RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 PLEKHG3A1L390 1219 aa12.86□□□□□ -0.35
SCN1B-208ENST00000640135 SERPINC1P01008 464 aa12.86□□□□□ -0.35
SCN1B-208ENST00000640135 SSRP1Q08945 709 aaKnown RBP12.86□□□□□ -0.35
SCN1B-208ENST00000640135 NFKBIBQ15653 356 aa12.86□□□□□ -0.35
SCN1B-208ENST00000640135 NPC1L1Q9UHC9 1359 aa12.86□□□□□ -0.35
SCN1B-208ENST00000640135 GOLGA8AA7E2F4 631 aa12.86□□□□□ -0.35
SCN1B-208ENST00000640135 GOLGA8BA8MQT2 603 aa12.86□□□□□ -0.35
SCN1B-208ENST00000640135 BMP2KLQ5H9B9 411 aa12.86□□□□□ -0.35
SCN1B-208ENST00000640135 LMBR1LQ6UX01 489 aa12.86□□□□□ -0.35
SCN1B-208ENST00000640135 RUFY1Q96T51 708 aa12.86□□□□□ -0.35
SCN1B-208ENST00000640135 KAT14Q9H8E8 782 aa12.86□□□□□ -0.35
SCN1B-208ENST00000640135 NCOA7Q8NI08 942 aa12.86□□□□□ -0.35
SCN1B-208ENST00000640135 PYM1Q9BRP8 204 aaKnown RBP12.86□□□□□ -0.35
SCN1B-208ENST00000640135 CNNM2Q9H8M5 875 aa12.86□□□□□ -0.35
SCN1B-208ENST00000640135 SMTNL1A8MU46 457 aa12.85□□□□□ -0.35
SCN1B-208ENST00000640135 GNAQP50148 359 aa12.85□□□□□ -0.35
SCN1B-208ENST00000640135 WDR78Q5VTH9 848 aa12.85□□□□□ -0.35
SCN1B-208ENST00000640135 TANGO6Q9C0B7 1094 aa12.85□□□□□ -0.35
SCN1B-208ENST00000640135 PARD3Q8TEW0 1356 aa12.85□□□□□ -0.35
SCN1B-208ENST00000640135 KRT23Q9C075 422 aa12.85□□□□□ -0.35
SCN1B-208ENST00000640135 DDX21Q9NR30 783 aaKnown RBP eCLIP12.85□□□□□ -0.35
SCN1B-208ENST00000640135 LIMCH1Q9UPQ0 1083 aa12.85□□□□□ -0.35
SCN1B-208ENST00000640135 ATP8B2P98198 1209 aa12.84□□□□□ -0.35
SCN1B-208ENST00000640135 HDAC1Q13547 482 aaPredicted RBP12.84□□□□□ -0.35
SCN1B-208ENST00000640135 GNAT2P19087 354 aa12.84□□□□□ -0.35
SCN1B-208ENST00000640135 B4DLN1 442 aa12.84□□□□□ -0.35
SCN1B-208ENST00000640135 POTEJP0CG39 1038 aa12.84□□□□□ -0.35
SCN1B-208ENST00000640135 MRPL12P52815 198 aaKnown RBP12.84□□□□□ -0.35
SCN1B-208ENST00000640135 CCNL1Q9UK58 526 aaPredicted RBP12.84□□□□□ -0.35
SCN1B-208ENST00000640135 FGFR1OPO95684 399 aaKnown RBP12.83□□□□□ -0.35
SCN1B-208ENST00000640135 ANXA1P04083 346 aa12.83□□□□□ -0.35
SCN1B-208ENST00000640135 BRPF1P55201 1214 aaPredicted RBP12.83□□□□□ -0.35
SCN1B-208ENST00000640135 NLRP5P59047 1200 aa12.83□□□□□ -0.35
SCN1B-208ENST00000640135 RBM17Q96I25 401 aaKnown RBP12.83□□□□□ -0.35
SCN1B-208ENST00000640135 FBLN1P23142 703 aa12.83□□□□□ -0.36
SCN1B-208ENST00000640135 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.83□□□□□ -0.36
SCN1B-208ENST00000640135 ANKRD44Q8N8A2 993 aa12.83□□□□□ -0.36
SCN1B-208ENST00000640135 ORAI2Q96SN7 254 aa12.83□□□□□ -0.36
SCN1B-208ENST00000640135 NUP62CLQ9H1M0 184 aa12.83□□□□□ -0.36
SCN1B-208ENST00000640135 IRS4O14654 1257 aaPredicted RBP12.83□□□□□ -0.36
SCN1B-208ENST00000640135 NAA16Q6N069 864 aaPredicted RBP12.83□□□□□ -0.36
SCN1B-208ENST00000640135 CAGE1Q8TC20 777 aa12.83□□□□□ -0.36
SCN1B-208ENST00000640135 ERCC4Q92889 916 aaPredicted RBP12.83□□□□□ -0.36
SCN1B-208ENST00000640135 DEF6Q9H4E7 631 aa12.83□□□□□ -0.36
SCN1B-208ENST00000640135 MATR3P43243 847 aaKnown RBP eCLIP12.83□□□□□ -0.36
SCN1B-208ENST00000640135 TMEM67Q5HYA8 995 aa12.83□□□□□ -0.36
SCN1B-208ENST00000640135 PIBF1Q8WXW3 757 aa12.83□□□□□ -0.36
SCN1B-208ENST00000640135 ESR2Q92731 530 aa12.83□□□□□ -0.36
SCN1B-208ENST00000640135 DDX11Q96FC9 970 aa12.83□□□□□ -0.36
SCN1B-208ENST00000640135 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.82□□□□□ -0.36
SCN1B-208ENST00000640135 SCLT1Q96NL6 688 aa12.82□□□□□ -0.36
SCN1B-208ENST00000640135 SNRKQ9NRH2 765 aa12.82□□□□□ -0.36
SCN1B-208ENST00000640135 ZRANB1Q9UGI0 708 aa12.82□□□□□ -0.36
SCN1B-208ENST00000640135 GNPATO15228 680 aa12.82□□□□□ -0.36
SCN1B-208ENST00000640135 CYP7A1P22680 504 aa12.82□□□□□ -0.36
SCN1B-208ENST00000640135 IARSP41252 1262 aaKnown RBP12.82□□□□□ -0.36
SCN1B-208ENST00000640135 MRPL50Q8N5N7 158 aaKnown RBP12.82□□□□□ -0.36
SCN1B-208ENST00000640135 RBM27Q9P2N5 1060 aaKnown RBP12.82□□□□□ -0.36
SCN1B-208ENST00000640135 COL17A1Q9UMD9 1497 aaPredicted RBP12.82□□□□□ -0.36
SCN1B-208ENST00000640135 CLASP1Q7Z460 1538 aa12.82□□□□□ -0.36
SCN1B-208ENST00000640135 MCM5P33992 734 aa12.82□□□□□ -0.36
SCN1B-208ENST00000640135 BAG6P46379 1132 aa12.82□□□□□ -0.36
SCN1B-208ENST00000640135 CCDC83Q8IWF9 413 aa12.81□□□□□ -0.36
SCN1B-208ENST00000640135 RNF214Q8ND24 703 aa12.81□□□□□ -0.36
SCN1B-208ENST00000640135 FLAD1Q8NFF5 587 aa12.81□□□□□ -0.36
SCN1B-208ENST00000640135 TSG101Q99816 390 aa12.81□□□□□ -0.36
SCN1B-208ENST00000640135 CNBD1Q8NA66 436 aa12.81□□□□□ -0.36
SCN1B-208ENST00000640135 LRRC27Q9C0I9 530 aa12.81□□□□□ -0.36
SCN1B-208ENST00000640135 USP21Q9UK80 565 aa12.81□□□□□ -0.36
SCN1B-208ENST00000640135 NEK1Q96PY6 1258 aa12.81□□□□□ -0.36
SCN1B-208ENST00000640135 UPF3BQ9BZI7 483 aaKnown RBP12.81□□□□□ -0.36
SCN1B-208ENST00000640135 NBPF7P0C2Y1 421 aaPredicted RBP12.81□□□□□ -0.36
SCN1B-208ENST00000640135 STXBP4Q6ZWJ1 553 aa12.81□□□□□ -0.36
SCN1B-208ENST00000640135 CERS3Q8IU89 383 aa12.81□□□□□ -0.36
SCN1B-208ENST00000640135 MYO5CQ9NQX4 1742 aa12.8□□□□□ -0.36
SCN1B-208ENST00000640135 BMP15O95972 392 aa12.8□□□□□ -0.36
SCN1B-208ENST00000640135 TNNI2P48788 182 aa12.8□□□□□ -0.36
SCN1B-208ENST00000640135 AMPD3Q01432 767 aa12.8□□□□□ -0.36
SCN1B-208ENST00000640135 TTC41PQ6P2S7 1318 aa12.8□□□□□ -0.36
SCN1B-208ENST00000640135 ZNF790Q6PG37 636 aa12.8□□□□□ -0.36
SCN1B-208ENST00000640135 TCP11L1Q9NUJ3 509 aa12.8□□□□□ -0.36
SCN1B-208ENST00000640135 NSFL1CQ9UNZ2 370 aaKnown RBP12.8□□□□□ -0.36
SCN1B-208ENST00000640135 MAGI3Q5TCQ9 1506 aa12.8□□□□□ -0.36
SCN1B-208ENST00000640135 SH3TC1Q8TE82 1336 aa12.8□□□□□ -0.36
SCN1B-208ENST00000640135 LMOD1P29536 600 aaPredicted RBP12.8□□□□□ -0.36
SCN1B-208ENST00000640135 C8orf58Q8NAV2 365 aa12.8□□□□□ -0.36
SCN1B-208ENST00000640135 PLBD2Q8NHP8 589 aa12.8□□□□□ -0.36
SCN1B-208ENST00000640135 ZCCHC11Q5TAX3 1644 aaKnown RBP12.8□□□□□ -0.36
SCN1B-208ENST00000640135 TTC22Q5TAA0 569 aa12.79□□□□□ -0.36
SCN1B-208ENST00000640135 CCDC148Q8NFR7 591 aa12.79□□□□□ -0.36
SCN1B-208ENST00000640135 MEIS3Q99687 375 aa12.79□□□□□ -0.36
SCN1B-208ENST00000640135 PZPP20742 1482 aa12.79□□□□□ -0.36
SCN1B-208ENST00000640135 HSP90B2PQ58FF3 399 aa12.79□□□□□ -0.36
SCN1B-208ENST00000640135 NOM1Q5C9Z4 860 aaKnown RBP12.79□□□□□ -0.36
SCN1B-208ENST00000640135 CTAGE5O15320 804 aa12.79□□□□□ -0.36
SCN1B-208ENST00000640135 ERLIN2O94905 339 aa12.79□□□□□ -0.36
SCN1B-208ENST00000640135 TSPY3P0CV98 308 aa12.79□□□□□ -0.36
SCN1B-208ENST00000640135 TSPY8P0CW00 308 aa12.79□□□□□ -0.36
SCN1B-208ENST00000640135 C16orf71Q8IYS4 520 aaPredicted RBP12.79□□□□□ -0.36
SCN1B-208ENST00000640135 USP16Q9Y5T5 823 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms