RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 VAMP4O75379 141 aa10.18□□□□□ -0.78
SCARB2-220ENST00000640076 RBM6P78332 1123 aaKnown RBP10.18□□□□□ -0.78
SCARB2-220ENST00000640076 TWISTNBQ3B726 338 aaPredicted RBP10.18□□□□□ -0.78
SCARB2-220ENST00000640076 SEPT12Q8IYM1 358 aa10.18□□□□□ -0.78
SCARB2-220ENST00000640076 PKNOX2Q96KN3 472 aa10.18□□□□□ -0.78
SCARB2-220ENST00000640076 RGS17Q9UGC6 210 aaPredicted RBP10.18□□□□□ -0.78
SCARB2-220ENST00000640076 LIMD1Q9UGP4 676 aa10.18□□□□□ -0.78
SCARB2-220ENST00000640076 ELL2O00472 640 aaPredicted RBP10.17□□□□□ -0.78
SCARB2-220ENST00000640076 RARSP54136 660 aaKnown RBP10.17□□□□□ -0.78
SCARB2-220ENST00000640076 EIF4A1P60842 406 aaKnown RBP10.17□□□□□ -0.78
SCARB2-220ENST00000640076 B4GALNT3Q6L9W6 998 aa10.17□□□□□ -0.78
SCARB2-220ENST00000640076 ZNF790Q6PG37 636 aa10.17□□□□□ -0.78
SCARB2-220ENST00000640076 RNF123Q5XPI4 1314 aa10.17□□□□□ -0.78
SCARB2-220ENST00000640076 PALM3A6NDB9 673 aaPredicted RBP10.17□□□□□ -0.78
SCARB2-220ENST00000640076 SLC39A6Q13433 755 aa10.17□□□□□ -0.78
SCARB2-220ENST00000640076 DIXDC1Q155Q3 683 aa10.17□□□□□ -0.78
SCARB2-220ENST00000640076 REM2Q8IYK8 340 aaPredicted RBP10.17□□□□□ -0.78
SCARB2-220ENST00000640076 TMOD3Q9NYL9 352 aa10.17□□□□□ -0.78
SCARB2-220ENST00000640076 BCL9O00512 1426 aa10.17□□□□□ -0.78
SCARB2-220ENST00000640076 PAPPAQ13219 1627 aa10.17□□□□□ -0.78
SCARB2-220ENST00000640076 ILDR1Q86SU0 546 aaPredicted RBP10.16□□□□□ -0.78
SCARB2-220ENST00000640076 PIGBQ92521 554 aa10.16□□□□□ -0.78
SCARB2-220ENST00000640076 KIF12Q96FN5 646 aa10.16□□□□□ -0.78
SCARB2-220ENST00000640076 EP400Q96L91 3159 aa10.16□□□□□ -0.78
SCARB2-220ENST00000640076 HEG1Q9ULI3 1381 aa10.16□□□□□ -0.78
SCARB2-220ENST00000640076 BRWD3Q6RI45 1802 aa10.16□□□□□ -0.78
SCARB2-220ENST00000640076 SOS1Q07889 1333 aaPredicted RBP10.16□□□□□ -0.78
SCARB2-220ENST00000640076 UBR2Q8IWV8 1755 aa10.16□□□□□ -0.78
SCARB2-220ENST00000640076 BCAR3O75815 825 aa10.15□□□□□ -0.78
SCARB2-220ENST00000640076 LMOD1P29536 600 aaPredicted RBP10.15□□□□□ -0.78
SCARB2-220ENST00000640076 PLPP6Q8IY26 295 aa10.15□□□□□ -0.78
SCARB2-220ENST00000640076 RXRBP28702 533 aa10.15□□□□□ -0.78
SCARB2-220ENST00000640076 POTEAQ6S8J7 498 aa10.15□□□□□ -0.78
SCARB2-220ENST00000640076 SSH1Q8WYL5 1049 aa10.15□□□□□ -0.78
SCARB2-220ENST00000640076 BCL2L13Q9BXK5 485 aa10.15□□□□□ -0.78
SCARB2-220ENST00000640076 HOXB7P09629 217 aa10.14□□□□□ -0.79
SCARB2-220ENST00000640076 RRP1P56182 461 aaKnown RBP10.14□□□□□ -0.79
SCARB2-220ENST00000640076 TSR1Q2NL82 804 aaKnown RBP10.14□□□□□ -0.79
SCARB2-220ENST00000640076 ALDH1L2Q3SY69 923 aa10.14□□□□□ -0.79
SCARB2-220ENST00000640076 TTC5Q8N0Z6 440 aa10.14□□□□□ -0.79
SCARB2-220ENST00000640076 TMC2Q8TDI7 906 aa10.14□□□□□ -0.79
SCARB2-220ENST00000640076 SYTL4Q96C24 671 aaPredicted RBP10.14□□□□□ -0.79
SCARB2-220ENST00000640076 ZNF496Q96IT1 587 aaPredicted RBP10.14□□□□□ -0.79
SCARB2-220ENST00000640076 KCPQ6ZWJ8 1503 aa10.14□□□□□ -0.79
SCARB2-220ENST00000640076 GIGYF1O75420 1035 aaPredicted RBP10.14□□□□□ -0.79
SCARB2-220ENST00000640076 NCLP19338 710 aaKnown RBP10.14□□□□□ -0.79
SCARB2-220ENST00000640076 WASHC4Q2M389 1173 aa10.14□□□□□ -0.79
SCARB2-220ENST00000640076 FAM182BQ5T319 152 aa10.14□□□□□ -0.79
SCARB2-220ENST00000640076 ACSBG1Q96GR2 724 aa10.14□□□□□ -0.79
SCARB2-220ENST00000640076 SMC4Q9NTJ3 1288 aa10.14□□□□□ -0.79
SCARB2-220ENST00000640076 ASAP1Q9ULH1 1129 aa10.14□□□□□ -0.79
SCARB2-220ENST00000640076 KRT27Q7Z3Y8 459 aa10.13□□□□□ -0.79
SCARB2-220ENST00000640076 ANKRD13AQ8IZ07 590 aa10.13□□□□□ -0.79
SCARB2-220ENST00000640076 FMNL2Q96PY5 1086 aa10.13□□□□□ -0.79
SCARB2-220ENST00000640076 NPDC1Q9NQX5 325 aaPredicted RBP10.13□□□□□ -0.79
SCARB2-220ENST00000640076 ATG3Q9NT62 314 aa10.13□□□□□ -0.79
SCARB2-220ENST00000640076 FARP1Q9Y4F1 1045 aaPredicted RBP10.13□□□□□ -0.79
SCARB2-220ENST00000640076 SBF2Q86WG5 1849 aa10.13□□□□□ -0.79
SCARB2-220ENST00000640076 C5P01031 1676 aa10.12□□□□□ -0.79
SCARB2-220ENST00000640076 NHSQ6T4R5 1651 aa10.12□□□□□ -0.79
SCARB2-220ENST00000640076 TCERG1O14776 1098 aaKnown RBP10.12□□□□□ -0.79
SCARB2-220ENST00000640076 KCNQ2O43526 872 aa10.12□□□□□ -0.79
SCARB2-220ENST00000640076 NOM1Q5C9Z4 860 aaKnown RBP10.12□□□□□ -0.79
SCARB2-220ENST00000640076 RGS12O14924 1447 aa10.12□□□□□ -0.79
SCARB2-220ENST00000640076 CACNA1FO60840 1977 aa10.12□□□□□ -0.79
SCARB2-220ENST00000640076 PRAMEF22A3QJZ6 481 aa10.12□□□□□ -0.79
SCARB2-220ENST00000640076 PLIN1O60240 522 aa10.12□□□□□ -0.79
SCARB2-220ENST00000640076 PTCD1O75127 700 aaKnown RBP10.12□□□□□ -0.79
SCARB2-220ENST00000640076 SNRPA1P09661 255 aaKnown RBP10.12□□□□□ -0.79
SCARB2-220ENST00000640076 TUSC1Q2TAM9 212 aa10.12□□□□□ -0.79
SCARB2-220ENST00000640076 MRPL50Q8N5N7 158 aaKnown RBP10.12□□□□□ -0.79
SCARB2-220ENST00000640076 CCDC30Q5VVM6 783 aa10.11□□□□□ -0.79
SCARB2-220ENST00000640076 RIC3Q7Z5B4 369 aa10.11□□□□□ -0.79
SCARB2-220ENST00000640076 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.11□□□□□ -0.79
SCARB2-220ENST00000640076 UBXN4Q92575 508 aa10.11□□□□□ -0.79
SCARB2-220ENST00000640076 KIF16BQ96L93 1317 aa10.11□□□□□ -0.79
SCARB2-220ENST00000640076 FGD1P98174 961 aa10.1□□□□□ -0.79
SCARB2-220ENST00000640076 PTF1AQ7RTS3 328 aa10.1□□□□□ -0.79
SCARB2-220ENST00000640076 FRAT1Q92837 279 aaPredicted RBP10.1□□□□□ -0.79
SCARB2-220ENST00000640076 TFIP11Q9UBB9 837 aaKnown RBP10.1□□□□□ -0.79
SCARB2-220ENST00000640076 BTAF1O14981 1849 aa10.1□□□□□ -0.79
SCARB2-220ENST00000640076 LAMB4A4D0S4 1761 aa10.1□□□□□ -0.79
SCARB2-220ENST00000640076 EIF2S2P20042 333 aaKnown RBP10.1□□□□□ -0.79
SCARB2-220ENST00000640076 FAM196AQ6ZSG2 479 aa10.1□□□□□ -0.79
SCARB2-220ENST00000640076 STK31Q9BXU1 1019 aa10.1□□□□□ -0.79
SCARB2-220ENST00000640076 CHADLQ6NUI6 762 aa10.09□□□□□ -0.79
SCARB2-220ENST00000640076 ZNF710Q8N1W2 664 aa10.09□□□□□ -0.79
SCARB2-220ENST00000640076 GIPC2Q8TF65 315 aa10.09□□□□□ -0.79
SCARB2-220ENST00000640076 ZNF592Q92610 1267 aa10.09□□□□□ -0.79
SCARB2-220ENST00000640076 ALG2Q9H553 416 aa10.09□□□□□ -0.79
SCARB2-220ENST00000640076 NOB1Q9ULX3 412 aaKnown RBP10.09□□□□□ -0.79
SCARB2-220ENST00000640076 USP16Q9Y5T5 823 aa10.09□□□□□ -0.79
SCARB2-220ENST00000640076 NDUFB9Q9Y6M9 179 aa10.09□□□□□ -0.79
SCARB2-220ENST00000640076 IRX6P78412 446 aaPredicted RBP10.08□□□□□ -0.8
SCARB2-220ENST00000640076 ZKSCAN2Q63HK3 967 aa10.08□□□□□ -0.8
SCARB2-220ENST00000640076 METTL3Q86U44 580 aaKnown RBP10.08□□□□□ -0.8
SCARB2-220ENST00000640076 SMARCC1Q92922 1105 aaPredicted RBP10.08□□□□□ -0.8
SCARB2-220ENST00000640076 RBM42Q9BTD8 480 aaKnown RBP10.08□□□□□ -0.8
SCARB2-220ENST00000640076 CHPF2Q9P2E5 772 aa10.08□□□□□ -0.8
SCARB2-220ENST00000640076 PALLDQ8WX93 1383 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms