosine kinase, humanhuman

BASIC

Gene ALK, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-207ENST00000642122 DDX49Q9Y6V7 483 aaKnown RBP13.87□□□□□ -0.19
ALK-207ENST00000642122 COL14A1Q05707 1796 aaKnown RBP13.86□□□□□ -0.19
ALK-207ENST00000642122 CHGBP05060 677 aa13.86□□□□□ -0.19
ALK-207ENST00000642122 CCDC9Q9Y3X0 531 aaKnown RBP13.86□□□□□ -0.19
ALK-207ENST00000642122 ADCK5Q3MIX3 580 aa13.86□□□□□ -0.19
ALK-207ENST00000642122 PRPF40AO75400 957 aaKnown RBP13.85□□□□□ -0.19
ALK-207ENST00000642122 NCLP19338 710 aaKnown RBP13.85□□□□□ -0.19
ALK-207ENST00000642122 RFX5P48382 616 aaPredicted RBP13.85□□□□□ -0.19
ALK-207ENST00000642122 CUL4AQ13619 759 aa13.85□□□□□ -0.19
ALK-207ENST00000642122 KIAA1211Q6ZU35 1233 aa13.85□□□□□ -0.19
ALK-207ENST00000642122 LMBRD1Q9NUN5 540 aa13.85□□□□□ -0.19
ALK-207ENST00000642122 PCDH11XQ9BZA7 1347 aa13.85□□□□□ -0.19
ALK-207ENST00000642122 PCDH11YQ9BZA8 1340 aa13.85□□□□□ -0.19
ALK-207ENST00000642122 GOLGA6L22H0YM25 854 aa13.85□□□□□ -0.19
ALK-207ENST00000642122 PTPN12Q05209 780 aaKnown RBP13.85□□□□□ -0.19
ALK-207ENST00000642122 PRPF40BQ6NWY9 871 aaKnown RBP13.85□□□□□ -0.19
ALK-207ENST00000642122 GPATCH3Q96I76 525 aa13.85□□□□□ -0.19
ALK-207ENST00000642122 ZBTB3Q9H5J0 574 aa13.85□□□□□ -0.19
ALK-207ENST00000642122 HDAC5Q9UQL6 1122 aa13.85□□□□□ -0.19
ALK-207ENST00000642122 PARP4Q9UKK3 1724 aaKnown RBP13.84□□□□□ -0.19
ALK-207ENST00000642122 PLEKHG2Q9H7P9 1386 aa13.84□□□□□ -0.19
ALK-207ENST00000642122 TFCP2Q12800 502 aa13.84□□□□□ -0.19
ALK-207ENST00000642122 NMIQ13287 307 aaPredicted RBP13.84□□□□□ -0.19
ALK-207ENST00000642122 IL17RAQ96F46 866 aa13.84□□□□□ -0.19
ALK-207ENST00000642122 GRPEL1Q9HAV7 217 aa13.84□□□□□ -0.19
ALK-207ENST00000642122 A0A0D9SFI3 127 aa13.84□□□□□ -0.19
ALK-207ENST00000642122 IL2RBP14784 551 aa13.84□□□□□ -0.19
ALK-207ENST00000642122 AK2P54819 239 aa13.84□□□□□ -0.19
ALK-207ENST00000642122 EVI5LQ96CN4 794 aa13.84□□□□□ -0.19
ALK-207ENST00000642122 CHMP3Q9Y3E7 222 aa13.84□□□□□ -0.19
ALK-207ENST00000642122 ZNF330Q9Y3S2 320 aaPredicted RBP13.84□□□□□ -0.19
ALK-207ENST00000642122 LARGE1O95461 756 aa13.83□□□□□ -0.2
ALK-207ENST00000642122 CASTP20810 708 aaKnown RBP13.83□□□□□ -0.2
ALK-207ENST00000642122 MCM2P49736 904 aa13.83□□□□□ -0.2
ALK-207ENST00000642122 CASP7P55210 303 aa13.83□□□□□ -0.2
ALK-207ENST00000642122 PLBD2Q8NHP8 589 aa13.83□□□□□ -0.2
ALK-207ENST00000642122 TTC14Q96N46 770 aa13.83□□□□□ -0.2
ALK-207ENST00000642122 DBNLQ9UJU6 430 aaKnown RBP13.83□□□□□ -0.2
ALK-207ENST00000642122 NSFL1CQ9UNZ2 370 aaKnown RBP13.83□□□□□ -0.2
ALK-207ENST00000642122 ARFGEF2Q9Y6D5 1785 aa13.83□□□□□ -0.2
ALK-207ENST00000642122 EVA1CP58658 441 aa13.83□□□□□ -0.2
ALK-207ENST00000642122 SKOR2Q2VWA4 1001 aaPredicted RBP13.83□□□□□ -0.2
ALK-207ENST00000642122 CAVIN1Q6NZI2 390 aaKnown RBP13.83□□□□□ -0.2
ALK-207ENST00000642122 LMBR1LQ6UX01 489 aa13.83□□□□□ -0.2
ALK-207ENST00000642122 RUFY3Q7L099 469 aa13.83□□□□□ -0.2
ALK-207ENST00000642122 BTG4Q9NY30 223 aa13.83□□□□□ -0.2
ALK-207ENST00000642122 RBM27Q9P2N5 1060 aaKnown RBP13.83□□□□□ -0.2
ALK-207ENST00000642122 TAF6LQ9Y6J9 622 aa13.83□□□□□ -0.2
ALK-207ENST00000642122 AFDNP55196 1824 aaKnown RBP13.83□□□□□ -0.2
ALK-207ENST00000642122 KLHL40Q2TBA0 621 aa13.82□□□□□ -0.2
ALK-207ENST00000642122 CERKQ8TCT0 537 aa13.82□□□□□ -0.2
ALK-207ENST00000642122 GPT2Q8TD30 523 aa13.82□□□□□ -0.2
ALK-207ENST00000642122 FSD1Q9BTV5 496 aa13.82□□□□□ -0.2
ALK-207ENST00000642122 CARD10Q9BWT7 1032 aa13.82□□□□□ -0.2
ALK-207ENST00000642122 PLCH1Q4KWH8 1693 aa13.81□□□□□ -0.2
ALK-207ENST00000642122 BRD1O95696 1058 aa13.81□□□□□ -0.2
ALK-207ENST00000642122 RABL6Q3YEC7 729 aaPredicted RBP13.81□□□□□ -0.2
ALK-207ENST00000642122 ZNF589Q86UQ0 364 aaPredicted RBP13.81□□□□□ -0.2
ALK-207ENST00000642122 JAKMIP1Q96N16 626 aaKnown RBP13.81□□□□□ -0.2
ALK-207ENST00000642122 DBNDD2Q9BQY9 259 aa13.81□□□□□ -0.2
ALK-207ENST00000642122 COPRSQ9NQ92 184 aa13.81□□□□□ -0.2
ALK-207ENST00000642122 MRE11P49959 708 aa13.81□□□□□ -0.2
ALK-207ENST00000642122 TNNI3KQ59H18 835 aa13.81□□□□□ -0.2
ALK-207ENST00000642122 RUFY2Q8WXA3 655 aa13.81□□□□□ -0.2
ALK-207ENST00000642122 GDPD2Q9HCC8 539 aa13.81□□□□□ -0.2
ALK-207ENST00000642122 FPGT-TNNI3KV9GXZ4 949 aa13.81□□□□□ -0.2
ALK-207ENST00000642122 KCPQ6ZWJ8 1503 aa13.81□□□□□ -0.2
ALK-207ENST00000642122 CCDC171Q6TFL3 1326 aa13.8□□□□□ -0.2
ALK-207ENST00000642122 FOXO4P98177 505 aa13.8□□□□□ -0.2
ALK-207ENST00000642122 TCEANC2Q96MN5 208 aa13.8□□□□□ -0.2
ALK-207ENST00000642122 RBM8AQ9Y5S9 174 aaKnown RBP13.8□□□□□ -0.2
ALK-207ENST00000642122 SLFNL1Q499Z3 407 aa13.8□□□□□ -0.2
ALK-207ENST00000642122 ZNF594Q96JF6 807 aaPredicted RBP13.8□□□□□ -0.2
ALK-207ENST00000642122 ERVV-2B6SEH9 535 aa13.79□□□□□ -0.2
ALK-207ENST00000642122 NECTIN1Q15223 517 aa13.79□□□□□ -0.2
ALK-207ENST00000642122 INTS4Q96HW7 963 aaKnown RBP13.79□□□□□ -0.2
ALK-207ENST00000642122 DNAJC2Q99543 621 aaKnown RBP13.79□□□□□ -0.2
ALK-207ENST00000642122 ASAP1Q9ULH1 1129 aa13.79□□□□□ -0.2
ALK-207ENST00000642122 LAMB4A4D0S4 1761 aa13.79□□□□□ -0.2
ALK-207ENST00000642122 EPB41L2O43491 1005 aaKnown RBP13.79□□□□□ -0.2
ALK-207ENST00000642122 ADAMTS2O95450 1211 aa13.79□□□□□ -0.2
ALK-207ENST00000642122 PTMSP20962 102 aa13.79□□□□□ -0.2
ALK-207ENST00000642122 KCNJ4P48050 445 aa13.79□□□□□ -0.2
ALK-207ENST00000642122 TPRNQ4KMQ1 711 aa13.79□□□□□ -0.2
ALK-207ENST00000642122 RPAP1Q9BWH6 1393 aaPredicted RBP13.78□□□□□ -0.2
ALK-207ENST00000642122 SHANK3Q9BYB0 1731 aa13.78□□□□□ -0.2
ALK-207ENST00000642122 NKX1-1Q15270 411 aaPredicted RBP13.78□□□□□ -0.2
ALK-207ENST00000642122 CREB3L3Q68CJ9 461 aa13.78□□□□□ -0.2
ALK-207ENST00000642122 CCDC129Q6ZRS4 1044 aa13.78□□□□□ -0.2
ALK-207ENST00000642122 CCDC85AQ96PX6 553 aaPredicted RBP13.78□□□□□ -0.2
ALK-207ENST00000642122 SEC62Q99442 399 aaKnown RBP13.78□□□□□ -0.2
ALK-207ENST00000642122 COL15A1P39059 1388 aa13.78□□□□□ -0.2
ALK-207ENST00000642122 H7C1W4 665 aa13.78□□□□□ -0.2
ALK-207ENST00000642122 DDX46Q7L014 1031 aaKnown RBP13.78□□□□□ -0.2
ALK-207ENST00000642122 NRAPQ86VF7 1730 aa13.77□□□□□ -0.2
ALK-207ENST00000642122 ZSCAN23Q3MJ62 389 aa13.77□□□□□ -0.21
ALK-207ENST00000642122 LRRC24Q50LG9 513 aa13.77□□□□□ -0.21
ALK-207ENST00000642122 CCDC83Q8IWF9 413 aa13.77□□□□□ -0.21
ALK-207ENST00000642122 RRAGDQ9NQL2 400 aaPredicted RBP13.77□□□□□ -0.21
ALK-207ENST00000642122 PDRG1Q9NUG6 133 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms