RNA–Protein interactions for RNA: ENST00000638940.1

SPIN3-216, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,785 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-216ENST00000638940 CCDC191Q8NCU4 936 aa12.88□□□□□ -0.35
SPIN3-216ENST00000638940 STRN4Q9NRL3 753 aa12.88□□□□□ -0.35
SPIN3-216ENST00000638940 COL16A1Q07092 1604 aaPredicted RBP12.88□□□□□ -0.35
SPIN3-216ENST00000638940 A0A087WZG4 1122 aa12.87□□□□□ -0.35
SPIN3-216ENST00000638940 IL25Q9H293 177 aa12.87□□□□□ -0.35
SPIN3-216ENST00000638940 DIAPH3Q9NSV4 1193 aa12.87□□□□□ -0.35
SPIN3-216ENST00000638940 L1TD1Q5T7N2 865 aaKnown RBP12.87□□□□□ -0.35
SPIN3-216ENST00000638940 CWC25Q9NXE8 425 aaPredicted RBP12.87□□□□□ -0.35
SPIN3-216ENST00000638940 TMOD3Q9NYL9 352 aa12.87□□□□□ -0.35
SPIN3-216ENST00000638940 ISY1Q9ULR0 285 aaKnown RBP12.87□□□□□ -0.35
SPIN3-216ENST00000638940 GOLGA6L22H0YM25 854 aa12.86□□□□□ -0.35
SPIN3-216ENST00000638940 MAP4K4O95819 1239 aaPredicted RBP12.86□□□□□ -0.35
SPIN3-216ENST00000638940 UBE3BQ7Z3V4 1068 aa12.86□□□□□ -0.35
SPIN3-216ENST00000638940 TMX3Q96JJ7 454 aa12.86□□□□□ -0.35
SPIN3-216ENST00000638940 ATG3Q9NT62 314 aa12.86□□□□□ -0.35
SPIN3-216ENST00000638940 SSFA2P28290 1259 aa12.86□□□□□ -0.35
SPIN3-216ENST00000638940 DDX54Q8TDD1 881 aaKnown RBP12.86□□□□□ -0.35
SPIN3-216ENST00000638940 GPR108Q9NPR9 543 aa12.86□□□□□ -0.35
SPIN3-216ENST00000638940 FOXD4L1Q9NU39 408 aa12.86□□□□□ -0.35
SPIN3-216ENST00000638940 ATP5JP18859 108 aa12.86□□□□□ -0.35
SPIN3-216ENST00000638940 FOXO4P98177 505 aa12.86□□□□□ -0.35
SPIN3-216ENST00000638940 TRIM28Q13263 835 aaKnown RBP12.86□□□□□ -0.35
SPIN3-216ENST00000638940 TM6SF1Q9BZW5 370 aa12.85□□□□□ -0.35
SPIN3-216ENST00000638940 SNX14Q9Y5W7 946 aa12.85□□□□□ -0.35
SPIN3-216ENST00000638940 BAG4O95429 457 aaKnown RBP12.85□□□□□ -0.35
SPIN3-216ENST00000638940 PIP4K2AP48426 406 aaPredicted RBP12.85□□□□□ -0.35
SPIN3-216ENST00000638940 CWC27Q6UX04 472 aaKnown RBP12.85□□□□□ -0.35
SPIN3-216ENST00000638940 TTLL7Q6ZT98 887 aa12.85□□□□□ -0.35
SPIN3-216ENST00000638940 ISCA1Q9BUE6 129 aa12.85□□□□□ -0.35
SPIN3-216ENST00000638940 BTG4Q9NY30 223 aa12.85□□□□□ -0.35
SPIN3-216ENST00000638940 ATP5J2-PTCD1G3V325 749 aa12.84□□□□□ -0.35
SPIN3-216ENST00000638940 PTCD1O75127 700 aaKnown RBP12.84□□□□□ -0.35
SPIN3-216ENST00000638940 A1BGP04217 495 aa12.84□□□□□ -0.35
SPIN3-216ENST00000638940 TNNI3KQ59H18 835 aa12.84□□□□□ -0.35
SPIN3-216ENST00000638940 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.84□□□□□ -0.35
SPIN3-216ENST00000638940 FPGT-TNNI3KV9GXZ4 949 aa12.84□□□□□ -0.35
SPIN3-216ENST00000638940 JCADQ9P266 1359 aa12.84□□□□□ -0.35
SPIN3-216ENST00000638940 FSD2A1L4K1 749 aa12.84□□□□□ -0.35
SPIN3-216ENST00000638940 TTC14Q96N46 770 aa12.84□□□□□ -0.35
SPIN3-216ENST00000638940 CCDC8Q9H0W5 538 aaPredicted RBP12.84□□□□□ -0.35
SPIN3-216ENST00000638940 A0A0U1RQG5 324 aaPredicted RBP12.83□□□□□ -0.36
SPIN3-216ENST00000638940 SIL1Q9H173 461 aa12.83□□□□□ -0.36
SPIN3-216ENST00000638940 FBXO3Q9UK99 471 aa12.83□□□□□ -0.36
SPIN3-216ENST00000638940 BCL9O00512 1426 aa12.83□□□□□ -0.36
SPIN3-216ENST00000638940 SPEF2Q9C093 1822 aa12.83□□□□□ -0.36
SPIN3-216ENST00000638940 CDCA7Q9BWT1 371 aaPredicted RBP12.83□□□□□ -0.36
SPIN3-216ENST00000638940 CCDC171Q6TFL3 1326 aa12.83□□□□□ -0.36
SPIN3-216ENST00000638940 CIAO1O76071 339 aa12.82□□□□□ -0.36
SPIN3-216ENST00000638940 TCIRG1Q13488 830 aa12.82□□□□□ -0.36
SPIN3-216ENST00000638940 LMBR1LQ6UX01 489 aa12.82□□□□□ -0.36
SPIN3-216ENST00000638940 ZGPATQ8N5A5 531 aaKnown RBP12.82□□□□□ -0.36
SPIN3-216ENST00000638940 PIGBQ92521 554 aa12.82□□□□□ -0.36
SPIN3-216ENST00000638940 BRPF3Q9ULD4 1205 aa12.82□□□□□ -0.36
SPIN3-216ENST00000638940 NRAPQ86VF7 1730 aa12.82□□□□□ -0.36
SPIN3-216ENST00000638940 ANKRD36CQ5JPF3 1778 aa12.82□□□□□ -0.36
SPIN3-216ENST00000638940 MED23Q9ULK4 1368 aa12.82□□□□□ -0.36
SPIN3-216ENST00000638940 LTBP4Q8N2S1 1624 aa12.82□□□□□ -0.36
SPIN3-216ENST00000638940 TFCP2Q12800 502 aa12.82□□□□□ -0.36
SPIN3-216ENST00000638940 KLHDC4Q8TBB5 520 aa12.82□□□□□ -0.36
SPIN3-216ENST00000638940 MAP4K1Q92918 833 aa12.82□□□□□ -0.36
SPIN3-216ENST00000638940 PLA2G12BQ9BX93 195 aa12.82□□□□□ -0.36
SPIN3-216ENST00000638940 TLR7Q9NYK1 1049 aaKnown RBP12.82□□□□□ -0.36
SPIN3-216ENST00000638940 STARD3NLO95772 234 aa12.81□□□□□ -0.36
SPIN3-216ENST00000638940 IL15P40933 162 aaPredicted RBP12.81□□□□□ -0.36
SPIN3-216ENST00000638940 NECTIN1Q15223 517 aa12.81□□□□□ -0.36
SPIN3-216ENST00000638940 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.81□□□□□ -0.36
SPIN3-216ENST00000638940 CICQ96RK0 1608 aaPredicted RBP12.81□□□□□ -0.36
SPIN3-216ENST00000638940 DBNLQ9UJU6 430 aaKnown RBP12.81□□□□□ -0.36
SPIN3-216ENST00000638940 NMIQ13287 307 aaPredicted RBP12.81□□□□□ -0.36
SPIN3-216ENST00000638940 ZDHHC9Q9Y397 364 aa12.81□□□□□ -0.36
SPIN3-216ENST00000638940 BRD1O95696 1058 aa12.8□□□□□ -0.36
SPIN3-216ENST00000638940 PTH1RQ03431 593 aa12.8□□□□□ -0.36
SPIN3-216ENST00000638940 KLHL40Q2TBA0 621 aa12.8□□□□□ -0.36
SPIN3-216ENST00000638940 VPS53Q5VIR6 699 aa12.8□□□□□ -0.36
SPIN3-216ENST00000638940 AEBP2Q6ZN18 517 aaPredicted RBP12.8□□□□□ -0.36
SPIN3-216ENST00000638940 ATG9AQ7Z3C6 839 aa12.8□□□□□ -0.36
SPIN3-216ENST00000638940 RASEFQ8IZ41 740 aa12.8□□□□□ -0.36
SPIN3-216ENST00000638940 HAUS7Q99871 368 aa12.8□□□□□ -0.36
SPIN3-216ENST00000638940 BOLA2Q9H3K6 86 aa12.8□□□□□ -0.36
SPIN3-216ENST00000638940 ZSWIM6Q9HCJ5 1215 aa12.8□□□□□ -0.36
SPIN3-216ENST00000638940 THRAP3Q9Y2W1 955 aaKnown RBP12.8□□□□□ -0.36
SPIN3-216ENST00000638940 GOLGA6L3A6NEY3 463 aa12.8□□□□□ -0.36
SPIN3-216ENST00000638940 PCCAP05165 728 aaPredicted RBP12.8□□□□□ -0.36
SPIN3-216ENST00000638940 TSGA10IPQ3SY00 556 aa12.8□□□□□ -0.36
SPIN3-216ENST00000638940 KIF6Q6ZMV9 814 aa12.8□□□□□ -0.36
SPIN3-216ENST00000638940 FSD1Q9BTV5 496 aa12.8□□□□□ -0.36
SPIN3-216ENST00000638940 ALDH8A1Q9H2A2 487 aaPredicted RBP12.8□□□□□ -0.36
SPIN3-216ENST00000638940 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.79□□□□□ -0.36
SPIN3-216ENST00000638940 JARID2Q92833 1246 aaPredicted RBP12.79□□□□□ -0.36
SPIN3-216ENST00000638940 ZSCAN31Q96LW9 406 aaPredicted RBP12.79□□□□□ -0.36
SPIN3-216ENST00000638940 UPF3BQ9BZI7 483 aaKnown RBP12.79□□□□□ -0.36
SPIN3-216ENST00000638940 ZBTB3Q9H5J0 574 aa12.79□□□□□ -0.36
SPIN3-216ENST00000638940 ASAP1Q9ULH1 1129 aa12.79□□□□□ -0.36
SPIN3-216ENST00000638940 LIMCH1Q9UPQ0 1083 aa12.79□□□□□ -0.36
SPIN3-216ENST00000638940 CDHR2Q9BYE9 1310 aa12.79□□□□□ -0.36
SPIN3-216ENST00000638940 EYA2O00167 538 aa12.79□□□□□ -0.36
SPIN3-216ENST00000638940 EXOC5O00471 708 aa12.79□□□□□ -0.36
SPIN3-216ENST00000638940 ZKSCAN1P17029 563 aaPredicted RBP12.79□□□□□ -0.36
SPIN3-216ENST00000638940 HSP90AB3PQ58FF7 597 aa12.79□□□□□ -0.36
SPIN3-216ENST00000638940 HMG20BQ9P0W2 317 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms