RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 TRMT112Q9UI30 125 aaKnown RBP18.51■□□□□ 0.55
CACNA1A-249ENST00000637777 IBTKQ9P2D0 1353 aaPredicted RBP18.51■□□□□ 0.55
CACNA1A-249ENST00000637777 ATP5J2-PTCD1G3V325 749 aa18.5■□□□□ 0.55
CACNA1A-249ENST00000637777 C21orf2O43822 256 aa18.5■□□□□ 0.55
CACNA1A-249ENST00000637777 NTSR2O95665 410 aa18.5■□□□□ 0.55
CACNA1A-249ENST00000637777 ZNF526Q8TF50 670 aaPredicted RBP18.5■□□□□ 0.55
CACNA1A-249ENST00000637777 TNRC6CQ9HCJ0 1690 aaKnown RBP18.5■□□□□ 0.55
CACNA1A-249ENST00000637777 PRPF40BQ6NWY9 871 aaKnown RBP18.49■□□□□ 0.55
CACNA1A-249ENST00000637777 NLRP10Q86W26 655 aa18.49■□□□□ 0.55
CACNA1A-249ENST00000637777 MIER1Q8N108 512 aa18.49■□□□□ 0.55
CACNA1A-249ENST00000637777 RASSF7Q02833 373 aa18.48■□□□□ 0.55
CACNA1A-249ENST00000637777 MYD88Q99836 296 aa18.48■□□□□ 0.55
CACNA1A-249ENST00000637777 SPINK5Q9NQ38 1064 aaPredicted RBP18.48■□□□□ 0.55
CACNA1A-249ENST00000637777 RNF181Q9P0P0 153 aa18.48■□□□□ 0.55
CACNA1A-249ENST00000637777 SLX4Q8IY92 1834 aa18.47■□□□□ 0.55
CACNA1A-249ENST00000637777 SLC4A2P04920 1241 aa18.47■□□□□ 0.55
CACNA1A-249ENST00000637777 C9orf131Q5VYM1 1079 aa18.47■□□□□ 0.55
CACNA1A-249ENST00000637777 NLRP3Q96P20 1036 aa18.47■□□□□ 0.55
CACNA1A-249ENST00000637777 SH3TC1Q8TE82 1336 aa18.47■□□□□ 0.55
CACNA1A-249ENST00000637777 ALDH1B1P30837 517 aa18.46■□□□□ 0.55
CACNA1A-249ENST00000637777 RTL5Q5HYW3 569 aaPredicted RBP18.46■□□□□ 0.55
CACNA1A-249ENST00000637777 SOGA3Q5TF21 947 aa18.46■□□□□ 0.55
CACNA1A-249ENST00000637777 RNF123Q5XPI4 1314 aa18.46■□□□□ 0.55
CACNA1A-249ENST00000637777 HCLS1P14317 486 aaPredicted RBP18.45■□□□□ 0.54
CACNA1A-249ENST00000637777 NEXNQ0ZGT2 675 aa18.45■□□□□ 0.54
CACNA1A-249ENST00000637777 RBM17Q96I25 401 aaKnown RBP18.45■□□□□ 0.54
CACNA1A-249ENST00000637777 MAP3K2Q9Y2U5 619 aa18.45■□□□□ 0.54
CACNA1A-249ENST00000637777 CACNA1FO60840 1977 aa18.44■□□□□ 0.54
CACNA1A-249ENST00000637777 CCDC88AQ3V6T2 1871 aa18.44■□□□□ 0.54
CACNA1A-249ENST00000637777 FKBP5Q13451 457 aaPredicted RBP18.44■□□□□ 0.54
CACNA1A-249ENST00000637777 GPBP1L1Q9HC44 474 aaPredicted RBP18.44■□□□□ 0.54
CACNA1A-249ENST00000637777 RIC1Q4ADV7 1423 aa18.43■□□□□ 0.54
CACNA1A-249ENST00000637777 KLRG2A4D1S0 409 aaPredicted RBP18.43■□□□□ 0.54
CACNA1A-249ENST00000637777 E9PSI1 815 aa18.43■□□□□ 0.54
CACNA1A-249ENST00000637777 VAMP4O75379 141 aa18.43■□□□□ 0.54
CACNA1A-249ENST00000637777 CCDC93Q567U6 631 aa18.43■□□□□ 0.54
CACNA1A-249ENST00000637777 FAM89AQ96GI7 184 aa18.43■□□□□ 0.54
CACNA1A-249ENST00000637777 ISCA1Q9BUE6 129 aa18.43■□□□□ 0.54
CACNA1A-249ENST00000637777 TMX4Q9H1E5 349 aaPredicted RBP18.43■□□□□ 0.54
CACNA1A-249ENST00000637777 SBF1O95248 1867 aa18.42■□□□□ 0.54
CACNA1A-249ENST00000637777 PI4KAP2A4QPH2 592 aa18.42■□□□□ 0.54
CACNA1A-249ENST00000637777 LMNB1P20700 586 aa18.42■□□□□ 0.54
CACNA1A-249ENST00000637777 FLIIQ13045 1269 aa18.42■□□□□ 0.54
CACNA1A-249ENST00000637777 KSR2Q6VAB6 950 aa18.42■□□□□ 0.54
CACNA1A-249ENST00000637777 SYNE4Q8N205 404 aa18.42■□□□□ 0.54
CACNA1A-249ENST00000637777 PI4KAP1Q8N8J0 262 aa18.42■□□□□ 0.54
CACNA1A-249ENST00000637777 TAOK3Q9H2K8 898 aa18.42■□□□□ 0.54
CACNA1A-249ENST00000637777 ZNF521Q96K83 1311 aa18.42■□□□□ 0.54
CACNA1A-249ENST00000637777 LAMB2P55268 1798 aa18.41■□□□□ 0.54
CACNA1A-249ENST00000637777 CRY2Q49AN0 593 aa18.41■□□□□ 0.54
CACNA1A-249ENST00000637777 C3orf67Q6ZVT6 689 aa18.41■□□□□ 0.54
CACNA1A-249ENST00000637777 G2E3Q7L622 706 aa18.41■□□□□ 0.54
CACNA1A-249ENST00000637777 METTL22Q9BUU2 404 aaPredicted RBP18.41■□□□□ 0.54
CACNA1A-249ENST00000637777 CWC25Q9NXE8 425 aaPredicted RBP18.41■□□□□ 0.54
CACNA1A-249ENST00000637777 ADCY9O60503 1353 aa18.41■□□□□ 0.54
CACNA1A-249ENST00000637777 FER1L6Q2WGJ9 1857 aa18.4■□□□□ 0.54
CACNA1A-249ENST00000637777 NFKBIEO00221 500 aa18.4■□□□□ 0.54
CACNA1A-249ENST00000637777 PPEF1O14829 653 aaPredicted RBP18.4■□□□□ 0.54
CACNA1A-249ENST00000637777 DDX46Q7L014 1031 aaKnown RBP18.4■□□□□ 0.54
CACNA1A-249ENST00000637777 IRS4O14654 1257 aaPredicted RBP18.39■□□□□ 0.53
CACNA1A-249ENST00000637777 HSP90B1P14625 803 aaKnown RBP18.39■□□□□ 0.53
CACNA1A-249ENST00000637777 SLC10A5Q5PT55 438 aa18.39■□□□□ 0.53
CACNA1A-249ENST00000637777 CCDC191Q8NCU4 936 aa18.39■□□□□ 0.53
CACNA1A-249ENST00000637777 TIAM2Q8IVF5 1701 aa18.38■□□□□ 0.53
CACNA1A-249ENST00000637777 DDX60Q8IY21 1712 aaKnown RBP18.38■□□□□ 0.53
CACNA1A-249ENST00000637777 TRIM28Q13263 835 aaKnown RBP18.38■□□□□ 0.53
CACNA1A-249ENST00000637777 OLFM4Q6UX06 510 aa18.38■□□□□ 0.53
CACNA1A-249ENST00000637777 ZBTB38Q8NAP3 1195 aaPredicted RBP18.38■□□□□ 0.53
CACNA1A-249ENST00000637777 HOXA10P31260 410 aaPredicted RBP18.37■□□□□ 0.53
CACNA1A-249ENST00000637777 RTKN2Q8IZC4 609 aa18.37■□□□□ 0.53
CACNA1A-249ENST00000637777 JARID2Q92833 1246 aaPredicted RBP18.37■□□□□ 0.53
CACNA1A-249ENST00000637777 CDCA7LQ96GN5 454 aa18.37■□□□□ 0.53
CACNA1A-249ENST00000637777 CRAMP1Q96RY5 1269 aa18.37■□□□□ 0.53
CACNA1A-249ENST00000637777 ABCC4O15439 1325 aa18.36■□□□□ 0.53
CACNA1A-249ENST00000637777 HNRNPUQ00839 825 aaKnown RBP eCLIP18.36■□□□□ 0.53
CACNA1A-249ENST00000637777 SLFN5Q08AF3 891 aa18.36■□□□□ 0.53
CACNA1A-249ENST00000637777 DNAAF4Q8WXU2 420 aa18.36■□□□□ 0.53
CACNA1A-249ENST00000637777 KDM2BQ8NHM5 1336 aa18.35■□□□□ 0.53
CACNA1A-249ENST00000637777 PCCAP05165 728 aaPredicted RBP18.35■□□□□ 0.53
CACNA1A-249ENST00000637777 FKBP4Q02790 459 aaKnown RBP eCLIP18.35■□□□□ 0.53
CACNA1A-249ENST00000637777 CWF19L2Q2TBE0 894 aaKnown RBP18.35■□□□□ 0.53
CACNA1A-249ENST00000637777 LTBP3Q9NS15 1303 aa18.34■□□□□ 0.53
CACNA1A-249ENST00000637777 CC2D2BQ6DHV5 1058 aa18.34■□□□□ 0.53
CACNA1A-249ENST00000637777 C7orf43Q8WVR3 580 aa18.34■□□□□ 0.53
CACNA1A-249ENST00000637777 ZNF277Q9NRM2 450 aaPredicted RBP18.34■□□□□ 0.53
CACNA1A-249ENST00000637777 TAF1P21675 1872 aa18.34■□□□□ 0.53
CACNA1A-249ENST00000637777 DICER1Q9UPY3 1922 aaKnown RBP18.33■□□□□ 0.53
CACNA1A-249ENST00000637777 NEURL1BA8MQ27 555 aa18.33■□□□□ 0.52
CACNA1A-249ENST00000637777 F6X3S4 739 aa18.33■□□□□ 0.52
CACNA1A-249ENST00000637777 IGKV5-2P06315 115 aa18.33■□□□□ 0.52
CACNA1A-249ENST00000637777 GRAPQ13588 217 aa18.33■□□□□ 0.52
CACNA1A-249ENST00000637777 SLC4A10Q6U841 1118 aa18.33■□□□□ 0.52
CACNA1A-249ENST00000637777 GRAPLQ8TC17 118 aaPredicted RBP18.33■□□□□ 0.52
CACNA1A-249ENST00000637777 CCDC85AQ96PX6 553 aaPredicted RBP18.33■□□□□ 0.52
CACNA1A-249ENST00000637777 ZC3H4Q9UPT8 1303 aaKnown RBP18.32■□□□□ 0.52
CACNA1A-249ENST00000637777 PRELPP51888 382 aa18.32■□□□□ 0.52
CACNA1A-249ENST00000637777 CCDC152Q4G0S7 254 aa18.32■□□□□ 0.52
CACNA1A-249ENST00000637777 UBE3BQ7Z3V4 1068 aa18.32■□□□□ 0.52
CACNA1A-249ENST00000637777 C16orf71Q8IYS4 520 aaPredicted RBP18.32■□□□□ 0.52
CACNA1A-249ENST00000637777 BCL2L13Q9BXK5 485 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms