RNA–Protein interactions for RNA: ENST00000640039.1

SPIN3-233, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-233ENST00000640039 ZNF622Q969S3 477 aaKnown RBP eCLIP20.27■□□□□ 0.84
SPIN3-233ENST00000640039 RNF123Q5XPI4 1314 aa20.27■□□□□ 0.83
SPIN3-233ENST00000640039 FLIIQ13045 1269 aa20.26■□□□□ 0.83
SPIN3-233ENST00000640039 ABCC12Q96J65 1359 aa20.25■□□□□ 0.83
SPIN3-233ENST00000640039 ATP5J2-PTCD1G3V325 749 aa20.25■□□□□ 0.83
SPIN3-233ENST00000640039 FKBP5Q13451 457 aaPredicted RBP20.25■□□□□ 0.83
SPIN3-233ENST00000640039 KSR2Q6VAB6 950 aa20.25■□□□□ 0.83
SPIN3-233ENST00000640039 G2E3Q7L622 706 aa20.25■□□□□ 0.83
SPIN3-233ENST00000640039 TTLL6Q8N841 843 aa20.25■□□□□ 0.83
SPIN3-233ENST00000640039 ISCA1Q9BUE6 129 aa20.25■□□□□ 0.83
SPIN3-233ENST00000640039 TRMT112Q9UI30 125 aaKnown RBP20.25■□□□□ 0.83
SPIN3-233ENST00000640039 MAP3K2Q9Y2U5 619 aa20.25■□□□□ 0.83
SPIN3-233ENST00000640039 COL11A2P13942 1736 aaPredicted RBP20.24■□□□□ 0.83
SPIN3-233ENST00000640039 PI4KAP2A4QPH2 592 aa20.24■□□□□ 0.83
SPIN3-233ENST00000640039 NEXNQ0ZGT2 675 aa20.24■□□□□ 0.83
SPIN3-233ENST00000640039 PI4KAP1Q8N8J0 262 aa20.24■□□□□ 0.83
SPIN3-233ENST00000640039 MASTLQ96GX5 879 aa20.24■□□□□ 0.83
SPIN3-233ENST00000640039 MYD88Q99836 296 aa20.24■□□□□ 0.83
SPIN3-233ENST00000640039 METTL22Q9BUU2 404 aaPredicted RBP20.24■□□□□ 0.83
SPIN3-233ENST00000640039 ARFGEF1Q9Y6D6 1849 aa20.23■□□□□ 0.83
SPIN3-233ENST00000640039 SRGNP10124 158 aa20.23■□□□□ 0.83
SPIN3-233ENST00000640039 RIC1Q4ADV7 1423 aa20.23■□□□□ 0.83
SPIN3-233ENST00000640039 STYK1Q6J9G0 422 aa20.23■□□□□ 0.83
SPIN3-233ENST00000640039 TRMT2AQ8IZ69 625 aaKnown RBP20.23■□□□□ 0.83
SPIN3-233ENST00000640039 CNKSR1Q969H4 720 aa20.23■□□□□ 0.83
SPIN3-233ENST00000640039 GPBP1L1Q9HC44 474 aaPredicted RBP20.23■□□□□ 0.83
SPIN3-233ENST00000640039 SH3TC1Q8TE82 1336 aa20.23■□□□□ 0.83
SPIN3-233ENST00000640039 NPR1P16066 1061 aa20.22■□□□□ 0.83
SPIN3-233ENST00000640039 TRIM28Q13263 835 aaKnown RBP20.22■□□□□ 0.83
SPIN3-233ENST00000640039 ZNF428Q96B54 188 aa20.22■□□□□ 0.83
SPIN3-233ENST00000640039 KLRG2A4D1S0 409 aaPredicted RBP20.21■□□□□ 0.83
SPIN3-233ENST00000640039 RPGRQ92834 1020 aaKnown RBP20.21■□□□□ 0.83
SPIN3-233ENST00000640039 NLRP3Q96P20 1036 aa20.21■□□□□ 0.83
SPIN3-233ENST00000640039 TNRC6CQ9HCJ0 1690 aaKnown RBP20.21■□□□□ 0.83
SPIN3-233ENST00000640039 CT47B1P0C2W7 299 aaPredicted RBP20.2■□□□□ 0.82
SPIN3-233ENST00000640039 ARHGAP27Q6ZUM4 889 aa20.2■□□□□ 0.82
SPIN3-233ENST00000640039 CCDC191Q8NCU4 936 aa20.2■□□□□ 0.82
SPIN3-233ENST00000640039 CWC25Q9NXE8 425 aaPredicted RBP20.2■□□□□ 0.82
SPIN3-233ENST00000640039 SLC10A5Q5PT55 438 aa20.19■□□□□ 0.82
SPIN3-233ENST00000640039 ZNF526Q8TF50 670 aaPredicted RBP20.19■□□□□ 0.82
SPIN3-233ENST00000640039 CACNA1SQ13698 1873 aa20.19■□□□□ 0.82
SPIN3-233ENST00000640039 HCLS1P14317 486 aaPredicted RBP20.18■□□□□ 0.82
SPIN3-233ENST00000640039 ALDH1B1P30837 517 aa20.18■□□□□ 0.82
SPIN3-233ENST00000640039 CRY2Q49AN0 593 aa20.18■□□□□ 0.82
SPIN3-233ENST00000640039 DNAAF4Q8WXU2 420 aa20.18■□□□□ 0.82
SPIN3-233ENST00000640039 FAM89AQ96GI7 184 aa20.18■□□□□ 0.82
SPIN3-233ENST00000640039 ZBED9Q6R2W3 1325 aa20.18■□□□□ 0.82
SPIN3-233ENST00000640039 HSP90B1P14625 803 aaKnown RBP20.17■□□□□ 0.82
SPIN3-233ENST00000640039 RTL5Q5HYW3 569 aaPredicted RBP20.17■□□□□ 0.82
SPIN3-233ENST00000640039 PRPF40BQ6NWY9 871 aaKnown RBP20.17■□□□□ 0.82
SPIN3-233ENST00000640039 ZBTB38Q8NAP3 1195 aaPredicted RBP20.17■□□□□ 0.82
SPIN3-233ENST00000640039 KIF3CO14782 793 aa20.16■□□□□ 0.82
SPIN3-233ENST00000640039 ALDH1L2Q3SY69 923 aa20.16■□□□□ 0.82
SPIN3-233ENST00000640039 SYNE4Q8N205 404 aa20.16■□□□□ 0.82
SPIN3-233ENST00000640039 SSH1Q8WYL5 1049 aa20.16■□□□□ 0.82
SPIN3-233ENST00000640039 RBM17Q96I25 401 aaKnown RBP20.16■□□□□ 0.82
SPIN3-233ENST00000640039 ZNF219Q9P2Y4 722 aaPredicted RBP20.16■□□□□ 0.82
SPIN3-233ENST00000640039 C21orf2O43822 256 aa20.15■□□□□ 0.82
SPIN3-233ENST00000640039 IGKV5-2P06315 115 aa20.15■□□□□ 0.82
SPIN3-233ENST00000640039 SOGA3Q5TF21 947 aa20.15■□□□□ 0.82
SPIN3-233ENST00000640039 MRPL50Q8N5N7 158 aaKnown RBP20.15■□□□□ 0.82
SPIN3-233ENST00000640039 BCL2L13Q9BXK5 485 aa20.15■□□□□ 0.82
SPIN3-233ENST00000640039 SMC4Q9NTJ3 1288 aa20.15■□□□□ 0.82
SPIN3-233ENST00000640039 CEP350Q5VT06 3117 aa20.15■□□□□ 0.82
SPIN3-233ENST00000640039 SLX4Q8IY92 1834 aa20.14■□□□□ 0.81
SPIN3-233ENST00000640039 NEURL1BA8MQ27 555 aa20.14■□□□□ 0.81
SPIN3-233ENST00000640039 F6X3S4 739 aa20.14■□□□□ 0.81
SPIN3-233ENST00000640039 IRS4O14654 1257 aaPredicted RBP20.14■□□□□ 0.81
SPIN3-233ENST00000640039 PCCAP05165 728 aaPredicted RBP20.14■□□□□ 0.81
SPIN3-233ENST00000640039 CWF19L2Q2TBE0 894 aaKnown RBP20.14■□□□□ 0.81
SPIN3-233ENST00000640039 PTPRCP08575 1304 aa20.13■□□□□ 0.81
SPIN3-233ENST00000640039 HOXA10P31260 410 aaPredicted RBP20.13■□□□□ 0.81
SPIN3-233ENST00000640039 C3orf67Q6ZVT6 689 aa20.13■□□□□ 0.81
SPIN3-233ENST00000640039 LINS1Q8NG48 757 aa20.13■□□□□ 0.81
SPIN3-233ENST00000640039 LAMB2P55268 1798 aa20.13■□□□□ 0.81
SPIN3-233ENST00000640039 DDX60Q8IY21 1712 aaKnown RBP20.13■□□□□ 0.81
SPIN3-233ENST00000640039 CRAMP1Q96RY5 1269 aa20.12■□□□□ 0.81
SPIN3-233ENST00000640039 SLC4A10Q6U841 1118 aa20.11■□□□□ 0.81
SPIN3-233ENST00000640039 DDX46Q7L014 1031 aaKnown RBP20.11■□□□□ 0.81
SPIN3-233ENST00000640039 HSPA6P17066 643 aa20.1■□□□□ 0.81
SPIN3-233ENST00000640039 GCKRQ14397 625 aa20.1■□□□□ 0.81
SPIN3-233ENST00000640039 CCDC93Q567U6 631 aa20.1■□□□□ 0.81
SPIN3-233ENST00000640039 JARID2Q92833 1246 aaPredicted RBP20.1■□□□□ 0.81
SPIN3-233ENST00000640039 CDHR2Q9BYE9 1310 aa20.09■□□□□ 0.81
SPIN3-233ENST00000640039 PDE8AO60658 829 aa20.09■□□□□ 0.81
SPIN3-233ENST00000640039 UBE3BQ7Z3V4 1068 aa20.09■□□□□ 0.81
SPIN3-233ENST00000640039 TMX4Q9H1E5 349 aaPredicted RBP20.09■□□□□ 0.81
SPIN3-233ENST00000640039 ABCC4O15439 1325 aa20.08■□□□□ 0.81
SPIN3-233ENST00000640039 PPEF1O14829 653 aaPredicted RBP20.08■□□□□ 0.81
SPIN3-233ENST00000640039 RARSP54136 660 aaKnown RBP20.08■□□□□ 0.81
SPIN3-233ENST00000640039 RASSF7Q02833 373 aa20.08■□□□□ 0.81
SPIN3-233ENST00000640039 SF3B3Q15393 1217 aaKnown RBP20.08■□□□□ 0.81
SPIN3-233ENST00000640039 BEND3Q5T5X7 828 aa20.08■□□□□ 0.81
SPIN3-233ENST00000640039 CCDC152Q4G0S7 254 aa20.07■□□□□ 0.8
SPIN3-233ENST00000640039 CC2D2BQ6DHV5 1058 aa20.07■□□□□ 0.8
SPIN3-233ENST00000640039 RTKN2Q8IZC4 609 aa20.07■□□□□ 0.8
SPIN3-233ENST00000640039 C7orf43Q8WVR3 580 aa20.07■□□□□ 0.8
SPIN3-233ENST00000640039 SRCIN1Q9C0H9 1055 aa20.07■□□□□ 0.8
SPIN3-233ENST00000640039 TAOK3Q9H2K8 898 aa20.07■□□□□ 0.8
SPIN3-233ENST00000640039 H7C1W4 665 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms