RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 CCDC88AQ3V6T2 1871 aa24.61■■□□□ 1.53
CLN6-221ENST00000637494 RIC1Q4ADV7 1423 aa24.61■■□□□ 1.53
CLN6-221ENST00000637494 NTSR2O95665 410 aa24.6■■□□□ 1.53
CLN6-221ENST00000637494 CHPF2Q9P2E5 772 aa24.6■■□□□ 1.53
CLN6-221ENST00000637494 CRY2Q49AN0 593 aa24.59■■□□□ 1.53
CLN6-221ENST00000637494 DUSP27Q5VZP5 1158 aa24.59■■□□□ 1.53
CLN6-221ENST00000637494 RBM17Q96I25 401 aaKnown RBP24.59■■□□□ 1.53
CLN6-221ENST00000637494 NLRP3Q96P20 1036 aa24.59■■□□□ 1.53
CLN6-221ENST00000637494 CHMP4AQ9BY43 222 aa24.59■■□□□ 1.53
CLN6-221ENST00000637494 RNF123Q5XPI4 1314 aa24.59■■□□□ 1.53
CLN6-221ENST00000637494 VEGFAP15692 232 aaPredicted RBP24.58■■□□□ 1.53
CLN6-221ENST00000637494 FKBP4Q02790 459 aaKnown RBP eCLIP24.58■■□□□ 1.53
CLN6-221ENST00000637494 C7orf43Q8WVR3 580 aa24.58■■□□□ 1.53
CLN6-221ENST00000637494 HYPKQ9NX55 129 aa24.58■■□□□ 1.53
CLN6-221ENST00000637494 TMX4Q9H1E5 349 aaPredicted RBP24.57■■□□□ 1.52
CLN6-221ENST00000637494 ZNF853P0CG23 659 aa24.56■■□□□ 1.52
CLN6-221ENST00000637494 FSTL1Q12841 308 aa24.56■■□□□ 1.52
CLN6-221ENST00000637494 TCIRG1Q13488 830 aa24.56■■□□□ 1.52
CLN6-221ENST00000637494 CC2D2BQ6DHV5 1058 aa24.56■■□□□ 1.52
CLN6-221ENST00000637494 MRS2Q9HD23 443 aa24.56■■□□□ 1.52
CLN6-221ENST00000637494 DICER1Q9UPY3 1922 aaKnown RBP24.55■■□□□ 1.52
CLN6-221ENST00000637494 HOXA10P31260 410 aaPredicted RBP24.55■■□□□ 1.52
CLN6-221ENST00000637494 APLP1P51693 650 aa24.55■■□□□ 1.52
CLN6-221ENST00000637494 GRIPAP1Q4V328 841 aa24.54■■□□□ 1.52
CLN6-221ENST00000637494 ANKRD13DQ6ZTN6 518 aa24.54■■□□□ 1.52
CLN6-221ENST00000637494 PLBD2Q8NHP8 589 aa24.54■■□□□ 1.52
CLN6-221ENST00000637494 CRAMP1Q96RY5 1269 aa24.54■■□□□ 1.52
CLN6-221ENST00000637494 TRMT112Q9UI30 125 aaKnown RBP24.54■■□□□ 1.52
CLN6-221ENST00000637494 ANKRD36CQ5JPF3 1778 aa24.54■■□□□ 1.52
CLN6-221ENST00000637494 CCDC184Q52MB2 194 aa24.53■■□□□ 1.52
CLN6-221ENST00000637494 SLC10A5Q5PT55 438 aa24.53■■□□□ 1.52
CLN6-221ENST00000637494 NLRP10Q86W26 655 aa24.53■■□□□ 1.52
CLN6-221ENST00000637494 SMC1BQ8NDV3 1235 aa24.52■■□□□ 1.52
CLN6-221ENST00000637494 ZNF277Q9NRM2 450 aaPredicted RBP24.52■■□□□ 1.52
CLN6-221ENST00000637494 ELL2O00472 640 aaPredicted RBP24.51■■□□□ 1.51
CLN6-221ENST00000637494 SYNE4Q8N205 404 aa24.51■■□□□ 1.51
CLN6-221ENST00000637494 SH3TC1Q8TE82 1336 aa24.51■■□□□ 1.51
CLN6-221ENST00000637494 PPEF1O14829 653 aaPredicted RBP24.5■■□□□ 1.51
CLN6-221ENST00000637494 GOLGA2Q08379 1002 aa24.5■■□□□ 1.51
CLN6-221ENST00000637494 CCDC27Q2M243 656 aa24.5■■□□□ 1.51
CLN6-221ENST00000637494 OLFM4Q6UX06 510 aa24.5■■□□□ 1.51
CLN6-221ENST00000637494 IARSP41252 1262 aaKnown RBP24.49■■□□□ 1.51
CLN6-221ENST00000637494 PSMD1Q99460 953 aa24.49■■□□□ 1.51
CLN6-221ENST00000637494 CCDC30Q5VVM6 783 aa24.48■■□□□ 1.51
CLN6-221ENST00000637494 RIC3Q7Z5B4 369 aa24.48■■□□□ 1.51
CLN6-221ENST00000637494 JDP2Q8WYK2 163 aa24.48■■□□□ 1.51
CLN6-221ENST00000637494 WDR90Q96KV7 1748 aa24.48■■□□□ 1.51
CLN6-221ENST00000637494 TCERG1O14776 1098 aaKnown RBP24.47■■□□□ 1.51
CLN6-221ENST00000637494 DDNO94850 711 aaPredicted RBP24.47■■□□□ 1.51
CLN6-221ENST00000637494 IQCA1LA6NCM1 817 aa24.46■■□□□ 1.51
CLN6-221ENST00000637494 HCLS1P14317 486 aaPredicted RBP24.46■■□□□ 1.51
CLN6-221ENST00000637494 C3orf67Q6ZVT6 689 aa24.46■■□□□ 1.51
CLN6-221ENST00000637494 DDX46Q7L014 1031 aaKnown RBP24.46■■□□□ 1.51
CLN6-221ENST00000637494 DDX58O95786 925 aaKnown RBP24.45■■□□□ 1.5
CLN6-221ENST00000637494 NCBP3Q53F19 620 aaKnown RBP24.45■■□□□ 1.5
CLN6-221ENST00000637494 C8orf58Q8NAV2 365 aa24.45■■□□□ 1.5
CLN6-221ENST00000637494 ATP5J2-PTCD1G3V325 749 aa24.44■■□□□ 1.5
CLN6-221ENST00000637494 BBOX1O75936 387 aa24.44■■□□□ 1.5
CLN6-221ENST00000637494 WWC1Q8IX03 1113 aa24.44■■□□□ 1.5
CLN6-221ENST00000637494 ISCA1Q9BUE6 129 aa24.44■■□□□ 1.5
CLN6-221ENST00000637494 ABCC4O15439 1325 aa24.43■■□□□ 1.5
CLN6-221ENST00000637494 HSP90B1P14625 803 aaKnown RBP24.43■■□□□ 1.5
CLN6-221ENST00000637494 ATP6V0A2Q9Y487 856 aa24.43■■□□□ 1.5
CLN6-221ENST00000637494 POTECB2RU33 542 aa24.42■■□□□ 1.5
CLN6-221ENST00000637494 SUPT20HQ8NEM7 779 aa24.42■■□□□ 1.5
CLN6-221ENST00000637494 STK31Q9BXU1 1019 aa24.42■■□□□ 1.5
CLN6-221ENST00000637494 PHAXQ9H814 394 aaKnown RBP24.42■■□□□ 1.5
CLN6-221ENST00000637494 IL16Q14005 1332 aa24.41■■□□□ 1.5
CLN6-221ENST00000637494 EIF6P56537 245 aaKnown RBP24.41■■□□□ 1.5
CLN6-221ENST00000637494 TRIM28Q13263 835 aaKnown RBP24.41■■□□□ 1.5
CLN6-221ENST00000637494 LARGE2Q8N3Y3 721 aa24.41■■□□□ 1.5
CLN6-221ENST00000637494 TSR2Q969E8 191 aaKnown RBP24.41■■□□□ 1.5
CLN6-221ENST00000637494 FAM89AQ96GI7 184 aa24.41■■□□□ 1.5
CLN6-221ENST00000637494 FZD9O00144 591 aa24.4■■□□□ 1.5
CLN6-221ENST00000637494 GRAPQ13588 217 aa24.4■■□□□ 1.5
CLN6-221ENST00000637494 TMC4Q7Z404 712 aa24.4■■□□□ 1.5
CLN6-221ENST00000637494 GRAPLQ8TC17 118 aaPredicted RBP24.4■■□□□ 1.5
CLN6-221ENST00000637494 ZNF428Q96B54 188 aa24.4■■□□□ 1.5
CLN6-221ENST00000637494 L3MBTL3Q96JM7 780 aaPredicted RBP24.4■■□□□ 1.5
CLN6-221ENST00000637494 ZNF541Q9H0D2 1346 aa24.39■■□□□ 1.5
CLN6-221ENST00000637494 SNED1Q8TER0 1413 aa24.39■■□□□ 1.5
CLN6-221ENST00000637494 SP8Q8IXZ3 490 aa24.39■■□□□ 1.49
CLN6-221ENST00000637494 MYD88Q99836 296 aa24.39■■□□□ 1.49
CLN6-221ENST00000637494 VPS33BQ9H267 617 aa24.39■■□□□ 1.49
CLN6-221ENST00000637494 DPP8Q6V1X1 898 aaPredicted RBP24.38■■□□□ 1.49
CLN6-221ENST00000637494 NIM1KQ8IY84 436 aa24.38■■□□□ 1.49
CLN6-221ENST00000637494 GPC2Q8N158 579 aa24.38■■□□□ 1.49
CLN6-221ENST00000637494 LAMB2P55268 1798 aa24.38■■□□□ 1.49
CLN6-221ENST00000637494 PPIP5K2O43314 1243 aa24.37■■□□□ 1.49
CLN6-221ENST00000637494 TWISTNBQ3B726 338 aaPredicted RBP24.37■■□□□ 1.49
CLN6-221ENST00000637494 RTL5Q5HYW3 569 aaPredicted RBP24.37■■□□□ 1.49
CLN6-221ENST00000637494 CHADLQ6NUI6 762 aa24.37■■□□□ 1.49
CLN6-221ENST00000637494 TSPYL6Q8N831 410 aa24.37■■□□□ 1.49
CLN6-221ENST00000637494 HACL1Q9UJ83 578 aa24.37■■□□□ 1.49
CLN6-221ENST00000637494 SALL2Q9Y467 1007 aaPredicted RBP24.37■■□□□ 1.49
CLN6-221ENST00000637494 SCN4AP35499 1836 aa24.36■■□□□ 1.49
CLN6-221ENST00000637494 IRS4O14654 1257 aaPredicted RBP24.36■■□□□ 1.49
CLN6-221ENST00000637494 WDR63Q8IWG1 891 aa24.36■■□□□ 1.49
CLN6-221ENST00000637494 MPNDQ8N594 471 aa24.36■■□□□ 1.49
CLN6-221ENST00000637494 ZBTB38Q8NAP3 1195 aaPredicted RBP24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms