RNA–Protein interactions for RNA: ENST00000638692.1

PTPRVP-203, Transcript of protein tyrosine phosphatase, receptor type V, pseudogene, humanhuman

TSL 1 (best)

Gene PTPRVP, Length 1,189 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRVP-203ENST00000638692 LAMB2P55268 1798 aa22.33■■□□□ 1.17
PTPRVP-203ENST00000638692 GRIN3BO60391 1043 aa22.33■■□□□ 1.17
PTPRVP-203ENST00000638692 SRGNP10124 158 aa22.33■■□□□ 1.17
PTPRVP-203ENST00000638692 GTF2E1P29083 439 aaPredicted RBP22.33■■□□□ 1.17
PTPRVP-203ENST00000638692 HNRNPUQ00839 825 aaKnown RBP eCLIP22.33■■□□□ 1.17
PTPRVP-203ENST00000638692 PPP1R42Q7Z4L9 355 aa22.33■■□□□ 1.17
PTPRVP-203ENST00000638692 SYNE4Q8N205 404 aa22.33■■□□□ 1.17
PTPRVP-203ENST00000638692 UTP14AQ9BVJ6 771 aaKnown RBP22.33■■□□□ 1.17
PTPRVP-203ENST00000638692 SLX4Q8IY92 1834 aa22.33■■□□□ 1.16
PTPRVP-203ENST00000638692 PI4KAP2A4QPH2 592 aa22.32■■□□□ 1.16
PTPRVP-203ENST00000638692 DALRD3Q5D0E6 543 aaKnown RBP22.32■■□□□ 1.16
PTPRVP-203ENST00000638692 KSR2Q6VAB6 950 aa22.32■■□□□ 1.16
PTPRVP-203ENST00000638692 PI4KAP1Q8N8J0 262 aa22.32■■□□□ 1.16
PTPRVP-203ENST00000638692 PDZRN3Q9UPQ7 1066 aa22.32■■□□□ 1.16
PTPRVP-203ENST00000638692 MAP3K2Q9Y2U5 619 aa22.32■■□□□ 1.16
PTPRVP-203ENST00000638692 RIC1Q4ADV7 1423 aa22.31■■□□□ 1.16
PTPRVP-203ENST00000638692 DDX60Q8IY21 1712 aaKnown RBP22.31■■□□□ 1.16
PTPRVP-203ENST00000638692 DDX58O95786 925 aaKnown RBP22.31■■□□□ 1.16
PTPRVP-203ENST00000638692 FLIIQ13045 1269 aa22.31■■□□□ 1.16
PTPRVP-203ENST00000638692 TRIM28Q13263 835 aaKnown RBP22.31■■□□□ 1.16
PTPRVP-203ENST00000638692 MYD88Q99836 296 aa22.31■■□□□ 1.16
PTPRVP-203ENST00000638692 METTL22Q9BUU2 404 aaPredicted RBP22.31■■□□□ 1.16
PTPRVP-203ENST00000638692 SLC10A5Q5PT55 438 aa22.3■■□□□ 1.16
PTPRVP-203ENST00000638692 C3orf67Q6ZVT6 689 aa22.3■■□□□ 1.16
PTPRVP-203ENST00000638692 ZNF622Q969S3 477 aaKnown RBP eCLIP22.3■■□□□ 1.16
PTPRVP-203ENST00000638692 STYK1Q6J9G0 422 aa22.29■■□□□ 1.16
PTPRVP-203ENST00000638692 TTLL6Q8N841 843 aa22.29■■□□□ 1.16
PTPRVP-203ENST00000638692 TRMT112Q9UI30 125 aaKnown RBP22.29■■□□□ 1.16
PTPRVP-203ENST00000638692 CRY2Q49AN0 593 aa22.28■■□□□ 1.16
PTPRVP-203ENST00000638692 MASTLQ96GX5 879 aa22.28■■□□□ 1.16
PTPRVP-203ENST00000638692 RNF123Q5XPI4 1314 aa22.28■■□□□ 1.16
PTPRVP-203ENST00000638692 IGKV5-2P06315 115 aa22.27■■□□□ 1.16
PTPRVP-203ENST00000638692 SBF1O95248 1867 aa22.26■■□□□ 1.15
PTPRVP-203ENST00000638692 HCLS1P14317 486 aaPredicted RBP22.26■■□□□ 1.15
PTPRVP-203ENST00000638692 NPR1P16066 1061 aa22.26■■□□□ 1.15
PTPRVP-203ENST00000638692 FKBP5Q13451 457 aaPredicted RBP22.26■■□□□ 1.15
PTPRVP-203ENST00000638692 FAM89AQ96GI7 184 aa22.26■■□□□ 1.15
PTPRVP-203ENST00000638692 SH3TC1Q8TE82 1336 aa22.26■■□□□ 1.15
PTPRVP-203ENST00000638692 TAF1P21675 1872 aa22.26■■□□□ 1.15
PTPRVP-203ENST00000638692 MRPL50Q8N5N7 158 aaKnown RBP22.25■■□□□ 1.15
PTPRVP-203ENST00000638692 SSH1Q8WYL5 1049 aa22.25■■□□□ 1.15
PTPRVP-203ENST00000638692 RTL5Q5HYW3 569 aaPredicted RBP22.24■■□□□ 1.15
PTPRVP-203ENST00000638692 PRPF40BQ6NWY9 871 aaKnown RBP22.24■■□□□ 1.15
PTPRVP-203ENST00000638692 ARHGAP27Q6ZUM4 889 aa22.24■■□□□ 1.15
PTPRVP-203ENST00000638692 CCDC191Q8NCU4 936 aa22.24■■□□□ 1.15
PTPRVP-203ENST00000638692 CNKSR1Q969H4 720 aa22.24■■□□□ 1.15
PTPRVP-203ENST00000638692 FER1L6Q2WGJ9 1857 aa22.24■■□□□ 1.15
PTPRVP-203ENST00000638692 F6X3S4 739 aa22.23■■□□□ 1.15
PTPRVP-203ENST00000638692 YY1P25490 414 aa22.23■■□□□ 1.15
PTPRVP-203ENST00000638692 CWF19L2Q2TBE0 894 aaKnown RBP22.23■■□□□ 1.15
PTPRVP-203ENST00000638692 DNAAF4Q8WXU2 420 aa22.23■■□□□ 1.15
PTPRVP-203ENST00000638692 CCDC88AQ3V6T2 1871 aa22.23■■□□□ 1.15
PTPRVP-203ENST00000638692 HOXA10P31260 410 aaPredicted RBP22.22■■□□□ 1.15
PTPRVP-203ENST00000638692 ZBTB38Q8NAP3 1195 aaPredicted RBP22.22■■□□□ 1.15
PTPRVP-203ENST00000638692 C7orf43Q8WVR3 580 aa22.22■■□□□ 1.15
PTPRVP-203ENST00000638692 JARID2Q92833 1246 aaPredicted RBP22.22■■□□□ 1.15
PTPRVP-203ENST00000638692 NLRP3Q96P20 1036 aa22.22■■□□□ 1.15
PTPRVP-203ENST00000638692 CWC25Q9NXE8 425 aaPredicted RBP22.22■■□□□ 1.15
PTPRVP-203ENST00000638692 NEURL1BA8MQ27 555 aa22.21■■□□□ 1.15
PTPRVP-203ENST00000638692 C21orf2O43822 256 aa22.21■■□□□ 1.15
PTPRVP-203ENST00000638692 BCL2L13Q9BXK5 485 aa22.21■■□□□ 1.15
PTPRVP-203ENST00000638692 ZNF219Q9P2Y4 722 aaPredicted RBP22.21■■□□□ 1.15
PTPRVP-203ENST00000638692 ZBED9Q6R2W3 1325 aa22.21■■□□□ 1.15
PTPRVP-203ENST00000638692 PCCAP05165 728 aaPredicted RBP22.2■■□□□ 1.14
PTPRVP-203ENST00000638692 CT47B1P0C2W7 299 aaPredicted RBP22.2■■□□□ 1.14
PTPRVP-203ENST00000638692 NEXNQ0ZGT2 675 aa22.2■■□□□ 1.14
PTPRVP-203ENST00000638692 IRS4O14654 1257 aaPredicted RBP22.19■■□□□ 1.14
PTPRVP-203ENST00000638692 ALDH1L2Q3SY69 923 aa22.19■■□□□ 1.14
PTPRVP-203ENST00000638692 RPGRQ92834 1020 aaKnown RBP22.19■■□□□ 1.14
PTPRVP-203ENST00000638692 COL4A1P02462 1669 aa22.18■■□□□ 1.14
PTPRVP-203ENST00000638692 ALDH1B1P30837 517 aa22.18■■□□□ 1.14
PTPRVP-203ENST00000638692 PRELPP51888 382 aa22.18■■□□□ 1.14
PTPRVP-203ENST00000638692 OLFM4Q6UX06 510 aa22.18■■□□□ 1.14
PTPRVP-203ENST00000638692 SLC51AQ86UW1 340 aa22.18■■□□□ 1.14
PTPRVP-203ENST00000638692 CRAMP1Q96RY5 1269 aa22.18■■□□□ 1.14
PTPRVP-203ENST00000638692 MYH3P11055 1940 aa22.18■■□□□ 1.14
PTPRVP-203ENST00000638692 NFKBIEO00221 500 aa22.17■■□□□ 1.14
PTPRVP-203ENST00000638692 RASSF7Q02833 373 aa22.17■■□□□ 1.14
PTPRVP-203ENST00000638692 GCKRQ14397 625 aa22.17■■□□□ 1.14
PTPRVP-203ENST00000638692 BEND3Q5T5X7 828 aa22.17■■□□□ 1.14
PTPRVP-203ENST00000638692 LINS1Q8NG48 757 aa22.17■■□□□ 1.14
PTPRVP-203ENST00000638692 RBM17Q96I25 401 aaKnown RBP22.17■■□□□ 1.14
PTPRVP-203ENST00000638692 SF3B3Q15393 1217 aaKnown RBP22.16■■□□□ 1.14
PTPRVP-203ENST00000638692 ABCC4O15439 1325 aa22.15■■□□□ 1.14
PTPRVP-203ENST00000638692 H7C1W4 665 aa22.15■■□□□ 1.14
PTPRVP-203ENST00000638692 RARSP54136 660 aaKnown RBP22.15■■□□□ 1.14
PTPRVP-203ENST00000638692 SMC4Q9NTJ3 1288 aa22.15■■□□□ 1.14
PTPRVP-203ENST00000638692 SNED1Q8TER0 1413 aa22.14■■□□□ 1.14
PTPRVP-203ENST00000638692 CDHR2Q9BYE9 1310 aa22.14■■□□□ 1.14
PTPRVP-203ENST00000638692 CASP7P55210 303 aa22.14■■□□□ 1.13
PTPRVP-203ENST00000638692 DICER1Q9UPY3 1922 aaKnown RBP22.14■■□□□ 1.13
PTPRVP-203ENST00000638692 PTPRCP08575 1304 aa22.13■■□□□ 1.13
PTPRVP-203ENST00000638692 PDE8AO60658 829 aa22.12■■□□□ 1.13
PTPRVP-203ENST00000638692 BRPF1P55201 1214 aaPredicted RBP22.12■■□□□ 1.13
PTPRVP-203ENST00000638692 SLC4A10Q6U841 1118 aa22.12■■□□□ 1.13
PTPRVP-203ENST00000638692 UBE3BQ7Z3V4 1068 aa22.12■■□□□ 1.13
PTPRVP-203ENST00000638692 C9orf131Q5VYM1 1079 aa22.11■■□□□ 1.13
PTPRVP-203ENST00000638692 PPEF1O14829 653 aaPredicted RBP22.1■■□□□ 1.13
PTPRVP-203ENST00000638692 CCDC93Q567U6 631 aa22.1■■□□□ 1.13
PTPRVP-203ENST00000638692 SOGA3Q5TF21 947 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms