RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 SRP68Q9UHB9 627 aaKnown RBP16.76■□□□□ 0.27
LINC00643-207ENST00000637212 NIP7Q9Y221 180 aaKnown RBP eCLIP16.76■□□□□ 0.27
LINC00643-207ENST00000637212 TNS1Q9HBL0 1735 aaKnown RBP16.76■□□□□ 0.27
LINC00643-207ENST00000637212 MYH14Q7Z406 1995 aaKnown RBP16.75■□□□□ 0.27
LINC00643-207ENST00000637212 RGPD3A6NKT7 1758 aaPredicted RBP16.75■□□□□ 0.27
LINC00643-207ENST00000637212 RGPD4Q7Z3J3 1758 aa16.75■□□□□ 0.27
LINC00643-207ENST00000637212 HSP90B1P14625 803 aaKnown RBP16.75■□□□□ 0.27
LINC00643-207ENST00000637212 GPTP24298 496 aa16.75■□□□□ 0.27
LINC00643-207ENST00000637212 SETDB2Q96T68 719 aa16.75■□□□□ 0.27
LINC00643-207ENST00000637212 UTP14AQ9BVJ6 771 aaKnown RBP16.75■□□□□ 0.27
LINC00643-207ENST00000637212 LRRFIP2Q9Y608 721 aaKnown RBP16.75■□□□□ 0.27
LINC00643-207ENST00000637212 HMMRO75330 724 aa16.74■□□□□ 0.27
LINC00643-207ENST00000637212 SUSD4Q5VX71 490 aa16.74■□□□□ 0.27
LINC00643-207ENST00000637212 B4GALNT3Q6L9W6 998 aa16.74■□□□□ 0.27
LINC00643-207ENST00000637212 CEP85Q6P2H3 762 aa16.74■□□□□ 0.27
LINC00643-207ENST00000637212 COL23A1Q86Y22 540 aaPredicted RBP16.74■□□□□ 0.27
LINC00643-207ENST00000637212 NLGN1Q8N2Q7 840 aa16.74■□□□□ 0.27
LINC00643-207ENST00000637212 C1orf115Q9H7X2 142 aa16.74■□□□□ 0.27
LINC00643-207ENST00000637212 TRMT112Q9UI30 125 aaKnown RBP16.74■□□□□ 0.27
LINC00643-207ENST00000637212 CDHR2Q9BYE9 1310 aa16.73■□□□□ 0.27
LINC00643-207ENST00000637212 GYS1P13807 737 aa16.73■□□□□ 0.27
LINC00643-207ENST00000637212 MTX1Q13505 466 aa16.73■□□□□ 0.27
LINC00643-207ENST00000637212 TBC1D9BQ66K14 1250 aa16.73■□□□□ 0.27
LINC00643-207ENST00000637212 CENPQQ7L2Z9 268 aaPredicted RBP16.73■□□□□ 0.27
LINC00643-207ENST00000637212 UBE3BQ7Z3V4 1068 aa16.73■□□□□ 0.27
LINC00643-207ENST00000637212 SIRT2Q8IXJ6 389 aa16.73■□□□□ 0.27
LINC00643-207ENST00000637212 PLA2G12BQ9BX93 195 aa16.73■□□□□ 0.27
LINC00643-207ENST00000637212 NYXQ9GZU5 481 aa16.73■□□□□ 0.27
LINC00643-207ENST00000637212 UBN2Q6ZU65 1347 aa16.72■□□□□ 0.27
LINC00643-207ENST00000637212 LRP5O75197 1615 aa16.72■□□□□ 0.27
LINC00643-207ENST00000637212 IGHDP01880 384 aa16.72■□□□□ 0.27
LINC00643-207ENST00000637212 TM4SF1P30408 202 aa16.72■□□□□ 0.27
LINC00643-207ENST00000637212 TPTE2Q6XPS3 522 aa16.72■□□□□ 0.27
LINC00643-207ENST00000637212 KAZALD1Q96I82 304 aa16.72■□□□□ 0.27
LINC00643-207ENST00000637212 SUCLG2Q96I99 432 aa16.72■□□□□ 0.27
LINC00643-207ENST00000637212 SRCAPQ6ZRS2 3230 aa16.72■□□□□ 0.27
LINC00643-207ENST00000637212 PNPLA7Q6ZV29 1317 aa16.71■□□□□ 0.27
LINC00643-207ENST00000637212 TAF1LQ8IZX4 1826 aa16.71■□□□□ 0.27
LINC00643-207ENST00000637212 RABL6Q3YEC7 729 aaPredicted RBP16.71■□□□□ 0.27
LINC00643-207ENST00000637212 SLC10A5Q5PT55 438 aa16.71■□□□□ 0.27
LINC00643-207ENST00000637212 FAM89AQ96GI7 184 aa16.71■□□□□ 0.27
LINC00643-207ENST00000637212 ANO8Q9HCE9 1232 aaPredicted RBP16.71■□□□□ 0.27
LINC00643-207ENST00000637212 SH3TC1Q8TE82 1336 aa16.7■□□□□ 0.26
LINC00643-207ENST00000637212 NTSR2O95665 410 aa16.7■□□□□ 0.26
LINC00643-207ENST00000637212 FOXO4P98177 505 aa16.7■□□□□ 0.26
LINC00643-207ENST00000637212 SSH3Q8TE77 659 aa16.7■□□□□ 0.26
LINC00643-207ENST00000637212 JARID2Q92833 1246 aaPredicted RBP16.7■□□□□ 0.26
LINC00643-207ENST00000637212 KDM2BQ8NHM5 1336 aa16.7■□□□□ 0.26
LINC00643-207ENST00000637212 IRS4O14654 1257 aaPredicted RBP16.69■□□□□ 0.26
LINC00643-207ENST00000637212 CSF1RP07333 972 aa16.69■□□□□ 0.26
LINC00643-207ENST00000637212 POLA2Q14181 598 aa16.69■□□□□ 0.26
LINC00643-207ENST00000637212 NFIXQ14938 502 aa16.69■□□□□ 0.26
LINC00643-207ENST00000637212 BICDL1Q6ZP65 573 aa16.69■□□□□ 0.26
LINC00643-207ENST00000637212 GCC1Q96CN9 775 aa16.69■□□□□ 0.26
LINC00643-207ENST00000637212 BICC1Q9H694 974 aaKnown RBP16.69■□□□□ 0.26
LINC00643-207ENST00000637212 DCTPP1Q9H773 170 aa16.69■□□□□ 0.26
LINC00643-207ENST00000637212 NUP188Q5SRE5 1749 aa16.68■□□□□ 0.26
LINC00643-207ENST00000637212 PDE8AO60658 829 aa16.68■□□□□ 0.26
LINC00643-207ENST00000637212 EPHA10Q5JZY3 1008 aa16.68■□□□□ 0.26
LINC00643-207ENST00000637212 NBPF5PQ86XG9 351 aaPredicted RBP16.68■□□□□ 0.26
LINC00643-207ENST00000637212 SLC16A10Q8TF71 515 aa16.68■□□□□ 0.26
LINC00643-207ENST00000637212 ARFGEF2Q9Y6D5 1785 aa16.68■□□□□ 0.26
LINC00643-207ENST00000637212 PNMA6EA0A0J9YXQ4 647 aa16.67■□□□□ 0.26
LINC00643-207ENST00000637212 SRGAP3O43295 1099 aa16.67■□□□□ 0.26
LINC00643-207ENST00000637212 GTF2E1P29083 439 aaPredicted RBP16.67■□□□□ 0.26
LINC00643-207ENST00000637212 RTL5Q5HYW3 569 aaPredicted RBP16.67■□□□□ 0.26
LINC00643-207ENST00000637212 SMC5Q8IY18 1101 aa16.67■□□□□ 0.26
LINC00643-207ENST00000637212 LMBR1LQ6UX01 489 aa16.66■□□□□ 0.26
LINC00643-207ENST00000637212 CARMIL3Q8ND23 1372 aa16.65■□□□□ 0.26
LINC00643-207ENST00000637212 N4BP2Q86UW6 1770 aaPredicted RBP16.65■□□□□ 0.26
LINC00643-207ENST00000637212 FAM177BA6PVY3 158 aa16.65■□□□□ 0.26
LINC00643-207ENST00000637212 HSP90AB4PQ58FF6 505 aa16.65■□□□□ 0.26
LINC00643-207ENST00000637212 SYNE4Q8N205 404 aa16.65■□□□□ 0.26
LINC00643-207ENST00000637212 NOP58Q9Y2X3 529 aaKnown RBP16.65■□□□□ 0.26
LINC00643-207ENST00000637212 SERPINB2P05120 415 aa16.64■□□□□ 0.25
LINC00643-207ENST00000637212 CTSWP56202 376 aa16.64■□□□□ 0.25
LINC00643-207ENST00000637212 ERFEQ4G0M1 354 aa16.64■□□□□ 0.25
LINC00643-207ENST00000637212 TTLL11Q8NHH1 800 aa16.64■□□□□ 0.25
LINC00643-207ENST00000637212 UBR3Q6ZT12 1888 aa16.63■□□□□ 0.25
LINC00643-207ENST00000637212 POLRMTO00411 1230 aaKnown RBP16.63■□□□□ 0.25
LINC00643-207ENST00000637212 RAB11FIP3O75154 756 aa16.63■□□□□ 0.25
LINC00643-207ENST00000637212 HCLS1P14317 486 aaPredicted RBP16.63■□□□□ 0.25
LINC00643-207ENST00000637212 SF3B3Q15393 1217 aaKnown RBP16.63■□□□□ 0.25
LINC00643-207ENST00000637212 NUTM1Q86Y26 1132 aa16.63■□□□□ 0.25
LINC00643-207ENST00000637212 COPRSQ9NQ92 184 aa16.63■□□□□ 0.25
LINC00643-207ENST00000637212 RFX5P48382 616 aaPredicted RBP16.62■□□□□ 0.25
LINC00643-207ENST00000637212 CCDC57Q2TAC2 916 aa16.62■□□□□ 0.25
LINC00643-207ENST00000637212 CNBD1Q8NA66 436 aa16.62■□□□□ 0.25
LINC00643-207ENST00000637212 NLRP3Q96P20 1036 aa16.62■□□□□ 0.25
LINC00643-207ENST00000637212 PARP3Q9Y6F1 533 aa16.62■□□□□ 0.25
LINC00643-207ENST00000637212 NPHP1O15259 732 aa16.61■□□□□ 0.25
LINC00643-207ENST00000637212 SURF6O75683 361 aaKnown RBP16.61■□□□□ 0.25
LINC00643-207ENST00000637212 NUCB1Q02818 461 aa16.61■□□□□ 0.25
LINC00643-207ENST00000637212 DDR1Q08345 913 aa16.61■□□□□ 0.25
LINC00643-207ENST00000637212 IFIT5Q13325 482 aaKnown RBP16.61■□□□□ 0.25
LINC00643-207ENST00000637212 CCDC152Q4G0S7 254 aa16.61■□□□□ 0.25
LINC00643-207ENST00000637212 FBXO3Q9UK99 471 aa16.61■□□□□ 0.25
LINC00643-207ENST00000637212 NUP98P52948 1817 aa16.61■□□□□ 0.25
LINC00643-207ENST00000637212 SCN7AQ01118 1682 aa16.6■□□□□ 0.25
LINC00643-207ENST00000637212 BCORQ6W2J9 1755 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms