RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 LUZP1Q86V48 1076 aa12.99□□□□□ -0.33
SNIP1-204ENST00000638725 KLHL34Q8N239 644 aa12.99□□□□□ -0.33
SNIP1-204ENST00000638725 MAP3K2Q9Y2U5 619 aa12.99□□□□□ -0.33
SNIP1-204ENST00000638725 EID1Q9Y6B2 187 aa12.99□□□□□ -0.33
SNIP1-204ENST00000638725 SLC27A2O14975 620 aa12.99□□□□□ -0.33
SNIP1-204ENST00000638725 PTGS1P23219 599 aa12.99□□□□□ -0.33
SNIP1-204ENST00000638725 TYRO3Q06418 890 aa12.99□□□□□ -0.33
SNIP1-204ENST00000638725 NBPF6Q5VWK0 638 aa12.99□□□□□ -0.33
SNIP1-204ENST00000638725 CKAP2LQ8IYA6 745 aa12.99□□□□□ -0.33
SNIP1-204ENST00000638725 MAP4K1Q92918 833 aa12.99□□□□□ -0.33
SNIP1-204ENST00000638725 NBPF4Q96M43 638 aa12.99□□□□□ -0.33
SNIP1-204ENST00000638725 TAF6LQ9Y6J9 622 aa12.99□□□□□ -0.33
SNIP1-204ENST00000638725 GOLGA6L6A8MZA4 724 aa12.98□□□□□ -0.33
SNIP1-204ENST00000638725 RIOK3O14730 519 aaKnown RBP12.98□□□□□ -0.33
SNIP1-204ENST00000638725 TPM3P06753 285 aa12.98□□□□□ -0.33
SNIP1-204ENST00000638725 PROSER3Q2NL68 480 aa12.98□□□□□ -0.33
SNIP1-204ENST00000638725 CCDC8Q9H0W5 538 aaPredicted RBP12.98□□□□□ -0.33
SNIP1-204ENST00000638725 KDM3BQ7LBC6 1761 aa12.98□□□□□ -0.33
SNIP1-204ENST00000638725 BTBD11A6QL63 1104 aa12.98□□□□□ -0.33
SNIP1-204ENST00000638725 TEFQ10587 303 aa12.98□□□□□ -0.33
SNIP1-204ENST00000638725 A0A0D9SFI3 127 aa12.98□□□□□ -0.33
SNIP1-204ENST00000638725 MPRIPQ6WCQ1 1025 aa12.98□□□□□ -0.33
SNIP1-204ENST00000638725 ERC1Q8IUD2 1116 aa12.98□□□□□ -0.33
SNIP1-204ENST00000638725 EAF2Q96CJ1 260 aaPredicted RBP12.98□□□□□ -0.33
SNIP1-204ENST00000638725 DACT1Q9NYF0 836 aa12.98□□□□□ -0.33
SNIP1-204ENST00000638725 TLR7Q9NYK1 1049 aaKnown RBP12.98□□□□□ -0.33
SNIP1-204ENST00000638725 TFIP11Q9UBB9 837 aaKnown RBP12.98□□□□□ -0.33
SNIP1-204ENST00000638725 TBX22Q9Y458 520 aa12.98□□□□□ -0.33
SNIP1-204ENST00000638725 ELP1O95163 1332 aa12.97□□□□□ -0.33
SNIP1-204ENST00000638725 SASH1O94885 1247 aa12.97□□□□□ -0.33
SNIP1-204ENST00000638725 DBF4Q9UBU7 674 aaPredicted RBP12.97□□□□□ -0.33
SNIP1-204ENST00000638725 PSMA5P28066 241 aa12.97□□□□□ -0.33
SNIP1-204ENST00000638725 CBX1P83916 185 aa12.97□□□□□ -0.33
SNIP1-204ENST00000638725 CHAF1AQ13111 956 aaPredicted RBP12.97□□□□□ -0.33
SNIP1-204ENST00000638725 STK3Q13188 491 aa12.97□□□□□ -0.33
SNIP1-204ENST00000638725 ANO6Q4KMQ2 910 aa12.97□□□□□ -0.33
SNIP1-204ENST00000638725 PPP4R3BQ5MIZ7 849 aa12.97□□□□□ -0.33
SNIP1-204ENST00000638725 LARP1Q6PKG0 1096 aaKnown RBP12.97□□□□□ -0.33
SNIP1-204ENST00000638725 BLOC1S2Q6QNY1 142 aa12.97□□□□□ -0.33
SNIP1-204ENST00000638725 PLPPR3Q6T4P5 718 aa12.97□□□□□ -0.33
SNIP1-204ENST00000638725 TNMDQ9H2S6 317 aa12.97□□□□□ -0.33
SNIP1-204ENST00000638725 CBX8Q9HC52 389 aa12.97□□□□□ -0.33
SNIP1-204ENST00000638725 CHD2O14647 1828 aaKnown RBP12.96□□□□□ -0.33
SNIP1-204ENST00000638725 ALDH1L1O75891 902 aa12.96□□□□□ -0.33
SNIP1-204ENST00000638725 ATP2B3Q16720 1220 aa12.96□□□□□ -0.33
SNIP1-204ENST00000638725 ZNF530Q6P9A1 599 aaPredicted RBP12.96□□□□□ -0.33
SNIP1-204ENST00000638725 SUCLG2Q96I99 432 aa12.96□□□□□ -0.33
SNIP1-204ENST00000638725 BOLA2Q9H3K6 86 aa12.96□□□□□ -0.33
SNIP1-204ENST00000638725 SETD1BQ9UPS6 1966 aaKnown RBP12.96□□□□□ -0.33
SNIP1-204ENST00000638725 PRAMEF22A3QJZ6 481 aa12.96□□□□□ -0.34
SNIP1-204ENST00000638725 PDCP20941 246 aa12.96□□□□□ -0.34
SNIP1-204ENST00000638725 LRMPQ12912 555 aa12.96□□□□□ -0.34
SNIP1-204ENST00000638725 TOB2Q14106 344 aaPredicted RBP12.96□□□□□ -0.34
SNIP1-204ENST00000638725 CCDC186Q7Z3E2 898 aa12.96□□□□□ -0.34
SNIP1-204ENST00000638725 SPATA32Q96LK8 384 aa12.96□□□□□ -0.34
SNIP1-204ENST00000638725 NPHP4O75161 1426 aaPredicted RBP12.95□□□□□ -0.34
SNIP1-204ENST00000638725 GOLGA6L4A6NEF3 574 aa12.95□□□□□ -0.34
SNIP1-204ENST00000638725 KSR2Q6VAB6 950 aa12.95□□□□□ -0.34
SNIP1-204ENST00000638725 IP6K1Q92551 441 aa12.95□□□□□ -0.34
SNIP1-204ENST00000638725 KAZALD1Q96I82 304 aa12.95□□□□□ -0.34
SNIP1-204ENST00000638725 FSD1Q9BTV5 496 aa12.95□□□□□ -0.34
SNIP1-204ENST00000638725 CHMP4AQ9BY43 222 aa12.95□□□□□ -0.34
SNIP1-204ENST00000638725 LTN1O94822 1766 aa12.95□□□□□ -0.34
SNIP1-204ENST00000638725 HIP1O00291 1037 aa12.95□□□□□ -0.34
SNIP1-204ENST00000638725 RPS6KB1P23443 525 aa12.95□□□□□ -0.34
SNIP1-204ENST00000638725 LEO1Q8WVC0 666 aaPredicted RBP12.95□□□□□ -0.34
SNIP1-204ENST00000638725 LRRC59Q96AG4 307 aaKnown RBP12.95□□□□□ -0.34
SNIP1-204ENST00000638725 SIL1Q9H173 461 aa12.95□□□□□ -0.34
SNIP1-204ENST00000638725 BICC1Q9H694 974 aaKnown RBP12.95□□□□□ -0.34
SNIP1-204ENST00000638725 NRBP1Q9UHY1 535 aa12.95□□□□□ -0.34
SNIP1-204ENST00000638725 ANKARQ7Z5J8 1434 aa12.95□□□□□ -0.34
SNIP1-204ENST00000638725 G3BP1Q13283 466 aaKnown RBP eCLIP12.94□□□□□ -0.34
SNIP1-204ENST00000638725 ZNF589Q86UQ0 364 aaPredicted RBP12.94□□□□□ -0.34
SNIP1-204ENST00000638725 SCAND2PQ9GZW5 306 aaPredicted RBP12.94□□□□□ -0.34
SNIP1-204ENST00000638725 ZSCAN20P17040 1043 aaPredicted RBP12.94□□□□□ -0.34
SNIP1-204ENST00000638725 AKAP4Q5JQC9 854 aa12.94□□□□□ -0.34
SNIP1-204ENST00000638725 RNF20Q5VTR2 975 aa12.94□□□□□ -0.34
SNIP1-204ENST00000638725 DRC7Q8IY82 874 aa12.94□□□□□ -0.34
SNIP1-204ENST00000638725 PDCL2Q8N4E4 241 aa12.94□□□□□ -0.34
SNIP1-204ENST00000638725 USP54Q70EL1 1684 aa12.94□□□□□ -0.34
SNIP1-204ENST00000638725 NPHP3Q7Z494 1330 aa12.94□□□□□ -0.34
SNIP1-204ENST00000638725 KCNA6P17658 529 aa12.93□□□□□ -0.34
SNIP1-204ENST00000638725 ANKRD1Q15327 319 aa12.93□□□□□ -0.34
SNIP1-204ENST00000638725 KLHDC4Q8TBB5 520 aa12.93□□□□□ -0.34
SNIP1-204ENST00000638725 TRIM5Q9C035 493 aa12.93□□□□□ -0.34
SNIP1-204ENST00000638725 CLSTN2Q9H4D0 955 aa12.93□□□□□ -0.34
SNIP1-204ENST00000638725 SNRKQ9NRH2 765 aa12.93□□□□□ -0.34
SNIP1-204ENST00000638725 DDX19AQ9NUU7 478 aaKnown RBP12.93□□□□□ -0.34
SNIP1-204ENST00000638725 MED23Q9ULK4 1368 aa12.93□□□□□ -0.34
SNIP1-204ENST00000638725 GRM8O00222 908 aa12.93□□□□□ -0.34
SNIP1-204ENST00000638725 GIGYF1O75420 1035 aaPredicted RBP12.93□□□□□ -0.34
SNIP1-204ENST00000638725 NR1I2O75469 434 aa12.93□□□□□ -0.34
SNIP1-204ENST00000638725 BICD2Q8TD16 824 aa12.93□□□□□ -0.34
SNIP1-204ENST00000638725 EDC3Q96F86 508 aaKnown RBP12.93□□□□□ -0.34
SNIP1-204ENST00000638725 PGBD1Q96JS3 809 aa12.93□□□□□ -0.34
SNIP1-204ENST00000638725 JAK2O60674 1132 aa12.92□□□□□ -0.34
SNIP1-204ENST00000638725 PDIA4P13667 645 aaKnown RBP12.92□□□□□ -0.34
SNIP1-204ENST00000638725 AIMP1Q12904 312 aaKnown RBP12.92□□□□□ -0.34
SNIP1-204ENST00000638725 RBM43Q6ZSC3 357 aaKnown RBP12.92□□□□□ -0.34
SNIP1-204ENST00000638725 ANKRD7Q92527 254 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms