RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 BTBD11A6QL63 1104 aa7.35□□□□□ -1.23
PDE4D-229ENST00000638939 POTECB2RU33 542 aa7.35□□□□□ -1.23
PDE4D-229ENST00000638939 A1BGP04217 495 aa7.35□□□□□ -1.23
PDE4D-229ENST00000638939 PRKAR2BP31323 418 aa7.35□□□□□ -1.23
PDE4D-229ENST00000638939 COL13A1Q5TAT6 717 aaPredicted RBP7.35□□□□□ -1.23
PDE4D-229ENST00000638939 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.35□□□□□ -1.23
PDE4D-229ENST00000638939 NPM2Q86SE8 214 aaKnown RBP7.35□□□□□ -1.23
PDE4D-229ENST00000638939 KCNV2Q8TDN2 545 aa7.35□□□□□ -1.23
PDE4D-229ENST00000638939 MASTLQ96GX5 879 aa7.35□□□□□ -1.23
PDE4D-229ENST00000638939 L3MBTL3Q96JM7 780 aaPredicted RBP7.35□□□□□ -1.23
PDE4D-229ENST00000638939 CFAP53Q96M91 514 aa7.35□□□□□ -1.23
PDE4D-229ENST00000638939 ZNF330Q9Y3S2 320 aaPredicted RBP7.35□□□□□ -1.23
PDE4D-229ENST00000638939 PSME4Q14997 1843 aa7.35□□□□□ -1.23
PDE4D-229ENST00000638939 KLRG2A4D1S0 409 aaPredicted RBP7.34□□□□□ -1.23
PDE4D-229ENST00000638939 IQCA1LA6NCM1 817 aa7.34□□□□□ -1.23
PDE4D-229ENST00000638939 NPHP1O15259 732 aa7.34□□□□□ -1.23
PDE4D-229ENST00000638939 HSPA1AP0DMV8 641 aaKnown RBP7.34□□□□□ -1.23
PDE4D-229ENST00000638939 HSPA1BP0DMV9 641 aaKnown RBP7.34□□□□□ -1.23
PDE4D-229ENST00000638939 CCDC93Q567U6 631 aa7.34□□□□□ -1.23
PDE4D-229ENST00000638939 PHACTR3Q96KR7 559 aa7.34□□□□□ -1.23
PDE4D-229ENST00000638939 COL4A5P29400 1685 aa7.34□□□□□ -1.23
PDE4D-229ENST00000638939 TAF1P21675 1872 aa7.34□□□□□ -1.23
PDE4D-229ENST00000638939 CNTNAP1P78357 1384 aa7.33□□□□□ -1.24
PDE4D-229ENST00000638939 PASKQ96RG2 1323 aa7.33□□□□□ -1.24
PDE4D-229ENST00000638939 HTATSF1O43719 755 aaKnown RBP7.33□□□□□ -1.24
PDE4D-229ENST00000638939 SNRPA1P09661 255 aaKnown RBP7.33□□□□□ -1.24
PDE4D-229ENST00000638939 NPR1P16066 1061 aa7.33□□□□□ -1.24
PDE4D-229ENST00000638939 CHADLQ6NUI6 762 aa7.33□□□□□ -1.24
PDE4D-229ENST00000638939 LDHDQ86WU2 507 aa7.33□□□□□ -1.24
PDE4D-229ENST00000638939 NBPF5PQ86XG9 351 aaPredicted RBP7.33□□□□□ -1.24
PDE4D-229ENST00000638939 TNS4Q8IZW8 715 aa7.33□□□□□ -1.24
PDE4D-229ENST00000638939 ZNF579Q8NAF0 562 aaKnown RBP7.33□□□□□ -1.24
PDE4D-229ENST00000638939 C7orf43Q8WVR3 580 aa7.33□□□□□ -1.24
PDE4D-229ENST00000638939 NUDCQ9Y266 331 aa7.33□□□□□ -1.24
PDE4D-229ENST00000638939 ABCC12Q96J65 1359 aa7.33□□□□□ -1.24
PDE4D-229ENST00000638939 KCNQ3O43525 872 aa7.32□□□□□ -1.24
PDE4D-229ENST00000638939 FKBP4Q02790 459 aaKnown RBP eCLIP7.32□□□□□ -1.24
PDE4D-229ENST00000638939 E2F4Q16254 413 aa7.32□□□□□ -1.24
PDE4D-229ENST00000638939 CCDC24Q8N4L8 307 aa7.32□□□□□ -1.24
PDE4D-229ENST00000638939 RTF1Q92541 710 aaKnown RBP7.32□□□□□ -1.24
PDE4D-229ENST00000638939 USP16Q9Y5T5 823 aa7.32□□□□□ -1.24
PDE4D-229ENST00000638939 MYH3P11055 1940 aa7.32□□□□□ -1.24
PDE4D-229ENST00000638939 ZNF541Q9H0D2 1346 aa7.31□□□□□ -1.24
PDE4D-229ENST00000638939 PRAMEF22A3QJZ6 481 aa7.31□□□□□ -1.24
PDE4D-229ENST00000638939 NBPF26B4DH59 902 aa7.31□□□□□ -1.24
PDE4D-229ENST00000638939 DDNO94850 711 aaPredicted RBP7.31□□□□□ -1.24
PDE4D-229ENST00000638939 POTEIP0CG38 1075 aa7.31□□□□□ -1.24
PDE4D-229ENST00000638939 POTEJP0CG39 1038 aa7.31□□□□□ -1.24
PDE4D-229ENST00000638939 U2AF1L5P0DN76 240 aaPredicted RBP7.31□□□□□ -1.24
PDE4D-229ENST00000638939 PPP2R1AP30153 589 aa7.31□□□□□ -1.24
PDE4D-229ENST00000638939 PIP4K2AP48426 406 aaPredicted RBP7.31□□□□□ -1.24
PDE4D-229ENST00000638939 U2AF1Q01081 240 aaKnown RBP eCLIP7.31□□□□□ -1.24
PDE4D-229ENST00000638939 CRY2Q49AN0 593 aa7.31□□□□□ -1.24
PDE4D-229ENST00000638939 NBPF10Q6P3W6 841 aaKnown RBP7.31□□□□□ -1.24
PDE4D-229ENST00000638939 TPTE2Q6XPS3 522 aa7.31□□□□□ -1.24
PDE4D-229ENST00000638939 MCM10Q7L590 875 aa7.31□□□□□ -1.24
PDE4D-229ENST00000638939 HOMEZQ8IX15 550 aa7.31□□□□□ -1.24
PDE4D-229ENST00000638939 RTKN2Q8IZC4 609 aa7.31□□□□□ -1.24
PDE4D-229ENST00000638939 NBPF15Q8N660 670 aa7.31□□□□□ -1.24
PDE4D-229ENST00000638939 TAF1DQ9H5J8 278 aaPredicted RBP7.31□□□□□ -1.24
PDE4D-229ENST00000638939 NIP7Q9Y221 180 aaKnown RBP eCLIP7.31□□□□□ -1.24
PDE4D-229ENST00000638939 POLR2AP24928 1970 aaKnown RBP7.31□□□□□ -1.24
PDE4D-229ENST00000638939 DUOX1Q9NRD9 1551 aa7.3□□□□□ -1.24
PDE4D-229ENST00000638939 PSEN1P49768 467 aa7.3□□□□□ -1.24
PDE4D-229ENST00000638939 PSMD1Q99460 953 aa7.3□□□□□ -1.24
PDE4D-229ENST00000638939 NYXQ9GZU5 481 aa7.3□□□□□ -1.24
PDE4D-229ENST00000638939 TSPYL2Q9H2G4 693 aaPredicted RBP7.3□□□□□ -1.24
PDE4D-229ENST00000638939 AKAP11Q9UKA4 1901 aa7.3□□□□□ -1.24
PDE4D-229ENST00000638939 ERBB4Q15303 1308 aa7.29□□□□□ -1.24
PDE4D-229ENST00000638939 MAP3K15Q6ZN16 1313 aa7.29□□□□□ -1.24
PDE4D-229ENST00000638939 SPEF2Q9C093 1822 aa7.29□□□□□ -1.24
PDE4D-229ENST00000638939 ERVV-1B6SEH8 477 aa7.29□□□□□ -1.24
PDE4D-229ENST00000638939 FZD9O00144 591 aa7.29□□□□□ -1.24
PDE4D-229ENST00000638939 ALDH1B1P30837 517 aa7.29□□□□□ -1.24
PDE4D-229ENST00000638939 IARSP41252 1262 aaKnown RBP7.29□□□□□ -1.24
PDE4D-229ENST00000638939 TAF7Q15545 349 aaPredicted RBP7.29□□□□□ -1.24
PDE4D-229ENST00000638939 GRIPAP1Q4V328 841 aa7.29□□□□□ -1.24
PDE4D-229ENST00000638939 CC2D2BQ6DHV5 1058 aa7.29□□□□□ -1.24
PDE4D-229ENST00000638939 GPC2Q8N158 579 aa7.29□□□□□ -1.24
PDE4D-229ENST00000638939 PNISRQ8TF01 805 aaKnown RBP7.29□□□□□ -1.24
PDE4D-229ENST00000638939 ZNF277Q9NRM2 450 aaPredicted RBP7.29□□□□□ -1.24
PDE4D-229ENST00000638939 MKRN1Q9UHC7 482 aaKnown RBP7.29□□□□□ -1.24
PDE4D-229ENST00000638939 HACL1Q9UJ83 578 aa7.29□□□□□ -1.24
PDE4D-229ENST00000638939 ZNF646O15015 1829 aaPredicted RBP7.29□□□□□ -1.24
PDE4D-229ENST00000638939 TMEM88BA6NKF7 163 aa7.28□□□□□ -1.24
PDE4D-229ENST00000638939 ITGBL1O95965 494 aaPredicted RBP7.28□□□□□ -1.24
PDE4D-229ENST00000638939 HOXA10P31260 410 aaPredicted RBP7.28□□□□□ -1.24
PDE4D-229ENST00000638939 EPHX2P34913 555 aa7.28□□□□□ -1.24
PDE4D-229ENST00000638939 DCTN1Q14203 1278 aa7.28□□□□□ -1.24
PDE4D-229ENST00000638939 KIF6Q6ZMV9 814 aa7.28□□□□□ -1.24
PDE4D-229ENST00000638939 PNMA8AQ86V59 439 aaPredicted RBP7.28□□□□□ -1.24
PDE4D-229ENST00000638939 PRDM10Q9NQV6 1147 aa7.28□□□□□ -1.24
PDE4D-229ENST00000638939 TNRC18O15417 2968 aaPredicted RBP7.28□□□□□ -1.24
PDE4D-229ENST00000638939 LAMB1P07942 1786 aa7.28□□□□□ -1.24
PDE4D-229ENST00000638939 CACNA1FO60840 1977 aa7.28□□□□□ -1.24
PDE4D-229ENST00000638939 SCN9AQ15858 1988 aa7.28□□□□□ -1.24
PDE4D-229ENST00000638939 RNF123Q5XPI4 1314 aa7.27□□□□□ -1.24
PDE4D-229ENST00000638939 UBN2Q6ZU65 1347 aa7.27□□□□□ -1.24
PDE4D-229ENST00000638939 RASSF10A6NK89 507 aa7.27□□□□□ -1.25
PDE4D-229ENST00000638939 FOXN1O15353 648 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms