RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 MYD88Q99836 296 aa6.83□□□□□ -1.32
RTTN-218ENST00000640408 METTL22Q9BUU2 404 aaPredicted RBP6.83□□□□□ -1.32
RTTN-218ENST00000640408 ANKRD26Q9UPS8 1709 aa6.83□□□□□ -1.32
RTTN-218ENST00000640408 FRAT2O75474 233 aaPredicted RBP6.83□□□□□ -1.32
RTTN-218ENST00000640408 CYP19A1P11511 503 aaPredicted RBP6.83□□□□□ -1.32
RTTN-218ENST00000640408 BRPF1P55201 1214 aaPredicted RBP6.83□□□□□ -1.32
RTTN-218ENST00000640408 ZBTB1Q9Y2K1 713 aa6.83□□□□□ -1.32
RTTN-218ENST00000640408 H0YIN7 160 aa6.83□□□□□ -1.32
RTTN-218ENST00000640408 RRP1P56182 461 aaKnown RBP6.83□□□□□ -1.32
RTTN-218ENST00000640408 IFIT5Q13325 482 aaKnown RBP6.83□□□□□ -1.32
RTTN-218ENST00000640408 CEP126Q9P2H0 1117 aa6.83□□□□□ -1.32
RTTN-218ENST00000640408 MAP2P11137 1827 aaKnown RBP6.83□□□□□ -1.32
RTTN-218ENST00000640408 COL3A1P02461 1466 aaPredicted RBP6.83□□□□□ -1.32
RTTN-218ENST00000640408 CCDC173Q0VFZ6 552 aa6.83□□□□□ -1.32
RTTN-218ENST00000640408 FAM161AQ3B820 660 aa6.83□□□□□ -1.32
RTTN-218ENST00000640408 SUPT20HQ8NEM7 779 aa6.83□□□□□ -1.32
RTTN-218ENST00000640408 MTFR1LQ9H019 292 aa6.83□□□□□ -1.32
RTTN-218ENST00000640408 ANKRD18BA2A2Z9 1011 aa6.82□□□□□ -1.32
RTTN-218ENST00000640408 EIF5P55010 431 aaKnown RBP6.82□□□□□ -1.32
RTTN-218ENST00000640408 MAP3K2Q9Y2U5 619 aa6.82□□□□□ -1.32
RTTN-218ENST00000640408 HMGB1P09429 215 aaKnown RBP6.82□□□□□ -1.32
RTTN-218ENST00000640408 NAP1L2Q9ULW6 460 aaPredicted RBP6.82□□□□□ -1.32
RTTN-218ENST00000640408 VPS37DQ86XT2 251 aa6.82□□□□□ -1.32
RTTN-218ENST00000640408 EYA3Q99504 573 aa6.82□□□□□ -1.32
RTTN-218ENST00000640408 FBXO3Q9UK99 471 aa6.82□□□□□ -1.32
RTTN-218ENST00000640408 DNAJC2Q99543 621 aaKnown RBP6.82□□□□□ -1.32
RTTN-218ENST00000640408 NOB1Q9ULX3 412 aaKnown RBP6.82□□□□□ -1.32
RTTN-218ENST00000640408 AKAP2Q9Y2D5 859 aa6.82□□□□□ -1.32
RTTN-218ENST00000640408 FAM177BA6PVY3 158 aa6.81□□□□□ -1.32
RTTN-218ENST00000640408 GRM8O00222 908 aa6.81□□□□□ -1.32
RTTN-218ENST00000640408 CLASRPQ8N2M8 674 aaKnown RBP6.81□□□□□ -1.32
RTTN-218ENST00000640408 RBM17Q96I25 401 aaKnown RBP6.81□□□□□ -1.32
RTTN-218ENST00000640408 CNNM1Q9NRU3 951 aa6.81□□□□□ -1.32
RTTN-218ENST00000640408 ZNF521Q96K83 1311 aa6.81□□□□□ -1.32
RTTN-218ENST00000640408 GPTP24298 496 aa6.81□□□□□ -1.32
RTTN-218ENST00000640408 AXDND1Q5T1B0 1012 aaPredicted RBP6.81□□□□□ -1.32
RTTN-218ENST00000640408 KIAA1211Q6ZU35 1233 aa6.81□□□□□ -1.32
RTTN-218ENST00000640408 XIRP1Q702N8 1843 aaKnown RBP6.81□□□□□ -1.32
RTTN-218ENST00000640408 SOCS7O14512 581 aa6.81□□□□□ -1.32
RTTN-218ENST00000640408 PAXIP1Q6ZW49 1069 aaPredicted RBP6.81□□□□□ -1.32
RTTN-218ENST00000640408 DEFB132Q7Z7B7 95 aa6.81□□□□□ -1.32
RTTN-218ENST00000640408 KIF3AQ9Y496 699 aa6.81□□□□□ -1.32
RTTN-218ENST00000640408 RGS12O14924 1447 aa6.81□□□□□ -1.32
RTTN-218ENST00000640408 PCCAP05165 728 aaPredicted RBP6.81□□□□□ -1.32
RTTN-218ENST00000640408 IFIT1P09914 478 aaKnown RBP6.81□□□□□ -1.32
RTTN-218ENST00000640408 RDXP35241 583 aaKnown RBP6.81□□□□□ -1.32
RTTN-218ENST00000640408 MRPL50Q8N5N7 158 aaKnown RBP6.81□□□□□ -1.32
RTTN-218ENST00000640408 UPF1Q92900 1129 aaKnown RBP eCLIP6.81□□□□□ -1.32
RTTN-218ENST00000640408 ANKRD2Q9GZV1 360 aa6.81□□□□□ -1.32
RTTN-218ENST00000640408 PDE8AO60658 829 aa6.8□□□□□ -1.32
RTTN-218ENST00000640408 ANKRD18AQ8IVF6 992 aa6.8□□□□□ -1.32
RTTN-218ENST00000640408 NOL10Q9BSC4 688 aaKnown RBP6.8□□□□□ -1.32
RTTN-218ENST00000640408 COL15A1P39059 1388 aa6.8□□□□□ -1.32
RTTN-218ENST00000640408 UQCRHLA0A096LP55 91 aa6.8□□□□□ -1.32
RTTN-218ENST00000640408 GOLGA6L4A6NEF3 574 aa6.8□□□□□ -1.32
RTTN-218ENST00000640408 UQCRHP07919 91 aa6.8□□□□□ -1.32
RTTN-218ENST00000640408 MVPQ14764 893 aaKnown RBP6.8□□□□□ -1.32
RTTN-218ENST00000640408 EZH2Q15910 746 aaKnown RBP6.8□□□□□ -1.32
RTTN-218ENST00000640408 DEF6Q9H4E7 631 aa6.8□□□□□ -1.32
RTTN-218ENST00000640408 PHRF1Q9P1Y6 1649 aaKnown RBP6.8□□□□□ -1.32
RTTN-218ENST00000640408 USPL1Q5W0Q7 1092 aa6.8□□□□□ -1.32
RTTN-218ENST00000640408 ARGLU1Q9NWB6 273 aaPredicted RBP6.8□□□□□ -1.32
RTTN-218ENST00000640408 BBOX1O75936 387 aa6.8□□□□□ -1.32
RTTN-218ENST00000640408 SERPINB2P05120 415 aa6.8□□□□□ -1.32
RTTN-218ENST00000640408 ZNF622Q969S3 477 aaKnown RBP eCLIP6.8□□□□□ -1.32
RTTN-218ENST00000640408 IRS4O14654 1257 aaPredicted RBP6.79□□□□□ -1.32
RTTN-218ENST00000640408 UBE3BQ7Z3V4 1068 aa6.79□□□□□ -1.32
RTTN-218ENST00000640408 CALCOCO1Q9P1Z2 691 aa6.79□□□□□ -1.32
RTTN-218ENST00000640408 COG6Q9Y2V7 657 aa6.79□□□□□ -1.32
RTTN-218ENST00000640408 USP54Q70EL1 1684 aa6.79□□□□□ -1.32
RTTN-218ENST00000640408 CARMIL3Q8ND23 1372 aa6.79□□□□□ -1.32
RTTN-218ENST00000640408 LETM1O95202 739 aaPredicted RBP6.79□□□□□ -1.32
RTTN-218ENST00000640408 MMP10P09238 476 aa6.79□□□□□ -1.32
RTTN-218ENST00000640408 BRD2P25440 801 aaKnown RBP6.79□□□□□ -1.32
RTTN-218ENST00000640408 KCNQ3O43525 872 aa6.79□□□□□ -1.32
RTTN-218ENST00000640408 RAB11FIP3O75154 756 aa6.79□□□□□ -1.32
RTTN-218ENST00000640408 TPM3P06753 285 aa6.79□□□□□ -1.32
RTTN-218ENST00000640408 USP8P40818 1118 aa6.79□□□□□ -1.32
RTTN-218ENST00000640408 TRMT2AQ8IZ69 625 aaKnown RBP6.79□□□□□ -1.32
RTTN-218ENST00000640408 ARHGEF1Q92888 912 aaKnown RBP6.79□□□□□ -1.32
RTTN-218ENST00000640408 BRIP1Q9BX63 1249 aa6.79□□□□□ -1.32
RTTN-218ENST00000640408 ERC2O15083 957 aa6.79□□□□□ -1.32
RTTN-218ENST00000640408 CHMP5Q9NZZ3 219 aa6.79□□□□□ -1.32
RTTN-218ENST00000640408 IFIT2P09913 472 aaKnown RBP6.79□□□□□ -1.32
RTTN-218ENST00000640408 FGD1P98174 961 aa6.79□□□□□ -1.32
RTTN-218ENST00000640408 INTS3Q68E01 1043 aaKnown RBP6.79□□□□□ -1.32
RTTN-218ENST00000640408 ZBTB38Q8NAP3 1195 aaPredicted RBP6.79□□□□□ -1.32
RTTN-218ENST00000640408 GCC1Q96CN9 775 aa6.79□□□□□ -1.32
RTTN-218ENST00000640408 CAMKK2Q96RR4 588 aa6.79□□□□□ -1.32
RTTN-218ENST00000640408 KDM6AO15550 1401 aaPredicted RBP6.79□□□□□ -1.32
RTTN-218ENST00000640408 GRIN3BO60391 1043 aa6.78□□□□□ -1.32
RTTN-218ENST00000640408 TSPYL6Q8N831 410 aa6.78□□□□□ -1.32
RTTN-218ENST00000640408 SURF6O75683 361 aaKnown RBP6.78□□□□□ -1.32
RTTN-218ENST00000640408 ANXA1P04083 346 aa6.78□□□□□ -1.32
RTTN-218ENST00000640408 R3HDM1Q15032 1099 aaKnown RBP6.78□□□□□ -1.32
RTTN-218ENST00000640408 NOC3LQ8WTT2 800 aaKnown RBP6.78□□□□□ -1.32
RTTN-218ENST00000640408 JDP2Q8WYK2 163 aa6.78□□□□□ -1.32
RTTN-218ENST00000640408 RGS17Q9UGC6 210 aaPredicted RBP6.78□□□□□ -1.32
RTTN-218ENST00000640408 USP42Q9H9J4 1324 aaKnown RBP6.78□□□□□ -1.32
RTTN-218ENST00000640408 ATP5J2-PTCD1G3V325 749 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms