RNA–Protein interactions for RNA: ENST00000637555.1

CNTNAP2-220, Transcript of contactin associated protein like 2, humanhuman

TSL 5

Gene CNTNAP2, Length 2,341 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP2-220ENST00000637555 SF3B2Q13435 895 aaKnown RBP15.87■□□□□ 0.13
CNTNAP2-220ENST00000637555 UTYO14607 1347 aa15.87■□□□□ 0.13
CNTNAP2-220ENST00000637555 ATP5J2-PTCD1G3V325 749 aa15.86■□□□□ 0.13
CNTNAP2-220ENST00000637555 RGL2O15211 777 aa15.86■□□□□ 0.13
CNTNAP2-220ENST00000637555 ADRA2BP18089 450 aa15.86■□□□□ 0.13
CNTNAP2-220ENST00000637555 HDAC1Q13547 482 aaPredicted RBP15.86■□□□□ 0.13
CNTNAP2-220ENST00000637555 ARHGEF1Q92888 912 aaKnown RBP15.86■□□□□ 0.13
CNTNAP2-220ENST00000637555 NARFQ9UHQ1 456 aa15.86■□□□□ 0.13
CNTNAP2-220ENST00000637555 SSFA2P28290 1259 aa15.86■□□□□ 0.13
CNTNAP2-220ENST00000637555 GCKRQ14397 625 aa15.86■□□□□ 0.13
CNTNAP2-220ENST00000637555 ARXQ96QS3 562 aa15.86■□□□□ 0.13
CNTNAP2-220ENST00000637555 CHMP4BQ9H444 224 aaKnown RBP15.86■□□□□ 0.13
CNTNAP2-220ENST00000637555 BCL2L12Q9HB09 334 aa15.86■□□□□ 0.13
CNTNAP2-220ENST00000637555 TRIM28Q13263 835 aaKnown RBP15.85■□□□□ 0.13
CNTNAP2-220ENST00000637555 TBC1D32Q96NH3 1257 aa15.85■□□□□ 0.13
CNTNAP2-220ENST00000637555 HSP90AB3PQ58FF7 597 aa15.85■□□□□ 0.13
CNTNAP2-220ENST00000637555 ZNF34Q8IZ26 560 aa15.85■□□□□ 0.13
CNTNAP2-220ENST00000637555 SRP68Q9UHB9 627 aaKnown RBP15.85■□□□□ 0.13
CNTNAP2-220ENST00000637555 USP42Q9H9J4 1324 aaKnown RBP15.85■□□□□ 0.13
CNTNAP2-220ENST00000637555 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.84■□□□□ 0.13
CNTNAP2-220ENST00000637555 PHF14O94880 888 aa15.84■□□□□ 0.13
CNTNAP2-220ENST00000637555 NBPF7P0C2Y1 421 aaPredicted RBP15.84■□□□□ 0.13
CNTNAP2-220ENST00000637555 TRAPPC3LQ5T215 181 aa15.84■□□□□ 0.13
CNTNAP2-220ENST00000637555 C1orf115Q9H7X2 142 aa15.84■□□□□ 0.13
CNTNAP2-220ENST00000637555 GNAI3P08754 354 aa15.84■□□□□ 0.13
CNTNAP2-220ENST00000637555 CCDC191Q8NCU4 936 aa15.84■□□□□ 0.13
CNTNAP2-220ENST00000637555 ANO8Q9HCE9 1232 aaPredicted RBP15.84■□□□□ 0.13
CNTNAP2-220ENST00000637555 UBN2Q6ZU65 1347 aa15.84■□□□□ 0.13
CNTNAP2-220ENST00000637555 GRM8O00222 908 aa15.83■□□□□ 0.12
CNTNAP2-220ENST00000637555 CASP7P55210 303 aa15.83■□□□□ 0.12
CNTNAP2-220ENST00000637555 USPL1Q5W0Q7 1092 aa15.83■□□□□ 0.12
CNTNAP2-220ENST00000637555 CLEC4GQ6UXB4 293 aa15.83■□□□□ 0.12
CNTNAP2-220ENST00000637555 CWC25Q9NXE8 425 aaPredicted RBP15.83■□□□□ 0.12
CNTNAP2-220ENST00000637555 GSE1Q14687 1217 aa15.83■□□□□ 0.12
CNTNAP2-220ENST00000637555 NLRP10Q86W26 655 aa15.83■□□□□ 0.12
CNTNAP2-220ENST00000637555 SMC5Q8IY18 1101 aa15.83■□□□□ 0.12
CNTNAP2-220ENST00000637555 UPF1Q92900 1129 aaKnown RBP eCLIP15.83■□□□□ 0.12
CNTNAP2-220ENST00000637555 SLKQ9H2G2 1235 aaPredicted RBP15.82■□□□□ 0.12
CNTNAP2-220ENST00000637555 H7C1W4 665 aa15.82■□□□□ 0.12
CNTNAP2-220ENST00000637555 UBTFL1P0CB47 393 aaPredicted RBP15.82■□□□□ 0.12
CNTNAP2-220ENST00000637555 GPTP24298 496 aa15.82■□□□□ 0.12
CNTNAP2-220ENST00000637555 ZNF652Q9Y2D9 606 aa15.82■□□□□ 0.12
CNTNAP2-220ENST00000637555 RFC4P35249 363 aa15.81■□□□□ 0.12
CNTNAP2-220ENST00000637555 IL27Q8NEV9 243 aa15.81■□□□□ 0.12
CNTNAP2-220ENST00000637555 C9orf78Q9NZ63 289 aaPredicted RBP15.81■□□□□ 0.12
CNTNAP2-220ENST00000637555 PNPLA7Q6ZV29 1317 aa15.81■□□□□ 0.12
CNTNAP2-220ENST00000637555 NRXN2Q9P2S2 1712 aa15.81■□□□□ 0.12
CNTNAP2-220ENST00000637555 ZPR1O75312 459 aa15.8■□□□□ 0.12
CNTNAP2-220ENST00000637555 GNAI2P04899 355 aa15.8■□□□□ 0.12
CNTNAP2-220ENST00000637555 KAZALD1Q96I82 304 aa15.8■□□□□ 0.12
CNTNAP2-220ENST00000637555 TBC1D2Q9BYX2 928 aa15.8■□□□□ 0.12
CNTNAP2-220ENST00000637555 TFCP2L1Q9NZI6 479 aa15.8■□□□□ 0.12
CNTNAP2-220ENST00000637555 LRRFIP2Q9Y608 721 aaKnown RBP15.8■□□□□ 0.12
CNTNAP2-220ENST00000637555 SLC15A2Q16348 729 aa15.8■□□□□ 0.12
CNTNAP2-220ENST00000637555 COL23A1Q86Y22 540 aaPredicted RBP15.8■□□□□ 0.12
CNTNAP2-220ENST00000637555 SIRT2Q8IXJ6 389 aa15.8■□□□□ 0.12
CNTNAP2-220ENST00000637555 TBC1D9BQ66K14 1250 aa15.79■□□□□ 0.12
CNTNAP2-220ENST00000637555 CEP85Q6P2H3 762 aa15.79■□□□□ 0.12
CNTNAP2-220ENST00000637555 SUCLG2Q96I99 432 aa15.79■□□□□ 0.12
CNTNAP2-220ENST00000637555 ANTXR1Q9H6X2 564 aa15.79■□□□□ 0.12
CNTNAP2-220ENST00000637555 UBE3BQ7Z3V4 1068 aa15.79■□□□□ 0.12
CNTNAP2-220ENST00000637555 ANKRD44Q8N8A2 993 aa15.79■□□□□ 0.12
CNTNAP2-220ENST00000637555 JARID2Q92833 1246 aaPredicted RBP15.79■□□□□ 0.12
CNTNAP2-220ENST00000637555 PCCAP05165 728 aaPredicted RBP15.78■□□□□ 0.12
CNTNAP2-220ENST00000637555 GYS1P13807 737 aa15.78■□□□□ 0.12
CNTNAP2-220ENST00000637555 MFAP1P55081 439 aaKnown RBP15.78■□□□□ 0.12
CNTNAP2-220ENST00000637555 SUSD4Q5VX71 490 aa15.78■□□□□ 0.12
CNTNAP2-220ENST00000637555 ILDR2Q71H61 639 aa15.78■□□□□ 0.12
CNTNAP2-220ENST00000637555 LNPKQ9C0E8 428 aa15.78■□□□□ 0.12
CNTNAP2-220ENST00000637555 UPF2Q9HAU5 1272 aaKnown RBP15.78■□□□□ 0.12
CNTNAP2-220ENST00000637555 NIP7Q9Y221 180 aaKnown RBP eCLIP15.78■□□□□ 0.12
CNTNAP2-220ENST00000637555 PARP10Q53GL7 1025 aa15.78■□□□□ 0.12
CNTNAP2-220ENST00000637555 FLAD1Q8NFF5 587 aa15.78■□□□□ 0.12
CNTNAP2-220ENST00000637555 STK32BQ9NY57 414 aa15.78■□□□□ 0.12
CNTNAP2-220ENST00000637555 TNRC6CQ9HCJ0 1690 aaKnown RBP15.77■□□□□ 0.12
CNTNAP2-220ENST00000637555 CDHR2Q9BYE9 1310 aa15.77■□□□□ 0.12
CNTNAP2-220ENST00000637555 NTSR2O95665 410 aa15.77■□□□□ 0.12
CNTNAP2-220ENST00000637555 NUCB1Q02818 461 aa15.77■□□□□ 0.12
CNTNAP2-220ENST00000637555 BECN1Q14457 450 aa15.77■□□□□ 0.12
CNTNAP2-220ENST00000637555 ZBTB38Q8NAP3 1195 aaPredicted RBP15.77■□□□□ 0.12
CNTNAP2-220ENST00000637555 EPHA10Q5JZY3 1008 aa15.77■□□□□ 0.11
CNTNAP2-220ENST00000637555 RPAP2Q8IXW5 612 aaPredicted RBP15.77■□□□□ 0.11
CNTNAP2-220ENST00000637555 SPRYD3Q8NCJ5 442 aa15.77■□□□□ 0.11
CNTNAP2-220ENST00000637555 ANKRD31Q8N7Z5 1873 aa15.76■□□□□ 0.11
CNTNAP2-220ENST00000637555 MTX1Q13505 466 aa15.76■□□□□ 0.11
CNTNAP2-220ENST00000637555 SYNE4Q8N205 404 aa15.76■□□□□ 0.11
CNTNAP2-220ENST00000637555 FAM89AQ96GI7 184 aa15.76■□□□□ 0.11
CNTNAP2-220ENST00000637555 C22orf23Q9BZE7 217 aa15.76■□□□□ 0.11
CNTNAP2-220ENST00000637555 BICC1Q9H694 974 aaKnown RBP15.76■□□□□ 0.11
CNTNAP2-220ENST00000637555 SPEF2Q9C093 1822 aa15.75■□□□□ 0.11
CNTNAP2-220ENST00000637555 FOXO4P98177 505 aa15.75■□□□□ 0.11
CNTNAP2-220ENST00000637555 ATP8B2P98198 1209 aa15.75■□□□□ 0.11
CNTNAP2-220ENST00000637555 HDAC5Q9UQL6 1122 aa15.75■□□□□ 0.11
CNTNAP2-220ENST00000637555 PNMA6EA0A0J9YXQ4 647 aa15.74■□□□□ 0.11
CNTNAP2-220ENST00000637555 NFIXQ14938 502 aa15.74■□□□□ 0.11
CNTNAP2-220ENST00000637555 RABL6Q3YEC7 729 aaPredicted RBP15.74■□□□□ 0.11
CNTNAP2-220ENST00000637555 UTP14AQ9BVJ6 771 aaKnown RBP15.74■□□□□ 0.11
CNTNAP2-220ENST00000637555 PLA2G12BQ9BX93 195 aa15.74■□□□□ 0.11
CNTNAP2-220ENST00000637555 TRMT112Q9UI30 125 aaKnown RBP15.74■□□□□ 0.11
CNTNAP2-220ENST00000637555 TM4SF1P30408 202 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms