RNA–Protein interactions for RNA: ENST00000636957.1

CHRNA7-222, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 5

Gene CHRNA7, Length 622 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-222	ENST00000636957	RIC3	Q7Z5B4	369 aa		11.53	□□□□□ -0.56
CHRNA7-222	ENST00000636957	BCL2L13	Q9BXK5	485 aa		11.53	□□□□□ -0.56
CHRNA7-222	ENST00000636957	NIP7	Q9Y221	180 aa	Known RBP eCLIP	11.53	□□□□□ -0.56
CHRNA7-222	ENST00000636957	PTPRC	P08575	1304 aa		11.53	□□□□□ -0.56
CHRNA7-222	ENST00000636957	GOLGB1	Q14789	3259 aa	Known RBP	11.53	□□□□□ -0.56
CHRNA7-222	ENST00000636957	IBTK	Q9P2D0	1353 aa	Predicted RBP	11.53	□□□□□ -0.56
CHRNA7-222	ENST00000636957	C10orf71	Q711Q0	1435 aa		11.52	□□□□□ -0.56
CHRNA7-222	ENST00000636957	COL11A2	P13942	1736 aa	Predicted RBP	11.52	□□□□□ -0.56
CHRNA7-222	ENST00000636957	PXDNL	A1KZ92	1463 aa		11.52	□□□□□ -0.56
CHRNA7-222	ENST00000636957	PI4KAP2	A4QPH2	592 aa		11.52	□□□□□ -0.57
CHRNA7-222	ENST00000636957	TCIRG1	Q13488	830 aa		11.52	□□□□□ -0.57
CHRNA7-222	ENST00000636957	BICDL1	Q6ZP65	573 aa		11.52	□□□□□ -0.57
CHRNA7-222	ENST00000636957	ZNF34	Q8IZ26	560 aa		11.52	□□□□□ -0.57
CHRNA7-222	ENST00000636957	PI4KAP1	Q8N8J0	262 aa		11.52	□□□□□ -0.57
CHRNA7-222	ENST00000636957	MAP3K2	Q9Y2U5	619 aa		11.52	□□□□□ -0.57
CHRNA7-222	ENST00000636957	KIF16B	Q96L93	1317 aa		11.52	□□□□□ -0.57
CHRNA7-222	ENST00000636957	GPT	P24298	496 aa		11.51	□□□□□ -0.57
CHRNA7-222	ENST00000636957	PARP10	Q53GL7	1025 aa		11.51	□□□□□ -0.57
CHRNA7-222	ENST00000636957	METTL22	Q9BUU2	404 aa	Predicted RBP	11.51	□□□□□ -0.57
CHRNA7-222	ENST00000636957	PPP1R1B	Q9UD71	204 aa	Predicted RBP	11.51	□□□□□ -0.57
CHRNA7-222	ENST00000636957	TNRC6C	Q9HCJ0	1690 aa	Known RBP	11.51	□□□□□ -0.57
CHRNA7-222	ENST00000636957	UBN2	Q6ZU65	1347 aa		11.51	□□□□□ -0.57
CHRNA7-222	ENST00000636957	SERPINB2	P05120	415 aa		11.5	□□□□□ -0.57
CHRNA7-222	ENST00000636957	NEXN	Q0ZGT2	675 aa		11.5	□□□□□ -0.57
CHRNA7-222	ENST00000636957	TRIM28	Q13263	835 aa	Known RBP	11.5	□□□□□ -0.57
CHRNA7-222	ENST00000636957	NBPF5P	Q86XG9	351 aa	Predicted RBP	11.5	□□□□□ -0.57
CHRNA7-222	ENST00000636957	DNAAF4	Q8WXU2	420 aa		11.5	□□□□□ -0.57
CHRNA7-222	ENST00000636957	ISCA1	Q9BUE6	129 aa		11.5	□□□□□ -0.57
CHRNA7-222	ENST00000636957	NYX	Q9GZU5	481 aa		11.5	□□□□□ -0.57
CHRNA7-222	ENST00000636957	RNF123	Q5XPI4	1314 aa		11.5	□□□□□ -0.57
CHRNA7-222	ENST00000636957	ARFGEF1	Q9Y6D6	1849 aa		11.49	□□□□□ -0.57
CHRNA7-222	ENST00000636957	TPTE2	Q6XPS3	522 aa		11.49	□□□□□ -0.57
CHRNA7-222	ENST00000636957	PPP1R42	Q7Z4L9	355 aa		11.49	□□□□□ -0.57
CHRNA7-222	ENST00000636957	NLRP10	Q86W26	655 aa		11.49	□□□□□ -0.57
CHRNA7-222	ENST00000636957	CNBD1	Q8NA66	436 aa		11.49	□□□□□ -0.57
CHRNA7-222	ENST00000636957	MYD88	Q99836	296 aa		11.49	□□□□□ -0.57
CHRNA7-222	ENST00000636957	SSUH2	Q9Y2M2	353 aa		11.49	□□□□□ -0.57
CHRNA7-222	ENST00000636957	RIC1	Q4ADV7	1423 aa		11.49	□□□□□ -0.57
CHRNA7-222	ENST00000636957		F6X3S4	739 aa		11.48	□□□□□ -0.57
CHRNA7-222	ENST00000636957	ATP5J2-PTCD1	G3V325	749 aa		11.48	□□□□□ -0.57
CHRNA7-222	ENST00000636957	NPHP1	O15259	732 aa		11.48	□□□□□ -0.57
CHRNA7-222	ENST00000636957	BCAR3	O75815	825 aa		11.48	□□□□□ -0.57
CHRNA7-222	ENST00000636957	GABBR2	O75899	941 aa		11.48	□□□□□ -0.57
CHRNA7-222	ENST00000636957	NTSR2	O95665	410 aa		11.48	□□□□□ -0.57
CHRNA7-222	ENST00000636957	ST5	P78524	1137 aa		11.48	□□□□□ -0.57
CHRNA7-222	ENST00000636957	PRR5L	Q6MZQ0	368 aa		11.48	□□□□□ -0.57
CHRNA7-222	ENST00000636957	CCDC191	Q8NCU4	936 aa		11.48	□□□□□ -0.57
CHRNA7-222	ENST00000636957	LINS1	Q8NG48	757 aa		11.48	□□□□□ -0.57
CHRNA7-222	ENST00000636957	ARHGAP45	Q92619	1136 aa		11.48	□□□□□ -0.57
CHRNA7-222	ENST00000636957	CD2AP	Q9Y5K6	639 aa		11.48	□□□□□ -0.57
CHRNA7-222	ENST00000636957	FAM177B	A6PVY3	158 aa		11.47	□□□□□ -0.57
CHRNA7-222	ENST00000636957	IPO8	O15397	1037 aa	Known RBP	11.47	□□□□□ -0.57
CHRNA7-222	ENST00000636957	IGKV5-2	P06315	115 aa		11.47	□□□□□ -0.57
CHRNA7-222	ENST00000636957	SUSD4	Q5VX71	490 aa		11.47	□□□□□ -0.57
CHRNA7-222	ENST00000636957	UTP14A	Q9BVJ6	771 aa	Known RBP	11.47	□□□□□ -0.57
CHRNA7-222	ENST00000636957	API5	Q9BZZ5	524 aa	Known RBP	11.47	□□□□□ -0.57
CHRNA7-222	ENST00000636957	FHDC1	Q9C0D6	1143 aa	Predicted RBP	11.47	□□□□□ -0.57
CHRNA7-222	ENST00000636957	CWC25	Q9NXE8	425 aa	Predicted RBP	11.47	□□□□□ -0.57
CHRNA7-222	ENST00000636957	RCAN3	Q9UKA8	241 aa		11.47	□□□□□ -0.57
CHRNA7-222	ENST00000636957	NOB1	Q9ULX3	412 aa	Known RBP	11.47	□□□□□ -0.57
CHRNA7-222	ENST00000636957	TAF1	P21675	1872 aa		11.46	□□□□□ -0.57
CHRNA7-222	ENST00000636957	ABCC12	Q96J65	1359 aa		11.46	□□□□□ -0.57
CHRNA7-222	ENST00000636957	SH3TC1	Q8TE82	1336 aa		11.46	□□□□□ -0.57
CHRNA7-222	ENST00000636957	NEURL1B	A8MQ27	555 aa		11.46	□□□□□ -0.57
CHRNA7-222	ENST00000636957	GTF2E1	P29083	439 aa	Predicted RBP	11.46	□□□□□ -0.57
CHRNA7-222	ENST00000636957	LHX8	Q68G74	356 aa		11.46	□□□□□ -0.57
CHRNA7-222	ENST00000636957	CHADL	Q6NUI6	762 aa		11.46	□□□□□ -0.57
CHRNA7-222	ENST00000636957	SLC4A10	Q6U841	1118 aa		11.46	□□□□□ -0.57
CHRNA7-222	ENST00000636957	KLHL34	Q8N239	644 aa		11.46	□□□□□ -0.57
CHRNA7-222	ENST00000636957	TRMT112	Q9UI30	125 aa	Known RBP	11.46	□□□□□ -0.57
CHRNA7-222	ENST00000636957	SPEF2	Q9C093	1822 aa		11.45	□□□□□ -0.58
CHRNA7-222	ENST00000636957	PRR29	P0C7W0	189 aa		11.45	□□□□□ -0.58
CHRNA7-222	ENST00000636957	MKRN4P	Q13434	485 aa	Predicted RBP	11.45	□□□□□ -0.58
CHRNA7-222	ENST00000636957	CWF19L2	Q2TBE0	894 aa	Known RBP	11.45	□□□□□ -0.58
CHRNA7-222	ENST00000636957	BEND3	Q5T5X7	828 aa		11.45	□□□□□ -0.58
CHRNA7-222	ENST00000636957	ATF7IP	Q6VMQ6	1270 aa		11.45	□□□□□ -0.58
CHRNA7-222	ENST00000636957	NUTM1	Q86Y26	1132 aa		11.45	□□□□□ -0.58
CHRNA7-222	ENST00000636957	FRAT1	Q92837	279 aa	Predicted RBP	11.45	□□□□□ -0.58
CHRNA7-222	ENST00000636957	SYT17	Q9BSW7	474 aa		11.45	□□□□□ -0.58
CHRNA7-222	ENST00000636957	BRIP1	Q9BX63	1249 aa		11.45	□□□□□ -0.58
CHRNA7-222	ENST00000636957	SRCIN1	Q9C0H9	1055 aa		11.45	□□□□□ -0.58
CHRNA7-222	ENST00000636957	UTRN	P46939	3433 aa		11.44	□□□□□ -0.58
CHRNA7-222	ENST00000636957	ABCC4	O15439	1325 aa		11.44	□□□□□ -0.58
CHRNA7-222	ENST00000636957	ALDH1L1	O75891	902 aa		11.44	□□□□□ -0.58
CHRNA7-222	ENST00000636957	PCCA	P05165	728 aa	Predicted RBP	11.44	□□□□□ -0.58
CHRNA7-222	ENST00000636957	TRIM27	P14373	513 aa		11.44	□□□□□ -0.58
CHRNA7-222	ENST00000636957	PDE6B	P35913	854 aa		11.44	□□□□□ -0.58
CHRNA7-222	ENST00000636957	TGFB2	P61812	414 aa		11.44	□□□□□ -0.58
CHRNA7-222	ENST00000636957	GCKR	Q14397	625 aa		11.44	□□□□□ -0.58
CHRNA7-222	ENST00000636957	ERFE	Q4G0M1	354 aa		11.44	□□□□□ -0.58
CHRNA7-222	ENST00000636957	ZKSCAN2	Q63HK3	967 aa		11.44	□□□□□ -0.58
CHRNA7-222	ENST00000636957	CCDC24	Q8N4L8	307 aa		11.44	□□□□□ -0.58
CHRNA7-222	ENST00000636957	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.44	□□□□□ -0.58
CHRNA7-222	ENST00000636957	PDZRN3	Q9UPQ7	1066 aa		11.44	□□□□□ -0.58
CHRNA7-222	ENST00000636957	SLX4	Q8IY92	1834 aa		11.44	□□□□□ -0.58
CHRNA7-222	ENST00000636957	CDHR2	Q9BYE9	1310 aa		11.43	□□□□□ -0.58
CHRNA7-222	ENST00000636957	HSP90B1	P14625	803 aa	Known RBP	11.43	□□□□□ -0.58
CHRNA7-222	ENST00000636957	CCT4	P50991	539 aa	Known RBP	11.43	□□□□□ -0.58
CHRNA7-222	ENST00000636957	SLC10A5	Q5PT55	438 aa		11.43	□□□□□ -0.58
CHRNA7-222	ENST00000636957	NLGN2	Q8NFZ4	835 aa		11.43	□□□□□ -0.58

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