RNA–Protein interactions for RNA: ENST00000639916.1

PAX6-259, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-259ENST00000639916 ALS2Q96Q42 1657 aa10.76□□□□□ -0.69
PAX6-259ENST00000639916 GYS2P54840 703 aa10.76□□□□□ -0.69
PAX6-259ENST00000639916 TMED8Q6PL24 325 aaPredicted RBP10.76□□□□□ -0.69
PAX6-259ENST00000639916 NLRP2Q9NX02 1062 aa10.76□□□□□ -0.69
PAX6-259ENST00000639916 ADCY5O95622 1261 aa10.75□□□□□ -0.69
PAX6-259ENST00000639916 HSP90B1P14625 803 aaKnown RBP10.75□□□□□ -0.69
PAX6-259ENST00000639916 CTR9Q6PD62 1173 aa10.75□□□□□ -0.69
PAX6-259ENST00000639916 NFATC2IPQ8NCF5 419 aa10.75□□□□□ -0.69
PAX6-259ENST00000639916 PHAXQ9H814 394 aaKnown RBP10.75□□□□□ -0.69
PAX6-259ENST00000639916 CHAMP1Q96JM3 812 aa10.75□□□□□ -0.69
PAX6-259ENST00000639916 CEP83Q9Y592 693 aa10.75□□□□□ -0.69
PAX6-259ENST00000639916 PXDNQ92626 1479 aa10.75□□□□□ -0.69
PAX6-259ENST00000639916 RGPD5Q99666 1765 aa10.75□□□□□ -0.69
PAX6-259ENST00000639916 APBB1O00213 710 aa10.74□□□□□ -0.69
PAX6-259ENST00000639916 HMMRO75330 724 aa10.74□□□□□ -0.69
PAX6-259ENST00000639916 GNAI2P04899 355 aa10.74□□□□□ -0.69
PAX6-259ENST00000639916 GRIPAP1Q4V328 841 aa10.74□□□□□ -0.69
PAX6-259ENST00000639916 RAPGEF4Q8WZA2 1011 aa10.74□□□□□ -0.69
PAX6-259ENST00000639916 KCNF1Q9H3M0 494 aa10.74□□□□□ -0.69
PAX6-259ENST00000639916 ZNF446Q9NWS9 450 aa10.74□□□□□ -0.69
PAX6-259ENST00000639916 LMO7Q8WWI1 1683 aa10.74□□□□□ -0.69
PAX6-259ENST00000639916 FAM208AQ9UK61 1670 aaKnown RBP10.74□□□□□ -0.69
PAX6-259ENST00000639916 CACNA1FO60840 1977 aa10.74□□□□□ -0.69
PAX6-259ENST00000639916 REC8O95072 547 aa10.74□□□□□ -0.69
PAX6-259ENST00000639916 HOXB7P09629 217 aa10.74□□□□□ -0.69
PAX6-259ENST00000639916 GUCY2CP25092 1073 aa10.74□□□□□ -0.69
PAX6-259ENST00000639916 KMT5BQ4FZB7 885 aa10.74□□□□□ -0.69
PAX6-259ENST00000639916 PLEKHM2Q8IWE5 1019 aa10.74□□□□□ -0.69
PAX6-259ENST00000639916 HOMEZQ8IX15 550 aa10.74□□□□□ -0.69
PAX6-259ENST00000639916 C16orf71Q8IYS4 520 aaPredicted RBP10.74□□□□□ -0.69
PAX6-259ENST00000639916 GNAI3P08754 354 aa10.73□□□□□ -0.69
PAX6-259ENST00000639916 CSB-PGBD3P0DP91 1061 aa10.73□□□□□ -0.69
PAX6-259ENST00000639916 RBM6P78332 1123 aaKnown RBP10.73□□□□□ -0.69
PAX6-259ENST00000639916 CHRNA2Q15822 529 aa10.73□□□□□ -0.69
PAX6-259ENST00000639916 UVSSAQ2YD98 709 aa10.73□□□□□ -0.69
PAX6-259ENST00000639916 NOL10Q9BSC4 688 aaKnown RBP10.73□□□□□ -0.69
PAX6-259ENST00000639916 CHPF2Q9P2E5 772 aa10.73□□□□□ -0.69
PAX6-259ENST00000639916 SPATA31A3Q5VYP0 1347 aa10.73□□□□□ -0.69
PAX6-259ENST00000639916 TNS3Q68CZ2 1445 aa10.73□□□□□ -0.69
PAX6-259ENST00000639916 TRIM66O15016 1216 aa10.73□□□□□ -0.69
PAX6-259ENST00000639916 MBD3O95983 291 aa10.73□□□□□ -0.69
PAX6-259ENST00000639916 CCDC172P0C7W6 258 aa10.73□□□□□ -0.69
PAX6-259ENST00000639916 EGFL6Q8IUX8 553 aa10.73□□□□□ -0.69
PAX6-259ENST00000639916 BRMS1Q9HCU9 246 aa10.73□□□□□ -0.69
PAX6-259ENST00000639916 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.73□□□□□ -0.69
PAX6-259ENST00000639916 SMTNL1A8MU46 457 aa10.72□□□□□ -0.69
PAX6-259ENST00000639916 SMARCA5O60264 1052 aaPredicted RBP10.72□□□□□ -0.69
PAX6-259ENST00000639916 CASQ1P31415 396 aa10.72□□□□□ -0.69
PAX6-259ENST00000639916 ZNF397Q8NF99 534 aaPredicted RBP10.72□□□□□ -0.69
PAX6-259ENST00000639916 SYT10Q6XYQ8 523 aa10.72□□□□□ -0.69
PAX6-259ENST00000639916 BRINP3Q76B58 766 aa10.72□□□□□ -0.69
PAX6-259ENST00000639916 C10orf67Q8IYJ2 551 aa10.72□□□□□ -0.69
PAX6-259ENST00000639916 KIF1BPQ96EK5 621 aa10.72□□□□□ -0.69
PAX6-259ENST00000639916 TOMM22Q9NS69 142 aa10.72□□□□□ -0.69
PAX6-259ENST00000639916 ZDHHC9Q9Y397 364 aa10.72□□□□□ -0.69
PAX6-259ENST00000639916 MYO1CO00159 1063 aa10.71□□□□□ -0.69
PAX6-259ENST00000639916 TATP17735 454 aaPredicted RBP10.71□□□□□ -0.69
PAX6-259ENST00000639916 MUM1L1Q5H9M0 696 aa10.71□□□□□ -0.69
PAX6-259ENST00000639916 GPATCH11Q8N954 259 aa10.71□□□□□ -0.69
PAX6-259ENST00000639916 FAM184AQ8NB25 1140 aa10.71□□□□□ -0.69
PAX6-259ENST00000639916 OTUD7AQ8TE49 926 aaPredicted RBP10.71□□□□□ -0.69
PAX6-259ENST00000639916 USP44Q9H0E7 712 aa10.71□□□□□ -0.69
PAX6-259ENST00000639916 CAMTA1Q9Y6Y1 1673 aa10.71□□□□□ -0.69
PAX6-259ENST00000639916 ZNF335Q9H4Z2 1342 aaPredicted RBP10.71□□□□□ -0.69
PAX6-259ENST00000639916 KDM3BQ7LBC6 1761 aa10.71□□□□□ -0.69
PAX6-259ENST00000639916 ANXA1P04083 346 aa10.71□□□□□ -0.69
PAX6-259ENST00000639916 GIGYF1O75420 1035 aaPredicted RBP10.71□□□□□ -0.7
PAX6-259ENST00000639916 GSPT1P15170 499 aaKnown RBP10.71□□□□□ -0.7
PAX6-259ENST00000639916 TBC1D9Q6ZT07 1266 aa10.71□□□□□ -0.7
PAX6-259ENST00000639916 LRRFIP2Q9Y608 721 aaKnown RBP10.71□□□□□ -0.7
PAX6-259ENST00000639916 OVOS2A0A0G2JMS6 1433 aa10.7□□□□□ -0.7
PAX6-259ENST00000639916 PI4KAP2A4QPH2 592 aa10.7□□□□□ -0.7
PAX6-259ENST00000639916 UBTFL1P0CB47 393 aaPredicted RBP10.7□□□□□ -0.7
PAX6-259ENST00000639916 ATP8B2P98198 1209 aa10.7□□□□□ -0.7
PAX6-259ENST00000639916 PI4KAP1Q8N8J0 262 aa10.7□□□□□ -0.7
PAX6-259ENST00000639916 SRCIN1Q9C0H9 1055 aa10.7□□□□□ -0.7
PAX6-259ENST00000639916 SLAIN2Q9P270 581 aa10.7□□□□□ -0.7
PAX6-259ENST00000639916 DBF4Q9UBU7 674 aaPredicted RBP10.7□□□□□ -0.7
PAX6-259ENST00000639916 LCMT1Q9UIC8 334 aa10.7□□□□□ -0.7
PAX6-259ENST00000639916 SPG7Q9UQ90 795 aa10.7□□□□□ -0.7
PAX6-259ENST00000639916 U3KPZ7 1027 aaPredicted RBP10.7□□□□□ -0.7
PAX6-259ENST00000639916 PNMA6EA0A0J9YXQ4 647 aa10.7□□□□□ -0.7
PAX6-259ENST00000639916 TTC22Q5TAA0 569 aa10.7□□□□□ -0.7
PAX6-259ENST00000639916 NEK11Q8NG66 645 aa10.7□□□□□ -0.7
PAX6-259ENST00000639916 EXOC6BQ9Y2D4 811 aa10.7□□□□□ -0.7
PAX6-259ENST00000639916 RAD50Q92878 1312 aa10.69□□□□□ -0.7
PAX6-259ENST00000639916 PRAMEF22A3QJZ6 481 aa10.69□□□□□ -0.7
PAX6-259ENST00000639916 FBXO38Q6PIJ6 1188 aa10.69□□□□□ -0.7
PAX6-259ENST00000639916 DNAAF4Q8WXU2 420 aa10.69□□□□□ -0.7
PAX6-259ENST00000639916 ATG3Q9NT62 314 aa10.69□□□□□ -0.7
PAX6-259ENST00000639916 PXDNLA1KZ92 1463 aa10.69□□□□□ -0.7
PAX6-259ENST00000639916 XIRP1Q702N8 1843 aaKnown RBP10.69□□□□□ -0.7
PAX6-259ENST00000639916 GOLGA6L6A8MZA4 724 aa10.69□□□□□ -0.7
PAX6-259ENST00000639916 CDC45O75419 566 aa10.69□□□□□ -0.7
PAX6-259ENST00000639916 PHF14O94880 888 aa10.69□□□□□ -0.7
PAX6-259ENST00000639916 PHKG2P15735 406 aa10.69□□□□□ -0.7
PAX6-259ENST00000639916 TSGA10IPQ3SY00 556 aa10.69□□□□□ -0.7
PAX6-259ENST00000639916 C16orf45Q96MC5 204 aaPredicted RBP10.69□□□□□ -0.7
PAX6-259ENST00000639916 CWC22Q9HCG8 908 aaKnown RBP10.69□□□□□ -0.7
PAX6-259ENST00000639916 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms