RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 ZBTB38Q8NAP3 1195 aaPredicted RBP26.22■■□□□ 1.79
CLN8-213ENST00000637156 FAM89AQ96GI7 184 aa26.22■■□□□ 1.79
CLN8-213ENST00000637156 ARHGEF1Q92888 912 aaKnown RBP26.21■■□□□ 1.79
CLN8-213ENST00000637156 UBN2Q6ZU65 1347 aa26.21■■□□□ 1.79
CLN8-213ENST00000637156 PCCAP05165 728 aaPredicted RBP26.21■■□□□ 1.79
CLN8-213ENST00000637156 FOXO4P98177 505 aa26.21■■□□□ 1.79
CLN8-213ENST00000637156 RABL6Q3YEC7 729 aaPredicted RBP26.21■■□□□ 1.79
CLN8-213ENST00000637156 CLEC4GQ6UXB4 293 aa26.21■■□□□ 1.79
CLN8-213ENST00000637156 AFDNP55196 1824 aaKnown RBP26.2■■□□□ 1.79
CLN8-213ENST00000637156 SYNE4Q8N205 404 aa26.2■■□□□ 1.78
CLN8-213ENST00000637156 NARFQ9UHQ1 456 aa26.2■■□□□ 1.78
CLN8-213ENST00000637156 APBB1O00213 710 aa26.19■■□□□ 1.78
CLN8-213ENST00000637156 AK7Q96M32 723 aa26.19■■□□□ 1.78
CLN8-213ENST00000637156 SURF6O75683 361 aaKnown RBP26.19■■□□□ 1.78
CLN8-213ENST00000637156 TRAPPC3LQ5T215 181 aa26.19■■□□□ 1.78
CLN8-213ENST00000637156 BCL2L12Q9HB09 334 aa26.19■■□□□ 1.78
CLN8-213ENST00000637156 TAF1LQ8IZX4 1826 aa26.19■■□□□ 1.78
CLN8-213ENST00000637156 SUSD4Q5VX71 490 aa26.18■■□□□ 1.78
CLN8-213ENST00000637156 NUP98P52948 1817 aa26.18■■□□□ 1.78
CLN8-213ENST00000637156 C4BP0C0L5 1744 aa26.18■■□□□ 1.78
CLN8-213ENST00000637156 USPL1Q5W0Q7 1092 aa26.17■■□□□ 1.78
CLN8-213ENST00000637156 SRP68Q9UHB9 627 aaKnown RBP26.17■■□□□ 1.78
CLN8-213ENST00000637156 TRMT112Q9UI30 125 aaKnown RBP26.17■■□□□ 1.78
CLN8-213ENST00000637156 NOP58Q9Y2X3 529 aaKnown RBP26.17■■□□□ 1.78
CLN8-213ENST00000637156 SMARCA5O60264 1052 aaPredicted RBP26.17■■□□□ 1.78
CLN8-213ENST00000637156 LMBR1LQ6UX01 489 aa26.17■■□□□ 1.78
CLN8-213ENST00000637156 NIP7Q9Y221 180 aaKnown RBP eCLIP26.17■■□□□ 1.78
CLN8-213ENST00000637156 ZNF652Q9Y2D9 606 aa26.17■■□□□ 1.78
CLN8-213ENST00000637156 PHF14O94880 888 aa26.16■■□□□ 1.78
CLN8-213ENST00000637156 PA2G4Q9UQ80 394 aaKnown RBP26.16■■□□□ 1.78
CLN8-213ENST00000637156 RGL2O15211 777 aa26.15■■□□□ 1.78
CLN8-213ENST00000637156 C16orf71Q8IYS4 520 aaPredicted RBP26.15■■□□□ 1.78
CLN8-213ENST00000637156 ZPR1O75312 459 aa26.15■■□□□ 1.78
CLN8-213ENST00000637156 RFX5P48382 616 aaPredicted RBP26.14■■□□□ 1.78
CLN8-213ENST00000637156 PLA2G12BQ9BX93 195 aa26.14■■□□□ 1.78
CLN8-213ENST00000637156 CDHR2Q9BYE9 1310 aa26.13■■□□□ 1.77
CLN8-213ENST00000637156 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.13■■□□□ 1.77
CLN8-213ENST00000637156 RFC4P35249 363 aa26.13■■□□□ 1.77
CLN8-213ENST00000637156 PARP10Q53GL7 1025 aa26.13■■□□□ 1.77
CLN8-213ENST00000637156 HMGB2P26583 209 aaKnown RBP26.13■■□□□ 1.77
CLN8-213ENST00000637156 KLHDC4Q8TBB5 520 aa26.13■■□□□ 1.77
CLN8-213ENST00000637156 LRRCC1Q9C099 1032 aa26.13■■□□□ 1.77
CLN8-213ENST00000637156 BCL11AQ9H165 835 aa26.13■■□□□ 1.77
CLN8-213ENST00000637156 FAM177BA6PVY3 158 aa26.12■■□□□ 1.77
CLN8-213ENST00000637156 RAB11FIP3O75154 756 aa26.12■■□□□ 1.77
CLN8-213ENST00000637156 ADRA2BP18089 450 aa26.12■■□□□ 1.77
CLN8-213ENST00000637156 TBC1D9BQ66K14 1250 aa26.12■■□□□ 1.77
CLN8-213ENST00000637156 UTP14AQ9BVJ6 771 aaKnown RBP26.12■■□□□ 1.77
CLN8-213ENST00000637156 IRS4O14654 1257 aaPredicted RBP26.11■■□□□ 1.77
CLN8-213ENST00000637156 CSF1RP07333 972 aa26.11■■□□□ 1.77
CLN8-213ENST00000637156 PTPN12Q05209 780 aaKnown RBP26.11■■□□□ 1.77
CLN8-213ENST00000637156 ZBTB47Q9UFB7 747 aaPredicted RBP26.11■■□□□ 1.77
CLN8-213ENST00000637156 USP42Q9H9J4 1324 aaKnown RBP26.1■■□□□ 1.77
CLN8-213ENST00000637156 COPRSQ9NQ92 184 aa26.1■■□□□ 1.77
CLN8-213ENST00000637156 HSP90AB4PQ58FF6 505 aa26.09■■□□□ 1.77
CLN8-213ENST00000637156 BICDL1Q6ZP65 573 aa26.09■■□□□ 1.77
CLN8-213ENST00000637156 RHPN1Q8TCX5 695 aa26.09■■□□□ 1.77
CLN8-213ENST00000637156 ANKRD36CQ5JPF3 1778 aa26.09■■□□□ 1.77
CLN8-213ENST00000637156 NTSR2O95665 410 aa26.08■■□□□ 1.77
CLN8-213ENST00000637156 SSFA2P28290 1259 aa26.08■■□□□ 1.77
CLN8-213ENST00000637156 OTUD7AQ8TE49 926 aaPredicted RBP26.08■■□□□ 1.77
CLN8-213ENST00000637156 AKT1S1Q96B36 256 aa26.08■■□□□ 1.77
CLN8-213ENST00000637156 CHMP3Q9Y3E7 222 aa26.08■■□□□ 1.77
CLN8-213ENST00000637156 SH3TC1Q8TE82 1336 aa26.08■■□□□ 1.77
CLN8-213ENST00000637156 ZNF827Q17R98 1081 aa26.08■■□□□ 1.77
CLN8-213ENST00000637156 PLEKHM2Q8IWE5 1019 aa26.08■■□□□ 1.77
CLN8-213ENST00000637156 CAMKK2Q96RR4 588 aa26.08■■□□□ 1.77
CLN8-213ENST00000637156 EN1Q05925 392 aaPredicted RBP26.07■■□□□ 1.76
CLN8-213ENST00000637156 TTLL11Q8NHH1 800 aa26.07■■□□□ 1.76
CLN8-213ENST00000637156 KIF1BPQ96EK5 621 aa26.07■■□□□ 1.76
CLN8-213ENST00000637156 SIL1Q9H173 461 aa26.06■■□□□ 1.76
CLN8-213ENST00000637156 IL1RAPL2Q9NP60 686 aa26.06■■□□□ 1.76
CLN8-213ENST00000637156 PDE8AO60658 829 aa26.06■■□□□ 1.76
CLN8-213ENST00000637156 G3BP1Q13283 466 aaKnown RBP eCLIP26.06■■□□□ 1.76
CLN8-213ENST00000637156 EZH2Q15910 746 aaKnown RBP26.06■■□□□ 1.76
CLN8-213ENST00000637156 NUTM1Q86Y26 1132 aa26.06■■□□□ 1.76
CLN8-213ENST00000637156 SETDB2Q96T68 719 aa26.06■■□□□ 1.76
CLN8-213ENST00000637156 BCORQ6W2J9 1755 aa26.05■■□□□ 1.76
CLN8-213ENST00000637156 SASH1O94885 1247 aa26.05■■□□□ 1.76
CLN8-213ENST00000637156 HCLS1P14317 486 aaPredicted RBP26.05■■□□□ 1.76
CLN8-213ENST00000637156 OS9Q13438 667 aaPredicted RBP26.05■■□□□ 1.76
CLN8-213ENST00000637156 CCDC85AQ96PX6 553 aaPredicted RBP26.05■■□□□ 1.76
CLN8-213ENST00000637156 TFCP2L1Q9NZI6 479 aa26.05■■□□□ 1.76
CLN8-213ENST00000637156 TNS1Q9HBL0 1735 aaKnown RBP26.05■■□□□ 1.76
CLN8-213ENST00000637156 TSHZ2Q9NRE2 1034 aa26.04■■□□□ 1.76
CLN8-213ENST00000637156 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.04■■□□□ 1.76
CLN8-213ENST00000637156 CTSWP56202 376 aa26.03■■□□□ 1.76
CLN8-213ENST00000637156 UBR3Q6ZT12 1888 aa26.02■■□□□ 1.76
CLN8-213ENST00000637156 GYS1P13807 737 aa26.02■■□□□ 1.76
CLN8-213ENST00000637156 FAM161AQ3B820 660 aa26.02■■□□□ 1.76
CLN8-213ENST00000637156 ZNF594Q96JF6 807 aaPredicted RBP26.02■■□□□ 1.76
CLN8-213ENST00000637156 CCDC57Q2TAC2 916 aa26.02■■□□□ 1.76
CLN8-213ENST00000637156 ERC1Q8IUD2 1116 aa26.02■■□□□ 1.76
CLN8-213ENST00000637156 GREM2Q9H772 168 aa26.02■■□□□ 1.76
CLN8-213ENST00000637156 SCN7AQ01118 1682 aa26.01■■□□□ 1.75
CLN8-213ENST00000637156 ERFEQ4G0M1 354 aa26.01■■□□□ 1.75
CLN8-213ENST00000637156 SALL3Q9BXA9 1300 aa26■■□□□ 1.75
CLN8-213ENST00000637156 NFIXQ14938 502 aa26■■□□□ 1.75
CLN8-213ENST00000637156 IFIT5Q13325 482 aaKnown RBP26■■□□□ 1.75
CLN8-213ENST00000637156 COL23A1Q86Y22 540 aaPredicted RBP26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms