RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 STX1AQ16623 288 aa9.51□□□□□ -0.89
NECAP1-227ENST00000640648 ARHGAP29Q52LW3 1261 aa9.51□□□□□ -0.89
NECAP1-227ENST00000640648 OSCARQ8IYS5 282 aa9.51□□□□□ -0.89
NECAP1-227ENST00000640648 PDILTQ8N807 584 aa9.51□□□□□ -0.89
NECAP1-227ENST00000640648 CABS1Q96KC9 395 aa9.51□□□□□ -0.89
NECAP1-227ENST00000640648 JAKMIP1Q96N16 626 aaKnown RBP9.51□□□□□ -0.89
NECAP1-227ENST00000640648 VCX3BQ9H321 246 aa9.51□□□□□ -0.89
NECAP1-227ENST00000640648 VCX3AQ9NNX9 186 aa9.51□□□□□ -0.89
NECAP1-227ENST00000640648 IMPACTQ9P2X3 320 aa9.51□□□□□ -0.89
NECAP1-227ENST00000640648 DNAJC8O75937 253 aaPredicted RBP9.5□□□□□ -0.89
NECAP1-227ENST00000640648 FBXO18Q8NFZ0 1043 aa9.5□□□□□ -0.89
NECAP1-227ENST00000640648 CCHCR1Q8TD31 782 aa9.5□□□□□ -0.89
NECAP1-227ENST00000640648 CCDC114Q96M63 670 aa9.5□□□□□ -0.89
NECAP1-227ENST00000640648 LARP6Q9BRS8 491 aaKnown RBP9.5□□□□□ -0.89
NECAP1-227ENST00000640648 ZBTB12Q9Y330 459 aaPredicted RBP9.5□□□□□ -0.89
NECAP1-227ENST00000640648 TCP11Q8WWU5 503 aa9.5□□□□□ -0.89
NECAP1-227ENST00000640648 MYO1BO43795 1136 aa9.5□□□□□ -0.89
NECAP1-227ENST00000640648 SERPINC1P01008 464 aa9.5□□□□□ -0.89
NECAP1-227ENST00000640648 ZNF365Q70YC5 407 aa9.5□□□□□ -0.89
NECAP1-227ENST00000640648 INTS4Q96HW7 963 aaKnown RBP9.5□□□□□ -0.89
NECAP1-227ENST00000640648 CXorf56Q9H5V9 222 aa9.5□□□□□ -0.89
NECAP1-227ENST00000640648 PARD3Q8TEW0 1356 aa9.5□□□□□ -0.89
NECAP1-227ENST00000640648 HSF2BPO75031 334 aa9.5□□□□□ -0.89
NECAP1-227ENST00000640648 CCDC181Q5TID7 509 aa9.5□□□□□ -0.89
NECAP1-227ENST00000640648 MPHOSPH8Q99549 860 aa9.5□□□□□ -0.89
NECAP1-227ENST00000640648 LARSQ9P2J5 1176 aaKnown RBP9.5□□□□□ -0.89
NECAP1-227ENST00000640648 ANKRD36BQ8N2N9 1353 aa9.49□□□□□ -0.89
NECAP1-227ENST00000640648 RTEL1-TNFRSF6BF6WH68 1400 aa9.49□□□□□ -0.89
NECAP1-227ENST00000640648 RWDD2BP57060 319 aa9.49□□□□□ -0.89
NECAP1-227ENST00000640648 DDX46Q7L014 1031 aaKnown RBP9.49□□□□□ -0.89
NECAP1-227ENST00000640648 CUL7Q14999 1698 aa9.49□□□□□ -0.89
NECAP1-227ENST00000640648 CHUKO15111 745 aa9.49□□□□□ -0.89
NECAP1-227ENST00000640648 MARCH6O60337 910 aa9.49□□□□□ -0.89
NECAP1-227ENST00000640648 TSHZ3Q63HK5 1081 aa9.49□□□□□ -0.89
NECAP1-227ENST00000640648 CROCCP2Q86T23 111 aa9.49□□□□□ -0.89
NECAP1-227ENST00000640648 DAAM2Q86T65 1068 aa9.49□□□□□ -0.89
NECAP1-227ENST00000640648 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.49□□□□□ -0.89
NECAP1-227ENST00000640648 RBM27Q9P2N5 1060 aaKnown RBP9.49□□□□□ -0.89
NECAP1-227ENST00000640648 MYO1CO00159 1063 aa9.49□□□□□ -0.89
NECAP1-227ENST00000640648 EPB41L2O43491 1005 aaKnown RBP9.49□□□□□ -0.89
NECAP1-227ENST00000640648 MAP7Q14244 749 aa9.49□□□□□ -0.89
NECAP1-227ENST00000640648 TSNAXIP1Q2TAA8 658 aa9.49□□□□□ -0.89
NECAP1-227ENST00000640648 ALDH1L2Q3SY69 923 aa9.49□□□□□ -0.89
NECAP1-227ENST00000640648 CCDC92Q53HC0 331 aaPredicted RBP9.49□□□□□ -0.89
NECAP1-227ENST00000640648 CEP57Q86XR8 500 aa9.49□□□□□ -0.89
NECAP1-227ENST00000640648 DZIP1Q86YF9 867 aaKnown RBP9.49□□□□□ -0.89
NECAP1-227ENST00000640648 PCMTD1Q96MG8 357 aaPredicted RBP9.49□□□□□ -0.89
NECAP1-227ENST00000640648 STMN4Q9H169 189 aaPredicted RBP9.49□□□□□ -0.89
NECAP1-227ENST00000640648 SPINK5Q9NQ38 1064 aaPredicted RBP9.49□□□□□ -0.89
NECAP1-227ENST00000640648 GCOM1H8Y6P7 765 aaPredicted RBP9.49□□□□□ -0.89
NECAP1-227ENST00000640648 MYZAPP0CAP1 466 aa9.49□□□□□ -0.89
NECAP1-227ENST00000640648 LACTBP83111 547 aaPredicted RBP9.49□□□□□ -0.89
NECAP1-227ENST00000640648 ODF2Q5BJF6 829 aa9.49□□□□□ -0.89
NECAP1-227ENST00000640648 NME9Q86XW9 330 aa9.49□□□□□ -0.89
NECAP1-227ENST00000640648 FBF1Q8TES7 1133 aa9.49□□□□□ -0.89
NECAP1-227ENST00000640648 RBM42Q9BTD8 480 aaKnown RBP9.49□□□□□ -0.89
NECAP1-227ENST00000640648 SLC52A1Q9NWF4 448 aa9.49□□□□□ -0.89
NECAP1-227ENST00000640648 PRIM1P49642 420 aaKnown RBP9.48□□□□□ -0.89
NECAP1-227ENST00000640648 MCM6Q14566 821 aa9.48□□□□□ -0.89
NECAP1-227ENST00000640648 C6orf163Q5TEZ5 329 aa9.48□□□□□ -0.89
NECAP1-227ENST00000640648 TMEM51Q9NW97 253 aa9.48□□□□□ -0.89
NECAP1-227ENST00000640648 CTAGE15A4D2H0 777 aa9.48□□□□□ -0.89
NECAP1-227ENST00000640648 CTAGE8P0CG41 777 aa9.48□□□□□ -0.89
NECAP1-227ENST00000640648 CAMK4Q16566 473 aa9.48□□□□□ -0.89
NECAP1-227ENST00000640648 CCDC158Q5M9N0 1113 aa9.48□□□□□ -0.89
NECAP1-227ENST00000640648 CTAGE6Q86UF2 777 aa9.48□□□□□ -0.89
NECAP1-227ENST00000640648 CTAGE4Q8IX94 777 aa9.48□□□□□ -0.89
NECAP1-227ENST00000640648 FAM71BQ8TC56 605 aa9.48□□□□□ -0.89
NECAP1-227ENST00000640648 SYTL4Q96C24 671 aaPredicted RBP9.48□□□□□ -0.89
NECAP1-227ENST00000640648 CCDC97Q96F63 343 aaPredicted RBP9.48□□□□□ -0.89
NECAP1-227ENST00000640648 CEP85LQ5SZL2 805 aa9.48□□□□□ -0.89
NECAP1-227ENST00000640648 AACSQ86V21 672 aa9.48□□□□□ -0.89
NECAP1-227ENST00000640648 SAAL1Q96ER3 474 aa9.48□□□□□ -0.89
NECAP1-227ENST00000640648 PDRG1Q9NUG6 133 aa9.48□□□□□ -0.89
NECAP1-227ENST00000640648 VPS18Q9P253 973 aa9.48□□□□□ -0.89
NECAP1-227ENST00000640648 SUFUQ9UMX1 484 aa9.48□□□□□ -0.89
NECAP1-227ENST00000640648 STK38Q15208 465 aa9.48□□□□□ -0.89
NECAP1-227ENST00000640648 BLOC1S2Q6QNY1 142 aa9.48□□□□□ -0.89
NECAP1-227ENST00000640648 RPGRIP1Q96KN7 1286 aa9.48□□□□□ -0.89
NECAP1-227ENST00000640648 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.48□□□□□ -0.89
NECAP1-227ENST00000640648 FAM83GA6ND36 823 aa9.47□□□□□ -0.89
NECAP1-227ENST00000640648 ME1P48163 572 aa9.47□□□□□ -0.89
NECAP1-227ENST00000640648 RALGAPBQ86X10 1494 aa9.47□□□□□ -0.89
NECAP1-227ENST00000640648 TESK2Q96S53 571 aa9.47□□□□□ -0.89
NECAP1-227ENST00000640648 SCAF11Q99590 1463 aaKnown RBP9.47□□□□□ -0.89
NECAP1-227ENST00000640648 DHX16O60231 1041 aaKnown RBP9.47□□□□□ -0.89
NECAP1-227ENST00000640648 SAFBQ15424 915 aaKnown RBP eCLIP9.47□□□□□ -0.89
NECAP1-227ENST00000640648 CCDC57Q2TAC2 916 aa9.47□□□□□ -0.89
NECAP1-227ENST00000640648 SPATA32Q96LK8 384 aa9.47□□□□□ -0.89
NECAP1-227ENST00000640648 ACTR5Q9H9F9 607 aaPredicted RBP9.47□□□□□ -0.89
NECAP1-227ENST00000640648 PSD3Q9NYI0 1048 aa9.47□□□□□ -0.89
NECAP1-227ENST00000640648 FEZ2Q9UHY8 353 aaPredicted RBP9.47□□□□□ -0.89
NECAP1-227ENST00000640648 DNAI1Q9UI46 699 aa9.47□□□□□ -0.89
NECAP1-227ENST00000640648 GBP1P32455 592 aa9.47□□□□□ -0.89
NECAP1-227ENST00000640648 CCDC186Q7Z3E2 898 aa9.47□□□□□ -0.89
NECAP1-227ENST00000640648 NAP1L3Q99457 506 aaPredicted RBP9.47□□□□□ -0.89
NECAP1-227ENST00000640648 ZNF692Q9BU19 519 aaPredicted RBP9.47□□□□□ -0.89
NECAP1-227ENST00000640648 EFCAB8A8MWE9 144 aa9.46□□□□□ -0.89
NECAP1-227ENST00000640648 PPFIA1Q13136 1202 aa9.46□□□□□ -0.89
NECAP1-227ENST00000640648 BIRC2Q13490 618 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms