RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 NPHP3Q7Z494 1330 aa18.44■□□□□ 0.54
CLN5-218ENST00000637397 NMIQ13287 307 aaPredicted RBP18.44■□□□□ 0.54
CLN5-218ENST00000637397 PODXL2Q9NZ53 605 aa18.44■□□□□ 0.54
CLN5-218ENST00000637397 LRP2BPQ9P2M1 347 aa18.44■□□□□ 0.54
CLN5-218ENST00000637397 CCDC181Q5TID7 509 aa18.43■□□□□ 0.54
CLN5-218ENST00000637397 ANTXR1Q9H6X2 564 aa18.43■□□□□ 0.54
CLN5-218ENST00000637397 GNL3LQ9NVN8 582 aaKnown RBP18.43■□□□□ 0.54
CLN5-218ENST00000637397 IGSF3O75054 1194 aa18.43■□□□□ 0.54
CLN5-218ENST00000637397 TRIM34Q9BYJ4 488 aa18.43■□□□□ 0.54
CLN5-218ENST00000637397 CCDC171Q6TFL3 1326 aa18.43■□□□□ 0.54
CLN5-218ENST00000637397 ZFYVE9O95405 1425 aa18.43■□□□□ 0.54
CLN5-218ENST00000637397 KIF5CO60282 957 aa18.43■□□□□ 0.54
CLN5-218ENST00000637397 GSPT1P15170 499 aaKnown RBP18.43■□□□□ 0.54
CLN5-218ENST00000637397 ANKLE2Q86XL3 938 aa18.43■□□□□ 0.54
CLN5-218ENST00000637397 C17orf53Q8N3J3 647 aaPredicted RBP18.43■□□□□ 0.54
CLN5-218ENST00000637397 CCDC94Q9BW85 323 aaPredicted RBP18.43■□□□□ 0.54
CLN5-218ENST00000637397 GTF2F1P35269 517 aaKnown RBP eCLIP18.42■□□□□ 0.54
CLN5-218ENST00000637397 PKP1Q13835 747 aa18.42■□□□□ 0.54
CLN5-218ENST00000637397 Q6ZUG5 572 aa18.42■□□□□ 0.54
CLN5-218ENST00000637397 NAPBQ9H115 298 aa18.42■□□□□ 0.54
CLN5-218ENST00000637397 PRDM11Q9NQV5 511 aa18.42■□□□□ 0.54
CLN5-218ENST00000637397 CEP131Q9UPN4 1083 aa18.42■□□□□ 0.54
CLN5-218ENST00000637397 ABCF2Q9UG63 623 aa18.42■□□□□ 0.54
CLN5-218ENST00000637397 GADD45BO75293 160 aaPredicted RBP18.42■□□□□ 0.54
CLN5-218ENST00000637397 IL13P35225 146 aa18.42■□□□□ 0.54
CLN5-218ENST00000637397 EIF5P55010 431 aaKnown RBP18.42■□□□□ 0.54
CLN5-218ENST00000637397 PHAXQ9H814 394 aaKnown RBP18.42■□□□□ 0.54
CLN5-218ENST00000637397 CREB3L3Q68CJ9 461 aa18.41■□□□□ 0.54
CLN5-218ENST00000637397 CCDC144CPQ8IYA2 1237 aa18.41■□□□□ 0.54
CLN5-218ENST00000637397 AOPEPQ8N6M6 819 aa18.41■□□□□ 0.54
CLN5-218ENST00000637397 NPATQ14207 1427 aa18.41■□□□□ 0.54
CLN5-218ENST00000637397 BMS1Q14692 1282 aaKnown RBP18.41■□□□□ 0.54
CLN5-218ENST00000637397 KRT222Q8N1A0 295 aa18.41■□□□□ 0.54
CLN5-218ENST00000637397 RAI14Q9P0K7 980 aa18.41■□□□□ 0.54
CLN5-218ENST00000637397 FSD2A1L4K1 749 aa18.41■□□□□ 0.54
CLN5-218ENST00000637397 GRM8O00222 908 aa18.41■□□□□ 0.54
CLN5-218ENST00000637397 CEBPAP49715 358 aaPredicted RBP18.4■□□□□ 0.54
CLN5-218ENST00000637397 JAKMIP3Q5VZ66 844 aa18.4■□□□□ 0.54
CLN5-218ENST00000637397 KIAA1328Q86T90 577 aa18.4■□□□□ 0.54
CLN5-218ENST00000637397 FAM173BQ6P4H8 233 aa18.4■□□□□ 0.54
CLN5-218ENST00000637397 MICU3Q86XE3 530 aa18.4■□□□□ 0.54
CLN5-218ENST00000637397 TANGO6Q9C0B7 1094 aa18.4■□□□□ 0.54
CLN5-218ENST00000637397 ZBTB3Q9H5J0 574 aa18.4■□□□□ 0.54
CLN5-218ENST00000637397 ZSWIM4Q9H7M6 989 aa18.4■□□□□ 0.54
CLN5-218ENST00000637397 CALCOCO1Q9P1Z2 691 aa18.4■□□□□ 0.54
CLN5-218ENST00000637397 TTC41PQ6P2S7 1318 aa18.4■□□□□ 0.54
CLN5-218ENST00000637397 MINDY4BA8MYZ0 360 aa18.4■□□□□ 0.54
CLN5-218ENST00000637397 GNG11P61952 73 aa18.4■□□□□ 0.54
CLN5-218ENST00000637397 CCDC150Q8NCX0 1101 aa18.4■□□□□ 0.54
CLN5-218ENST00000637397 SLC12A7Q9Y666 1083 aa18.4■□□□□ 0.54
CLN5-218ENST00000637397 GOLGA8AA7E2F4 631 aa18.39■□□□□ 0.53
CLN5-218ENST00000637397 IFIT5Q13325 482 aaKnown RBP18.39■□□□□ 0.53
CLN5-218ENST00000637397 HSP90AA4PQ58FG1 418 aa18.39■□□□□ 0.53
CLN5-218ENST00000637397 RUFY3Q7L099 469 aa18.39■□□□□ 0.53
CLN5-218ENST00000637397 KIF21AQ7Z4S6 1674 aa18.39■□□□□ 0.53
CLN5-218ENST00000637397 CWF19L2Q2TBE0 894 aaKnown RBP18.39■□□□□ 0.53
CLN5-218ENST00000637397 SAMD1Q6SPF0 538 aaPredicted RBP18.39■□□□□ 0.53
CLN5-218ENST00000637397 MRPS27Q92552 414 aaKnown RBP18.39■□□□□ 0.53
CLN5-218ENST00000637397 CHAMP1Q96JM3 812 aa18.39■□□□□ 0.53
CLN5-218ENST00000637397 DNAI1Q9UI46 699 aa18.39■□□□□ 0.53
CLN5-218ENST00000637397 ABCC10Q5T3U5 1492 aa18.39■□□□□ 0.53
CLN5-218ENST00000637397 RIMS2Q9UQ26 1411 aa18.39■□□□□ 0.53
CLN5-218ENST00000637397 ZMYM3Q14202 1370 aa18.39■□□□□ 0.53
CLN5-218ENST00000637397 IFIT3O14879 490 aaKnown RBP18.39■□□□□ 0.53
CLN5-218ENST00000637397 ANKRD13DQ6ZTN6 518 aa18.39■□□□□ 0.53
CLN5-218ENST00000637397 EYA1Q99502 592 aa18.39■□□□□ 0.53
CLN5-218ENST00000637397 MAST1Q9Y2H9 1570 aa18.38■□□□□ 0.53
CLN5-218ENST00000637397 ALDH1L1O75891 902 aa18.38■□□□□ 0.53
CLN5-218ENST00000637397 KSR2Q6VAB6 950 aa18.38■□□□□ 0.53
CLN5-218ENST00000637397 ABCC1P33527 1531 aa18.38■□□□□ 0.53
CLN5-218ENST00000637397 PNMA6EA0A0J9YXQ4 647 aa18.38■□□□□ 0.53
CLN5-218ENST00000637397 CHL1O00533 1208 aa18.38■□□□□ 0.53
CLN5-218ENST00000637397 IARSP41252 1262 aaKnown RBP18.38■□□□□ 0.53
CLN5-218ENST00000637397 GBP3Q9H0R5 595 aa18.38■□□□□ 0.53
CLN5-218ENST00000637397 KLF18A0A0U1RQI7 1052 aa18.38■□□□□ 0.53
CLN5-218ENST00000637397 UBASH3AP57075 661 aa18.38■□□□□ 0.53
CLN5-218ENST00000637397 CCDC102BQ68D86 513 aa18.38■□□□□ 0.53
CLN5-218ENST00000637397 CD2BP2O95400 341 aaKnown RBP18.37■□□□□ 0.53
CLN5-218ENST00000637397 CRACR2AQ9BSW2 395 aa18.37■□□□□ 0.53
CLN5-218ENST00000637397 SYKP43405 635 aa18.37■□□□□ 0.53
CLN5-218ENST00000637397 CCDC148Q8NFR7 591 aa18.37■□□□□ 0.53
CLN5-218ENST00000637397 CENPHQ9H3R5 247 aa18.37■□□□□ 0.53
CLN5-218ENST00000637397 CCDC196A0A1B0GTZ2 297 aa18.37■□□□□ 0.53
CLN5-218ENST00000637397 MCMDC2Q4G0Z9 681 aa18.37■□□□□ 0.53
CLN5-218ENST00000637397 PPP1R9BQ96SB3 815 aa18.37■□□□□ 0.53
CLN5-218ENST00000637397 COPS6Q7L5N1 327 aa18.37■□□□□ 0.53
CLN5-218ENST00000637397 TCEAL9Q9UHQ7 104 aa18.37■□□□□ 0.53
CLN5-218ENST00000637397 SNX14Q9Y5W7 946 aa18.37■□□□□ 0.53
CLN5-218ENST00000637397 KRT18P05783 430 aaKnown RBP18.36■□□□□ 0.53
CLN5-218ENST00000637397 LMOD1P29536 600 aaPredicted RBP18.36■□□□□ 0.53
CLN5-218ENST00000637397 CT47A1Q5JQC4 288 aaPredicted RBP18.36■□□□□ 0.53
CLN5-218ENST00000637397 XAGE3Q8WTP9 111 aa18.36■□□□□ 0.53
CLN5-218ENST00000637397 BRD1O95696 1058 aa18.36■□□□□ 0.53
CLN5-218ENST00000637397 SSRP1Q08945 709 aaKnown RBP18.36■□□□□ 0.53
CLN5-218ENST00000637397 ZHX3Q9H4I2 956 aa18.36■□□□□ 0.53
CLN5-218ENST00000637397 NCOA7Q8NI08 942 aa18.36■□□□□ 0.53
CLN5-218ENST00000637397 KIAA0754O94854 1291 aa18.35■□□□□ 0.53
CLN5-218ENST00000637397 RDXP35241 583 aaKnown RBP18.35■□□□□ 0.53
CLN5-218ENST00000637397 LUC7LQ9NQ29 371 aaKnown RBP18.35■□□□□ 0.53
CLN5-218ENST00000637397 TTC21AQ8NDW8 1320 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms