RNA–Protein interactions for RNA: ENST00000639000.1

SPIN3-217, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,055 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-217ENST00000639000 RBM8AQ9Y5S9 174 aaKnown RBP19.44■□□□□ 0.7
SPIN3-217ENST00000639000 HIP1O00291 1037 aa19.44■□□□□ 0.7
SPIN3-217ENST00000639000 LETM1O95202 739 aaPredicted RBP19.44■□□□□ 0.7
SPIN3-217ENST00000639000 DDX58O95786 925 aaKnown RBP19.44■□□□□ 0.7
SPIN3-217ENST00000639000 G3BP1Q13283 466 aaKnown RBP eCLIP19.44■□□□□ 0.7
SPIN3-217ENST00000639000 ME3Q16798 604 aa19.44■□□□□ 0.7
SPIN3-217ENST00000639000 KLHL34Q8N239 644 aa19.43■□□□□ 0.7
SPIN3-217ENST00000639000 CCDC8Q9H0W5 538 aaPredicted RBP19.43■□□□□ 0.7
SPIN3-217ENST00000639000 MRC1P22897 1456 aa19.42■□□□□ 0.7
SPIN3-217ENST00000639000 TLR7Q9NYK1 1049 aaKnown RBP19.42■□□□□ 0.7
SPIN3-217ENST00000639000 TRPM3Q9HCF6 1732 aaPredicted RBP19.42■□□□□ 0.7
SPIN3-217ENST00000639000 HSP90AA2PQ14568 343 aaPredicted RBP19.42■□□□□ 0.7
SPIN3-217ENST00000639000 SLC27A2O14975 620 aa19.41■□□□□ 0.7
SPIN3-217ENST00000639000 ZKSCAN1P17029 563 aaPredicted RBP19.41■□□□□ 0.7
SPIN3-217ENST00000639000 FUCA2Q9BTY2 467 aa19.41■□□□□ 0.7
SPIN3-217ENST00000639000 TPCN1Q9ULQ1 816 aa19.41■□□□□ 0.7
SPIN3-217ENST00000639000 MED23Q9ULK4 1368 aa19.41■□□□□ 0.7
SPIN3-217ENST00000639000 FIBPO43427 364 aa19.4■□□□□ 0.7
SPIN3-217ENST00000639000 AIMP1Q12904 312 aaKnown RBP19.4■□□□□ 0.7
SPIN3-217ENST00000639000 COL9A3Q14050 684 aaPredicted RBP19.4■□□□□ 0.7
SPIN3-217ENST00000639000 JCADQ9P266 1359 aa19.4■□□□□ 0.7
SPIN3-217ENST00000639000 A0A0D9SFI3 127 aa19.4■□□□□ 0.7
SPIN3-217ENST00000639000 NEURL1BA8MQ27 555 aa19.4■□□□□ 0.7
SPIN3-217ENST00000639000 DNM1Q05193 864 aaKnown RBP19.4■□□□□ 0.7
SPIN3-217ENST00000639000 ZNF790Q6PG37 636 aa19.4■□□□□ 0.7
SPIN3-217ENST00000639000 LARP1Q6PKG0 1096 aaKnown RBP19.4■□□□□ 0.7
SPIN3-217ENST00000639000 DDX54Q8TDD1 881 aaKnown RBP19.4■□□□□ 0.7
SPIN3-217ENST00000639000 MST1RQ04912 1400 aa19.4■□□□□ 0.7
SPIN3-217ENST00000639000 DTNBO60941 627 aa19.39■□□□□ 0.69
SPIN3-217ENST00000639000 CSPP1Q1MSJ5 1256 aa19.39■□□□□ 0.69
SPIN3-217ENST00000639000 NECAB1Q8N987 351 aa19.39■□□□□ 0.69
SPIN3-217ENST00000639000 ALDH8A1Q9H2A2 487 aaPredicted RBP19.39■□□□□ 0.69
SPIN3-217ENST00000639000 EPHA10Q5JZY3 1008 aa19.39■□□□□ 0.69
SPIN3-217ENST00000639000 RIC3Q7Z5B4 369 aa19.39■□□□□ 0.69
SPIN3-217ENST00000639000 BOLA2Q9H3K6 86 aa19.39■□□□□ 0.69
SPIN3-217ENST00000639000 R3HCC1Q9Y3T6 440 aaKnown RBP19.39■□□□□ 0.69
SPIN3-217ENST00000639000 KDM6AO15550 1401 aaPredicted RBP19.39■□□□□ 0.69
SPIN3-217ENST00000639000 ERBB3P21860 1342 aa19.38■□□□□ 0.69
SPIN3-217ENST00000639000 PSMA5P28066 241 aa19.38■□□□□ 0.69
SPIN3-217ENST00000639000 SLC39A6Q13433 755 aa19.38■□□□□ 0.69
SPIN3-217ENST00000639000 GCKRQ14397 625 aa19.38■□□□□ 0.69
SPIN3-217ENST00000639000 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.38■□□□□ 0.69
SPIN3-217ENST00000639000 KRT28Q7Z3Y7 464 aa19.37■□□□□ 0.69
SPIN3-217ENST00000639000 LRP10Q7Z4F1 713 aa19.37■□□□□ 0.69
SPIN3-217ENST00000639000 METTL22Q9BUU2 404 aaPredicted RBP19.37■□□□□ 0.69
SPIN3-217ENST00000639000 SLC52A2Q9HAB3 445 aa19.37■□□□□ 0.69
SPIN3-217ENST00000639000 C5P01031 1676 aa19.37■□□□□ 0.69
SPIN3-217ENST00000639000 TSGA10IPQ3SY00 556 aa19.37■□□□□ 0.69
SPIN3-217ENST00000639000 KLHDC4Q8TBB5 520 aa19.37■□□□□ 0.69
SPIN3-217ENST00000639000 XAGE3Q8WTP9 111 aa19.37■□□□□ 0.69
SPIN3-217ENST00000639000 SIL1Q9H173 461 aa19.37■□□□□ 0.69
SPIN3-217ENST00000639000 HCLS1P14317 486 aaPredicted RBP19.36■□□□□ 0.69
SPIN3-217ENST00000639000 LMOD2Q6P5Q4 547 aa19.36■□□□□ 0.69
SPIN3-217ENST00000639000 FSD1Q9BTV5 496 aa19.36■□□□□ 0.69
SPIN3-217ENST00000639000 USP25Q9UHP3 1055 aa19.36■□□□□ 0.69
SPIN3-217ENST00000639000 TAF6LQ9Y6J9 622 aa19.36■□□□□ 0.69
SPIN3-217ENST00000639000 NPHP3Q7Z494 1330 aa19.36■□□□□ 0.69
SPIN3-217ENST00000639000 KCNJ4P48050 445 aa19.36■□□□□ 0.69
SPIN3-217ENST00000639000 RFX5P48382 616 aaPredicted RBP19.36■□□□□ 0.69
SPIN3-217ENST00000639000 PTMAP06454 111 aaKnown RBP19.35■□□□□ 0.69
SPIN3-217ENST00000639000 PDIA4P13667 645 aaKnown RBP19.35■□□□□ 0.69
SPIN3-217ENST00000639000 RPS6KB1P23443 525 aa19.35■□□□□ 0.69
SPIN3-217ENST00000639000 COPS6Q7L5N1 327 aa19.35■□□□□ 0.69
SPIN3-217ENST00000639000 ZNF589Q86UQ0 364 aaPredicted RBP19.35■□□□□ 0.69
SPIN3-217ENST00000639000 COPRSQ9NQ92 184 aa19.35■□□□□ 0.69
SPIN3-217ENST00000639000 RGPD5Q99666 1765 aa19.35■□□□□ 0.69
SPIN3-217ENST00000639000 VPS37CA5D8V6 355 aaPredicted RBP19.34■□□□□ 0.69
SPIN3-217ENST00000639000 NEXNQ0ZGT2 675 aa19.34■□□□□ 0.69
SPIN3-217ENST00000639000 GIMAP6Q6P9H5 292 aa19.34■□□□□ 0.69
SPIN3-217ENST00000639000 MYD88Q99836 296 aa19.34■□□□□ 0.69
SPIN3-217ENST00000639000 TAF5LO75529 589 aa19.34■□□□□ 0.69
SPIN3-217ENST00000639000 ADCY5O95622 1261 aa19.34■□□□□ 0.69
SPIN3-217ENST00000639000 MYL6BP14649 208 aa19.34■□□□□ 0.69
SPIN3-217ENST00000639000 PHKG2P15735 406 aa19.34■□□□□ 0.69
SPIN3-217ENST00000639000 TOB2Q14106 344 aaPredicted RBP19.34■□□□□ 0.69
SPIN3-217ENST00000639000 ANKRD1Q15327 319 aa19.34■□□□□ 0.69
SPIN3-217ENST00000639000 USPL1Q5W0Q7 1092 aa19.34■□□□□ 0.69
SPIN3-217ENST00000639000 BLOC1S2Q6QNY1 142 aa19.34■□□□□ 0.69
SPIN3-217ENST00000639000 SCN11AQ9UI33 1791 aa19.34■□□□□ 0.69
SPIN3-217ENST00000639000 KDM4AO75164 1064 aa19.33■□□□□ 0.69
SPIN3-217ENST00000639000 HSPA2P54652 639 aa19.33■□□□□ 0.69
SPIN3-217ENST00000639000 RNF20Q5VTR2 975 aa19.33■□□□□ 0.69
SPIN3-217ENST00000639000 LARP1BQ659C4 914 aaKnown RBP19.33■□□□□ 0.69
SPIN3-217ENST00000639000 COL15A1P39059 1388 aa19.33■□□□□ 0.68
SPIN3-217ENST00000639000 ATP5JP18859 108 aa19.32■□□□□ 0.68
SPIN3-217ENST00000639000 KIAA2012Q0VF49 1180 aa19.32■□□□□ 0.68
SPIN3-217ENST00000639000 TPRNQ4KMQ1 711 aa19.32■□□□□ 0.68
SPIN3-217ENST00000639000 CDC37L1Q7L3B6 337 aa19.32■□□□□ 0.68
SPIN3-217ENST00000639000 TTC6Q86TZ1 520 aa19.32■□□□□ 0.68
SPIN3-217ENST00000639000 NFATC2IPQ8NCF5 419 aa19.32■□□□□ 0.68
SPIN3-217ENST00000639000 ZNF496Q96IT1 587 aaPredicted RBP19.32■□□□□ 0.68
SPIN3-217ENST00000639000 HMG20BQ9P0W2 317 aa19.32■□□□□ 0.68
SPIN3-217ENST00000639000 C1orf167Q5SNV9 1468 aa19.32■□□□□ 0.68
SPIN3-217ENST00000639000 RAPGEF4Q8WZA2 1011 aa19.32■□□□□ 0.68
SPIN3-217ENST00000639000 ELP1O95163 1332 aa19.32■□□□□ 0.68
SPIN3-217ENST00000639000 PTPN12Q05209 780 aaKnown RBP19.31■□□□□ 0.68
SPIN3-217ENST00000639000 RABL6Q3YEC7 729 aaPredicted RBP19.31■□□□□ 0.68
SPIN3-217ENST00000639000 EDC3Q96F86 508 aaKnown RBP19.31■□□□□ 0.68
SPIN3-217ENST00000639000 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.31■□□□□ 0.681e-6■□□□□ 10.8
SPIN3-217ENST00000639000 DBNLQ9UJU6 430 aaKnown RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms