RNA–Protein interactions for RNA: ENST00000641339.1

RGPD1-205, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

Gene RGPD1, Length 562 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-205ENST00000641339 COL11A2P13942 1736 aaPredicted RBP21.28■■□□□ 1
RGPD1-205ENST00000641339 ARFGEF1Q9Y6D6 1849 aa21.27■■□□□ 1
RGPD1-205ENST00000641339 NPR1P16066 1061 aa21.27■■□□□ 1
RGPD1-205ENST00000641339 SYNE4Q8N205 404 aa21.27■■□□□ 1
RGPD1-205ENST00000641339 CNKSR1Q969H4 720 aa21.27■■□□□ 1
RGPD1-205ENST00000641339 ADCY9O60503 1353 aa21.26■□□□□ 0.99
RGPD1-205ENST00000641339 SLC4A2P04920 1241 aa21.26■□□□□ 0.99
RGPD1-205ENST00000641339 C3orf67Q6ZVT6 689 aa21.26■□□□□ 0.99
RGPD1-205ENST00000641339 RIC3Q7Z5B4 369 aa21.26■□□□□ 0.99
RGPD1-205ENST00000641339 RIC1Q4ADV7 1423 aa21.26■□□□□ 0.99
RGPD1-205ENST00000641339 ATP5J2-PTCD1G3V325 749 aa21.25■□□□□ 0.99
RGPD1-205ENST00000641339 C21orf2O43822 256 aa21.25■□□□□ 0.99
RGPD1-205ENST00000641339 TRIM28Q13263 835 aaKnown RBP21.25■□□□□ 0.99
RGPD1-205ENST00000641339 PRPF40BQ6NWY9 871 aaKnown RBP21.25■□□□□ 0.99
RGPD1-205ENST00000641339 G2E3Q7L622 706 aa21.25■□□□□ 0.99
RGPD1-205ENST00000641339 C7orf43Q8WVR3 580 aa21.25■□□□□ 0.99
RGPD1-205ENST00000641339 ZNF428Q96B54 188 aa21.25■□□□□ 0.99
RGPD1-205ENST00000641339 STK31Q9BXU1 1019 aa21.24■□□□□ 0.99
RGPD1-205ENST00000641339 GPBP1L1Q9HC44 474 aaPredicted RBP21.24■□□□□ 0.99
RGPD1-205ENST00000641339 RNF123Q5XPI4 1314 aa21.24■□□□□ 0.99
RGPD1-205ENST00000641339 HOXA10P31260 410 aaPredicted RBP21.23■□□□□ 0.99
RGPD1-205ENST00000641339 PRELPP51888 382 aa21.23■□□□□ 0.99
RGPD1-205ENST00000641339 ZNF219Q9P2Y4 722 aaPredicted RBP21.23■□□□□ 0.99
RGPD1-205ENST00000641339 TRMT112Q9UI30 125 aaKnown RBP21.23■□□□□ 0.99
RGPD1-205ENST00000641339 TNRC6CQ9HCJ0 1690 aaKnown RBP21.23■□□□□ 0.99
RGPD1-205ENST00000641339 NFKBIEO00221 500 aa21.22■□□□□ 0.99
RGPD1-205ENST00000641339 RASSF7Q02833 373 aa21.22■□□□□ 0.99
RGPD1-205ENST00000641339 PI4KAP2A4QPH2 592 aa21.21■□□□□ 0.99
RGPD1-205ENST00000641339 DDX58O95786 925 aaKnown RBP21.21■□□□□ 0.99
RGPD1-205ENST00000641339 HCLS1P14317 486 aaPredicted RBP21.21■□□□□ 0.99
RGPD1-205ENST00000641339 SLFN5Q08AF3 891 aa21.21■□□□□ 0.99
RGPD1-205ENST00000641339 C9orf131Q5VYM1 1079 aa21.21■□□□□ 0.99
RGPD1-205ENST00000641339 KSR2Q6VAB6 950 aa21.21■□□□□ 0.99
RGPD1-205ENST00000641339 PI4KAP1Q8N8J0 262 aa21.21■□□□□ 0.99
RGPD1-205ENST00000641339 NLRP3Q96P20 1036 aa21.21■□□□□ 0.99
RGPD1-205ENST00000641339 MYD88Q99836 296 aa21.21■□□□□ 0.99
RGPD1-205ENST00000641339 METTL22Q9BUU2 404 aaPredicted RBP21.21■□□□□ 0.99
RGPD1-205ENST00000641339 MAP3K2Q9Y2U5 619 aa21.21■□□□□ 0.99
RGPD1-205ENST00000641339 SH3TC1Q8TE82 1336 aa21.21■□□□□ 0.99
RGPD1-205ENST00000641339 ANKRD36CQ5JPF3 1778 aa21.2■□□□□ 0.99
RGPD1-205ENST00000641339 SLX4Q8IY92 1834 aa21.2■□□□□ 0.98
RGPD1-205ENST00000641339 E9PSI1 815 aa21.2■□□□□ 0.98
RGPD1-205ENST00000641339 ALDH1B1P30837 517 aa21.2■□□□□ 0.98
RGPD1-205ENST00000641339 FAM89AQ96GI7 184 aa21.2■□□□□ 0.98
RGPD1-205ENST00000641339 CDCA7LQ96GN5 454 aa21.2■□□□□ 0.98
RGPD1-205ENST00000641339 FLIIQ13045 1269 aa21.19■□□□□ 0.98
RGPD1-205ENST00000641339 TRMT2AQ8IZ69 625 aaKnown RBP21.19■□□□□ 0.98
RGPD1-205ENST00000641339 CEP350Q5VT06 3117 aa21.19■□□□□ 0.98
RGPD1-205ENST00000641339 OLFM4Q6UX06 510 aa21.18■□□□□ 0.98
RGPD1-205ENST00000641339 CCDC191Q8NCU4 936 aa21.18■□□□□ 0.98
RGPD1-205ENST00000641339 RPGRQ92834 1020 aaKnown RBP21.18■□□□□ 0.98
RGPD1-205ENST00000641339 CRAMP1Q96RY5 1269 aa21.18■□□□□ 0.98
RGPD1-205ENST00000641339 ARFGEF2Q9Y6D5 1785 aa21.18■□□□□ 0.98
RGPD1-205ENST00000641339 IGKV5-2P06315 115 aa21.17■□□□□ 0.98
RGPD1-205ENST00000641339 RNF181Q9P0P0 153 aa21.17■□□□□ 0.98
RGPD1-205ENST00000641339 RTL5Q5HYW3 569 aaPredicted RBP21.16■□□□□ 0.98
RGPD1-205ENST00000641339 ZBTB38Q8NAP3 1195 aaPredicted RBP21.16■□□□□ 0.98
RGPD1-205ENST00000641339 RBM17Q96I25 401 aaKnown RBP21.16■□□□□ 0.98
RGPD1-205ENST00000641339 LTBP3Q9NS15 1303 aa21.15■□□□□ 0.98
RGPD1-205ENST00000641339 LMNB1P20700 586 aa21.15■□□□□ 0.98
RGPD1-205ENST00000641339 SOGA3Q5TF21 947 aa21.15■□□□□ 0.98
RGPD1-205ENST00000641339 SLC51AQ86UW1 340 aa21.15■□□□□ 0.98
RGPD1-205ENST00000641339 CWC25Q9NXE8 425 aaPredicted RBP21.14■□□□□ 0.97
RGPD1-205ENST00000641339 IRS4O14654 1257 aaPredicted RBP21.13■□□□□ 0.97
RGPD1-205ENST00000641339 PCCAP05165 728 aaPredicted RBP21.13■□□□□ 0.97
RGPD1-205ENST00000641339 FKBP5Q13451 457 aaPredicted RBP21.13■□□□□ 0.97
RGPD1-205ENST00000641339 SF3B3Q15393 1217 aaKnown RBP21.13■□□□□ 0.97
RGPD1-205ENST00000641339 CCDC93Q567U6 631 aa21.13■□□□□ 0.97
RGPD1-205ENST00000641339 SNED1Q8TER0 1413 aa21.12■□□□□ 0.97
RGPD1-205ENST00000641339 ABCC4O15439 1325 aa21.12■□□□□ 0.97
RGPD1-205ENST00000641339 CWF19L2Q2TBE0 894 aaKnown RBP21.12■□□□□ 0.97
RGPD1-205ENST00000641339 JARID2Q92833 1246 aaPredicted RBP21.12■□□□□ 0.97
RGPD1-205ENST00000641339 TAOK3Q9H2K8 898 aa21.12■□□□□ 0.97
RGPD1-205ENST00000641339 SBF1O95248 1867 aa21.11■□□□□ 0.97
RGPD1-205ENST00000641339 NEURL1BA8MQ27 555 aa21.11■□□□□ 0.97
RGPD1-205ENST00000641339 KIF3CO14782 793 aa21.11■□□□□ 0.97
RGPD1-205ENST00000641339 RTKN2Q8IZC4 609 aa21.11■□□□□ 0.97
RGPD1-205ENST00000641339 DNAAF4Q8WXU2 420 aa21.11■□□□□ 0.97
RGPD1-205ENST00000641339 FER1L6Q2WGJ9 1857 aa21.11■□□□□ 0.97
RGPD1-205ENST00000641339 PPEF1O14829 653 aaPredicted RBP21.1■□□□□ 0.97
RGPD1-205ENST00000641339 FKBP4Q02790 459 aaKnown RBP eCLIP21.1■□□□□ 0.97
RGPD1-205ENST00000641339 NEXNQ0ZGT2 675 aa21.1■□□□□ 0.97
RGPD1-205ENST00000641339 CACNA1SQ13698 1873 aa21.09■□□□□ 0.97
RGPD1-205ENST00000641339 F6X3S4 739 aa21.09■□□□□ 0.97
RGPD1-205ENST00000641339 BBOX1O75936 387 aa21.09■□□□□ 0.97
RGPD1-205ENST00000641339 CC2D2BQ6DHV5 1058 aa21.09■□□□□ 0.97
RGPD1-205ENST00000641339 DDX46Q7L014 1031 aaKnown RBP21.09■□□□□ 0.97
RGPD1-205ENST00000641339 MRPL50Q8N5N7 158 aaKnown RBP21.09■□□□□ 0.97
RGPD1-205ENST00000641339 DDX60Q8IY21 1712 aaKnown RBP21.09■□□□□ 0.97
RGPD1-205ENST00000641339 H7C1W4 665 aa21.08■□□□□ 0.97
RGPD1-205ENST00000641339 GRAPQ13588 217 aa21.08■□□□□ 0.97
RGPD1-205ENST00000641339 GRAPLQ8TC17 118 aaPredicted RBP21.08■□□□□ 0.97
RGPD1-205ENST00000641339 ATP6V0A2Q9Y487 856 aa21.08■□□□□ 0.97
RGPD1-205ENST00000641339 LAMB2P55268 1798 aa21.08■□□□□ 0.96
RGPD1-205ENST00000641339 PDE8AO60658 829 aa21.07■□□□□ 0.96
RGPD1-205ENST00000641339 GCKRQ14397 625 aa21.07■□□□□ 0.96
RGPD1-205ENST00000641339 BEND3Q5T5X7 828 aa21.07■□□□□ 0.96
RGPD1-205ENST00000641339 LINS1Q8NG48 757 aa21.07■□□□□ 0.96
RGPD1-205ENST00000641339 SSH1Q8WYL5 1049 aa21.07■□□□□ 0.96
RGPD1-205ENST00000641339 PSMD1Q99460 953 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms