RNA–Protein interactions for RNA: ENST00000641314.1

PHGDH-214, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-214ENST00000641314 PDZRN3Q9UPQ7 1066 aa21.93■■□□□ 1.1
PHGDH-214ENST00000641314 RGPD3A6NKT7 1758 aaPredicted RBP21.93■■□□□ 1.1
PHGDH-214ENST00000641314 RGPD4Q7Z3J3 1758 aa21.93■■□□□ 1.1
PHGDH-214ENST00000641314 UBR3Q6ZT12 1888 aa21.93■■□□□ 1.1
PHGDH-214ENST00000641314 SRGAP3O43295 1099 aa21.92■■□□□ 1.1
PHGDH-214ENST00000641314 ZPR1O75312 459 aa21.92■■□□□ 1.1
PHGDH-214ENST00000641314 TRAPPC3LQ5T215 181 aa21.92■■□□□ 1.1
PHGDH-214ENST00000641314 NARFQ9UHQ1 456 aa21.92■■□□□ 1.1
PHGDH-214ENST00000641314 UBN2Q6ZU65 1347 aa21.92■■□□□ 1.1
PHGDH-214ENST00000641314 C4AP0C0L4 1744 aa21.92■■□□□ 1.1
PHGDH-214ENST00000641314 USPL1Q5W0Q7 1092 aa21.91■■□□□ 1.1
PHGDH-214ENST00000641314 DCTPP1Q9H773 170 aa21.91■■□□□ 1.1
PHGDH-214ENST00000641314 PCCAP05165 728 aaPredicted RBP21.91■■□□□ 1.1
PHGDH-214ENST00000641314 RFC4P35249 363 aa21.91■■□□□ 1.1
PHGDH-214ENST00000641314 SF3B2Q13435 895 aaKnown RBP21.91■■□□□ 1.1
PHGDH-214ENST00000641314 EPHA10Q5JZY3 1008 aa21.91■■□□□ 1.1
PHGDH-214ENST00000641314 NIP7Q9Y221 180 aaKnown RBP eCLIP21.91■■□□□ 1.1
PHGDH-214ENST00000641314 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.9■■□□□ 1.1
PHGDH-214ENST00000641314 FAM177BA6PVY3 158 aa21.9■■□□□ 1.1
PHGDH-214ENST00000641314 CLEC4GQ6UXB4 293 aa21.9■■□□□ 1.1
PHGDH-214ENST00000641314 ZBTB38Q8NAP3 1195 aaPredicted RBP21.9■■□□□ 1.1
PHGDH-214ENST00000641314 SSH3Q8TE77 659 aa21.9■■□□□ 1.1
PHGDH-214ENST00000641314 FAM89AQ96GI7 184 aa21.9■■□□□ 1.1
PHGDH-214ENST00000641314 ADRA2BP18089 450 aa21.89■■□□□ 1.09
PHGDH-214ENST00000641314 EN1Q05925 392 aaPredicted RBP21.89■■□□□ 1.09
PHGDH-214ENST00000641314 MTX1Q13505 466 aa21.89■■□□□ 1.09
PHGDH-214ENST00000641314 POLA2Q14181 598 aa21.89■■□□□ 1.09
PHGDH-214ENST00000641314 TRMT112Q9UI30 125 aaKnown RBP21.89■■□□□ 1.09
PHGDH-214ENST00000641314 PARP10Q53GL7 1025 aa21.88■■□□□ 1.09
PHGDH-214ENST00000641314 ANKRD45Q5TZF3 282 aa21.88■■□□□ 1.09
PHGDH-214ENST00000641314 USP42Q9H9J4 1324 aaKnown RBP21.88■■□□□ 1.09
PHGDH-214ENST00000641314 BCL2L12Q9HB09 334 aa21.88■■□□□ 1.09
PHGDH-214ENST00000641314 APBB1O00213 710 aa21.87■■□□□ 1.09
PHGDH-214ENST00000641314 SSFA2P28290 1259 aa21.87■■□□□ 1.09
PHGDH-214ENST00000641314 RGS3P49796 1198 aa21.87■■□□□ 1.09
PHGDH-214ENST00000641314 NUCB1Q02818 461 aa21.87■■□□□ 1.09
PHGDH-214ENST00000641314 EZH2Q15910 746 aaKnown RBP21.87■■□□□ 1.09
PHGDH-214ENST00000641314 ZNF827Q17R98 1081 aa21.87■■□□□ 1.09
PHGDH-214ENST00000641314 SUSD4Q5VX71 490 aa21.87■■□□□ 1.09
PHGDH-214ENST00000641314 BICDL1Q6ZP65 573 aa21.87■■□□□ 1.09
PHGDH-214ENST00000641314 EXOC6BQ9Y2D4 811 aa21.87■■□□□ 1.09
PHGDH-214ENST00000641314 RGL2O15211 777 aa21.87■■□□□ 1.09
PHGDH-214ENST00000641314 SYNE4Q8N205 404 aa21.87■■□□□ 1.09
PHGDH-214ENST00000641314 TFCP2L1Q9NZI6 479 aa21.87■■□□□ 1.09
PHGDH-214ENST00000641314 FOXO4P98177 505 aa21.86■■□□□ 1.09
PHGDH-214ENST00000641314 TBC1D9BQ66K14 1250 aa21.86■■□□□ 1.09
PHGDH-214ENST00000641314 CAMKK2Q96RR4 588 aa21.86■■□□□ 1.09
PHGDH-214ENST00000641314 UTP14AQ9BVJ6 771 aaKnown RBP21.86■■□□□ 1.09
PHGDH-214ENST00000641314 CHMP3Q9Y3E7 222 aa21.86■■□□□ 1.09
PHGDH-214ENST00000641314 CDHR2Q9BYE9 1310 aa21.85■■□□□ 1.09
PHGDH-214ENST00000641314 SURF6O75683 361 aaKnown RBP21.85■■□□□ 1.09
PHGDH-214ENST00000641314 BAG6P46379 1132 aa21.85■■□□□ 1.09
PHGDH-214ENST00000641314 RABL6Q3YEC7 729 aaPredicted RBP21.85■■□□□ 1.09
PHGDH-214ENST00000641314 LMBR1LQ6UX01 489 aa21.85■■□□□ 1.09
PHGDH-214ENST00000641314 CHD1LQ86WJ1 897 aa21.85■■□□□ 1.09
PHGDH-214ENST00000641314 AKT1S1Q96B36 256 aa21.85■■□□□ 1.09
PHGDH-214ENST00000641314 LNPKQ9C0E8 428 aa21.85■■□□□ 1.09
PHGDH-214ENST00000641314 BCL11AQ9H165 835 aa21.85■■□□□ 1.09
PHGDH-214ENST00000641314 ZBTB47Q9UFB7 747 aaPredicted RBP21.85■■□□□ 1.09
PHGDH-214ENST00000641314 IRS4O14654 1257 aaPredicted RBP21.83■■□□□ 1.09
PHGDH-214ENST00000641314 SH3TC1Q8TE82 1336 aa21.83■■□□□ 1.08
PHGDH-214ENST00000641314 TUBGCP6Q96RT7 1819 aa21.82■■□□□ 1.08
PHGDH-214ENST00000641314 DEFB132Q7Z7B7 95 aa21.82■■□□□ 1.08
PHGDH-214ENST00000641314 PA2G4Q9UQ80 394 aaKnown RBP21.82■■□□□ 1.08
PHGDH-214ENST00000641314 NTSR2O95665 410 aa21.82■■□□□ 1.08
PHGDH-214ENST00000641314 SETDB2Q96T68 719 aa21.82■■□□□ 1.08
PHGDH-214ENST00000641314 PLA2G12BQ9BX93 195 aa21.82■■□□□ 1.08
PHGDH-214ENST00000641314 SMARCA5O60264 1052 aaPredicted RBP21.81■■□□□ 1.08
PHGDH-214ENST00000641314 OS9Q13438 667 aaPredicted RBP21.81■■□□□ 1.08
PHGDH-214ENST00000641314 MSH5O43196 834 aa21.8■■□□□ 1.08
PHGDH-214ENST00000641314 PDE4AP27815 886 aa21.8■■□□□ 1.08
PHGDH-214ENST00000641314 NUTM1Q86Y26 1132 aa21.8■■□□□ 1.08
PHGDH-214ENST00000641314 KLHDC4Q8TBB5 520 aa21.79■■□□□ 1.08
PHGDH-214ENST00000641314 CCDC85AQ96PX6 553 aaPredicted RBP21.79■■□□□ 1.08
PHGDH-214ENST00000641314 COL24A1Q17RW2 1714 aa21.79■■□□□ 1.08
PHGDH-214ENST00000641314 MYH3P11055 1940 aa21.78■■□□□ 1.08
PHGDH-214ENST00000641314 PDE8AO60658 829 aa21.78■■□□□ 1.08
PHGDH-214ENST00000641314 GYS1P13807 737 aa21.78■■□□□ 1.08
PHGDH-214ENST00000641314 HCLS1P14317 486 aaPredicted RBP21.78■■□□□ 1.08
PHGDH-214ENST00000641314 RFX5P48382 616 aaPredicted RBP21.78■■□□□ 1.08
PHGDH-214ENST00000641314 HSP90AB4PQ58FF6 505 aa21.78■■□□□ 1.08
PHGDH-214ENST00000641314 LRRCC1Q9C099 1032 aa21.78■■□□□ 1.08
PHGDH-214ENST00000641314 SIL1Q9H173 461 aa21.78■■□□□ 1.08
PHGDH-214ENST00000641314 NOP58Q9Y2X3 529 aaKnown RBP21.78■■□□□ 1.08
PHGDH-214ENST00000641314 RAB11FIP3O75154 756 aa21.78■■□□□ 1.08
PHGDH-214ENST00000641314 CTSWP56202 376 aa21.78■■□□□ 1.08
PHGDH-214ENST00000641314 NBPF5PQ86XG9 351 aaPredicted RBP21.78■■□□□ 1.08
PHGDH-214ENST00000641314 COL23A1Q86Y22 540 aaPredicted RBP21.78■■□□□ 1.08
PHGDH-214ENST00000641314 ANO8Q9HCE9 1232 aaPredicted RBP21.78■■□□□ 1.08
PHGDH-214ENST00000641314 GTF2E1P29083 439 aaPredicted RBP21.77■■□□□ 1.08
PHGDH-214ENST00000641314 G3BP1Q13283 466 aaKnown RBP eCLIP21.77■■□□□ 1.087e-7■■■□□ 19.1
PHGDH-214ENST00000641314 NFIXQ14938 502 aa21.77■■□□□ 1.08
PHGDH-214ENST00000641314 FAM161AQ3B820 660 aa21.77■■□□□ 1.08
PHGDH-214ENST00000641314 ERFEQ4G0M1 354 aa21.77■■□□□ 1.08
PHGDH-214ENST00000641314 FLAD1Q8NFF5 587 aa21.77■■□□□ 1.08
PHGDH-214ENST00000641314 NYXQ9GZU5 481 aa21.77■■□□□ 1.08
PHGDH-214ENST00000641314 STK32BQ9NY57 414 aa21.77■■□□□ 1.08
PHGDH-214ENST00000641314 DDX60Q8IY21 1712 aaKnown RBP21.77■■□□□ 1.08
PHGDH-214ENST00000641314 LAMB2P55268 1798 aa21.77■■□□□ 1.07
PHGDH-214ENST00000641314 TTLL11Q8NHH1 800 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms