RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 COLQQ9Y215 455 aaPredicted RBP5.67□□□□□ -1.5
GABRA1-220ENST00000638159 TRIOBPQ9H2D6 2365 aa5.67□□□□□ -1.5
GABRA1-220ENST00000638159 ANKRD26Q9UPS8 1709 aa5.67□□□□□ -1.5
GABRA1-220ENST00000638159 PABPC4Q13310 644 aaKnown RBP eCLIP5.67□□□□□ -1.5
GABRA1-220ENST00000638159 NFIXQ14938 502 aa5.67□□□□□ -1.5
GABRA1-220ENST00000638159 MICALL2Q8IY33 904 aa5.67□□□□□ -1.5
GABRA1-220ENST00000638159 C7orf61Q8IZ16 206 aa5.67□□□□□ -1.5
GABRA1-220ENST00000638159 IVNS1ABPQ9Y6Y0 642 aa5.67□□□□□ -1.5
GABRA1-220ENST00000638159 MAPK8IP3Q9UPT6 1336 aa5.67□□□□□ -1.5
GABRA1-220ENST00000638159 TRAF5O00463 557 aa5.67□□□□□ -1.5
GABRA1-220ENST00000638159 DLGAP5Q15398 846 aa5.67□□□□□ -1.5
GABRA1-220ENST00000638159 DNAJC10Q8IXB1 793 aa5.67□□□□□ -1.5
GABRA1-220ENST00000638159 RRS1Q15050 365 aaKnown RBP5.66□□□□□ -1.5
GABRA1-220ENST00000638159 APOBEC3FQ8IUX4 373 aaKnown RBP5.66□□□□□ -1.5
GABRA1-220ENST00000638159 ZSCAN29Q8IWY8 852 aaPredicted RBP5.66□□□□□ -1.5
GABRA1-220ENST00000638159 PIGBQ92521 554 aa5.66□□□□□ -1.5
GABRA1-220ENST00000638159 ZMYND8Q9ULU4 1186 aaPredicted RBP5.66□□□□□ -1.5
GABRA1-220ENST00000638159 CHMP3Q9Y3E7 222 aa5.66□□□□□ -1.5
GABRA1-220ENST00000638159 MYBBP1AQ9BQG0 1328 aaKnown RBP5.66□□□□□ -1.5
GABRA1-220ENST00000638159 H0YGN5 161 aa5.66□□□□□ -1.5
GABRA1-220ENST00000638159 RPS12P25398 132 aaKnown RBP5.66□□□□□ -1.5
GABRA1-220ENST00000638159 WASHC4Q2M389 1173 aa5.66□□□□□ -1.5
GABRA1-220ENST00000638159 GAS2L2Q8NHY3 880 aa5.66□□□□□ -1.5
GABRA1-220ENST00000638159 ZNF296Q8WUU4 475 aaPredicted RBP5.66□□□□□ -1.5
GABRA1-220ENST00000638159 MSRAQ9UJ68 235 aa5.66□□□□□ -1.5
GABRA1-220ENST00000638159 NRXN1Q9ULB1 1477 aa5.66□□□□□ -1.5
GABRA1-220ENST00000638159 CNGA1P29973 690 aa5.66□□□□□ -1.5
GABRA1-220ENST00000638159 EPS15P42566 896 aa5.66□□□□□ -1.5
GABRA1-220ENST00000638159 FCGRTP55899 365 aa5.66□□□□□ -1.5
GABRA1-220ENST00000638159 DMWDQ09019 674 aa5.66□□□□□ -1.5
GABRA1-220ENST00000638159 HHIPL1Q96JK4 782 aa5.66□□□□□ -1.5
GABRA1-220ENST00000638159 CUL9Q8IWT3 2517 aa5.66□□□□□ -1.5
GABRA1-220ENST00000638159 TONSLQ96HA7 1378 aa5.65□□□□□ -1.5
GABRA1-220ENST00000638159 UBE2Q2LH0YL09 131 aa5.65□□□□□ -1.5
GABRA1-220ENST00000638159 TNPO2O14787 897 aaKnown RBP5.65□□□□□ -1.5
GABRA1-220ENST00000638159 NBPF9Q3BBW0 867 aa5.65□□□□□ -1.5
GABRA1-220ENST00000638159 DCAF15Q66K64 600 aa5.65□□□□□ -1.5
GABRA1-220ENST00000638159 IRF2BPLQ9H1B7 796 aa5.65□□□□□ -1.5
GABRA1-220ENST00000638159 GGA3Q9NZ52 723 aa5.65□□□□□ -1.5
GABRA1-220ENST00000638159 PXDNQ92626 1479 aa5.65□□□□□ -1.5
GABRA1-220ENST00000638159 SPDYE4A6NLX3 237 aa5.65□□□□□ -1.5
GABRA1-220ENST00000638159 GLI3P10071 1580 aa5.65□□□□□ -1.51
GABRA1-220ENST00000638159 SUGP1Q8IWZ8 645 aaKnown RBP5.65□□□□□ -1.51
GABRA1-220ENST00000638159 CARMIL3Q8ND23 1372 aa5.65□□□□□ -1.51
GABRA1-220ENST00000638159 PITPNM2Q9BZ72 1349 aa5.65□□□□□ -1.51
GABRA1-220ENST00000638159 KIF28PB7ZC32 967 aa5.64□□□□□ -1.51
GABRA1-220ENST00000638159 TMEM31Q5JXX7 168 aa5.64□□□□□ -1.51
GABRA1-220ENST00000638159 SPC25Q9HBM1 224 aa5.64□□□□□ -1.51
GABRA1-220ENST00000638159 SLC5A4Q9NY91 659 aa5.64□□□□□ -1.51
GABRA1-220ENST00000638159 KIAA0100Q14667 2235 aaKnown RBP5.64□□□□□ -1.51
GABRA1-220ENST00000638159 GPTP24298 496 aa5.64□□□□□ -1.51
GABRA1-220ENST00000638159 LINC00116Q8NCU8 138 aa5.64□□□□□ -1.51
GABRA1-220ENST00000638159 MAFAQ8NHW3 353 aaPredicted RBP5.64□□□□□ -1.51
GABRA1-220ENST00000638159 ZKSCAN4Q969J2 545 aaPredicted RBP5.64□□□□□ -1.51
GABRA1-220ENST00000638159 NBPF3Q9H094 633 aa5.64□□□□□ -1.51
GABRA1-220ENST00000638159 PICK1Q9NRD5 415 aa5.64□□□□□ -1.51
GABRA1-220ENST00000638159 UBR1Q8IWV7 1749 aa5.64□□□□□ -1.51
GABRA1-220ENST00000638159 RPTORQ8N122 1335 aa5.64□□□□□ -1.51
GABRA1-220ENST00000638159 CNTNAP4Q9C0A0 1308 aa5.64□□□□□ -1.51
GABRA1-220ENST00000638159 HOXC9P31274 260 aa5.64□□□□□ -1.51
GABRA1-220ENST00000638159 CCDC152Q4G0S7 254 aa5.64□□□□□ -1.51
GABRA1-220ENST00000638159 TJAP1Q5JTD0 557 aa5.64□□□□□ -1.51
GABRA1-220ENST00000638159 SAPCD2Q86UD0 394 aa5.64□□□□□ -1.51
GABRA1-220ENST00000638159 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.64□□□□□ -1.51
GABRA1-220ENST00000638159 RGL2O15211 777 aa5.64□□□□□ -1.51
GABRA1-220ENST00000638159 CD99L2Q8TCZ2 262 aa5.64□□□□□ -1.51
GABRA1-220ENST00000638159 TRMT112Q9UI30 125 aaKnown RBP5.64□□□□□ -1.51
GABRA1-220ENST00000638159 USP42Q9H9J4 1324 aaKnown RBP5.63□□□□□ -1.51
GABRA1-220ENST00000638159 CPSF1Q10570 1443 aaKnown RBP5.63□□□□□ -1.51
GABRA1-220ENST00000638159 A0A1W2PPC1 479 aa5.63□□□□□ -1.51
GABRA1-220ENST00000638159 BBOX1O75936 387 aa5.63□□□□□ -1.51
GABRA1-220ENST00000638159 P2RX7Q99572 595 aaKnown RBP5.63□□□□□ -1.51
GABRA1-220ENST00000638159 USP17L8P0C7I0 530 aa5.63□□□□□ -1.51
GABRA1-220ENST00000638159 L3MBTL3Q96JM7 780 aaPredicted RBP5.63□□□□□ -1.51
GABRA1-220ENST00000638159 PRDM6Q9NQX0 595 aa5.63□□□□□ -1.51
GABRA1-220ENST00000638159 PRR36Q9H6K5 1346 aa5.63□□□□□ -1.51
GABRA1-220ENST00000638159 PRAMEF22A3QJZ6 481 aa5.63□□□□□ -1.51
GABRA1-220ENST00000638159 FOXK2Q01167 660 aa5.63□□□□□ -1.51
GABRA1-220ENST00000638159 NEXNQ0ZGT2 675 aa5.63□□□□□ -1.51
GABRA1-220ENST00000638159 PARP10Q53GL7 1025 aa5.63□□□□□ -1.51
GABRA1-220ENST00000638159 PPP2R3CQ969Q6 453 aa5.63□□□□□ -1.51
GABRA1-220ENST00000638159 AXIN2Q9Y2T1 843 aa5.63□□□□□ -1.51
GABRA1-220ENST00000638159 LRRFIP2Q9Y608 721 aaKnown RBP5.63□□□□□ -1.51
GABRA1-220ENST00000638159 GNRH1P01148 92 aa5.62□□□□□ -1.51
GABRA1-220ENST00000638159 IGHMBP2P38935 993 aaKnown RBP5.62□□□□□ -1.51
GABRA1-220ENST00000638159 MPHOSPH8Q99549 860 aa5.62□□□□□ -1.51
GABRA1-220ENST00000638159 GPRC5DQ9NZD1 345 aa5.62□□□□□ -1.51
GABRA1-220ENST00000638159 GGA1Q9UJY5 639 aa5.62□□□□□ -1.51
GABRA1-220ENST00000638159 CDHR2Q9BYE9 1310 aa5.62□□□□□ -1.51
GABRA1-220ENST00000638159 CCL15-CCL14A0A0B4J2E2 113 aa5.62□□□□□ -1.51
GABRA1-220ENST00000638159 POTEIP0CG38 1075 aa5.62□□□□□ -1.51
GABRA1-220ENST00000638159 POTEJP0CG39 1038 aa5.62□□□□□ -1.51
GABRA1-220ENST00000638159 GRK4P32298 578 aa5.62□□□□□ -1.51
GABRA1-220ENST00000638159 CCL15Q16663 113 aa5.62□□□□□ -1.51
GABRA1-220ENST00000638159 NOL8Q76FK4 1167 aaKnown RBP5.62□□□□□ -1.51
GABRA1-220ENST00000638159 NFATC2IPQ8NCF5 419 aa5.62□□□□□ -1.51
GABRA1-220ENST00000638159 UPF3BQ9BZI7 483 aaKnown RBP5.62□□□□□ -1.51
GABRA1-220ENST00000638159 THEGQ9P2T0 379 aa5.62□□□□□ -1.51
GABRA1-220ENST00000638159 COL14A1Q05707 1796 aaKnown RBP5.62□□□□□ -1.51
GABRA1-220ENST00000638159 CDC42BPGQ6DT37 1551 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms