RNA–Protein interactions for RNA: ENST00000636903.1

SMARCA2-254, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-254ENST00000636903 SASH1O94885 1247 aa16.85■□□□□ 0.29
SMARCA2-254ENST00000636903 MX1P20591 662 aa16.85■□□□□ 0.29
SMARCA2-254ENST00000636903 FOXO4P98177 505 aa16.84■□□□□ 0.29
SMARCA2-254ENST00000636903 AMIGO3Q86WK7 504 aa16.84■□□□□ 0.29
SMARCA2-254ENST00000636903 SALL3Q9BXA9 1300 aa16.84■□□□□ 0.29
SMARCA2-254ENST00000636903 GIGYF2Q6Y7W6 1299 aaKnown RBP16.84■□□□□ 0.29
SMARCA2-254ENST00000636903 ISCA1Q9BUE6 129 aa16.84■□□□□ 0.29
SMARCA2-254ENST00000636903 EIF5P55010 431 aaKnown RBP16.83■□□□□ 0.28
SMARCA2-254ENST00000636903 TLR7Q9NYK1 1049 aaKnown RBP16.83■□□□□ 0.28
SMARCA2-254ENST00000636903 CCDC191Q8NCU4 936 aa16.82■□□□□ 0.28
SMARCA2-254ENST00000636903 KIF1BPQ96EK5 621 aa16.82■□□□□ 0.28
SMARCA2-254ENST00000636903 IPO9Q96P70 1041 aaKnown RBP16.82■□□□□ 0.28
SMARCA2-254ENST00000636903 CCDC8Q9H0W5 538 aaPredicted RBP16.82■□□□□ 0.28
SMARCA2-254ENST00000636903 ATRNO75882 1429 aa16.82■□□□□ 0.28
SMARCA2-254ENST00000636903 RFX5P48382 616 aaPredicted RBP16.82■□□□□ 0.28
SMARCA2-254ENST00000636903 PTPN12Q05209 780 aaKnown RBP16.82■□□□□ 0.28
SMARCA2-254ENST00000636903 UBN2Q6ZU65 1347 aa16.82■□□□□ 0.28
SMARCA2-254ENST00000636903 THSD7AQ9UPZ6 1657 aa16.82■□□□□ 0.28
SMARCA2-254ENST00000636903 IL6STP40189 918 aaPredicted RBP16.81■□□□□ 0.28
SMARCA2-254ENST00000636903 RILPL2Q969X0 211 aa16.81■□□□□ 0.28
SMARCA2-254ENST00000636903 NLRP10Q86W26 655 aa16.81■□□□□ 0.28
SMARCA2-254ENST00000636903 TRIM6-TRIM34B2RNG4 842 aa16.8■□□□□ 0.28
SMARCA2-254ENST00000636903 G3BP1Q13283 466 aaKnown RBP eCLIP16.8■□□□□ 0.28
SMARCA2-254ENST00000636903 EAF2Q96CJ1 260 aaPredicted RBP16.8■□□□□ 0.28
SMARCA2-254ENST00000636903 AACSQ86V21 672 aa16.8■□□□□ 0.28
SMARCA2-254ENST00000636903 RAB11FIP3O75154 756 aa16.79■□□□□ 0.28
SMARCA2-254ENST00000636903 RABL6Q3YEC7 729 aaPredicted RBP16.79■□□□□ 0.28
SMARCA2-254ENST00000636903 ONECUT3O60422 494 aaPredicted RBP16.79■□□□□ 0.28
SMARCA2-254ENST00000636903 SMARCC1Q92922 1105 aaPredicted RBP16.79■□□□□ 0.28
SMARCA2-254ENST00000636903 PUS3Q9BZE2 481 aaKnown RBP16.79■□□□□ 0.28
SMARCA2-254ENST00000636903 TRMT112Q9UI30 125 aaKnown RBP16.79■□□□□ 0.28
SMARCA2-254ENST00000636903 TFCP2Q12800 502 aa16.78■□□□□ 0.28
SMARCA2-254ENST00000636903 NBR1Q14596 966 aa16.78■□□□□ 0.28
SMARCA2-254ENST00000636903 LRRC24Q50LG9 513 aa16.78■□□□□ 0.28
SMARCA2-254ENST00000636903 NDUFB9Q9Y6M9 179 aa16.78■□□□□ 0.28
SMARCA2-254ENST00000636903 BTAF1O14981 1849 aa16.78■□□□□ 0.28
SMARCA2-254ENST00000636903 TRIM37O94972 964 aa16.78■□□□□ 0.28
SMARCA2-254ENST00000636903 BICDL1Q6ZP65 573 aa16.78■□□□□ 0.28
SMARCA2-254ENST00000636903 CCNL1Q9UK58 526 aaPredicted RBP16.78■□□□□ 0.28
SMARCA2-254ENST00000636903 NUP98P52948 1817 aa16.78■□□□□ 0.28
SMARCA2-254ENST00000636903 CDC45O75419 566 aa16.77■□□□□ 0.28
SMARCA2-254ENST00000636903 CAMTA2O94983 1202 aa16.77■□□□□ 0.28
SMARCA2-254ENST00000636903 CLASRPQ8N2M8 674 aaKnown RBP16.77■□□□□ 0.28
SMARCA2-254ENST00000636903 TBC1D32Q96NH3 1257 aa16.77■□□□□ 0.28
SMARCA2-254ENST00000636903 HDAC5Q9UQL6 1122 aa16.77■□□□□ 0.28
SMARCA2-254ENST00000636903 HCLS1P14317 486 aaPredicted RBP16.77■□□□□ 0.27
SMARCA2-254ENST00000636903 SUSD4Q5VX71 490 aa16.77■□□□□ 0.27
SMARCA2-254ENST00000636903 PI4K2BQ8TCG2 481 aa16.77■□□□□ 0.27
SMARCA2-254ENST00000636903 C22orf23Q9BZE7 217 aa16.77■□□□□ 0.27
SMARCA2-254ENST00000636903 OSBPL3Q9H4L5 887 aa16.77■□□□□ 0.27
SMARCA2-254ENST00000636903 SRP68Q9UHB9 627 aaKnown RBP16.77■□□□□ 0.27
SMARCA2-254ENST00000636903 PHF14O94880 888 aa16.76■□□□□ 0.27
SMARCA2-254ENST00000636903 ZBTB38Q8NAP3 1195 aaPredicted RBP16.76■□□□□ 0.27
SMARCA2-254ENST00000636903 UPF2Q9HAU5 1272 aaKnown RBP16.76■□□□□ 0.27
SMARCA2-254ENST00000636903 LRRC4BQ9NT99 713 aa16.76■□□□□ 0.27
SMARCA2-254ENST00000636903 IFIT2P09913 472 aaKnown RBP16.76■□□□□ 0.27
SMARCA2-254ENST00000636903 HSP90AB4PQ58FF6 505 aa16.76■□□□□ 0.27
SMARCA2-254ENST00000636903 CCDC24Q8N4L8 307 aa16.76■□□□□ 0.27
SMARCA2-254ENST00000636903 IL25Q9H293 177 aa16.76■□□□□ 0.27
SMARCA2-254ENST00000636903 COL15A1P39059 1388 aa16.76■□□□□ 0.27
SMARCA2-254ENST00000636903 GNPATO15228 680 aa16.75■□□□□ 0.27
SMARCA2-254ENST00000636903 COPRSQ9NQ92 184 aa16.75■□□□□ 0.27
SMARCA2-254ENST00000636903 PCCAP05165 728 aaPredicted RBP16.75■□□□□ 0.27
SMARCA2-254ENST00000636903 KRT27Q7Z3Y8 459 aa16.75■□□□□ 0.27
SMARCA2-254ENST00000636903 STAP2Q9UGK3 403 aa16.75■□□□□ 0.27
SMARCA2-254ENST00000636903 NIP7Q9Y221 180 aaKnown RBP eCLIP16.75■□□□□ 0.27
SMARCA2-254ENST00000636903 IRS4O14654 1257 aaPredicted RBP16.74■□□□□ 0.27
SMARCA2-254ENST00000636903 TRIM28Q13263 835 aaKnown RBP16.74■□□□□ 0.27
SMARCA2-254ENST00000636903 ZNF34Q8IZ26 560 aa16.74■□□□□ 0.27
SMARCA2-254ENST00000636903 GREM2Q9H772 168 aa16.74■□□□□ 0.27
SMARCA2-254ENST00000636903 ATG9AQ7Z3C6 839 aa16.74■□□□□ 0.27
SMARCA2-254ENST00000636903 EDC3Q96F86 508 aaKnown RBP16.74■□□□□ 0.27
SMARCA2-254ENST00000636903 BRWD3Q6RI45 1802 aa16.74■□□□□ 0.27
SMARCA2-254ENST00000636903 TIMM10P62072 90 aa16.73■□□□□ 0.27
SMARCA2-254ENST00000636903 ERVV-1B6SEH8 477 aa16.73■□□□□ 0.27
SMARCA2-254ENST00000636903 DDRGK1Q96HY6 314 aa16.73■□□□□ 0.27
SMARCA2-254ENST00000636903 BOLA2Q9H3K6 86 aa16.72■□□□□ 0.27
SMARCA2-254ENST00000636903 SBF2Q86WG5 1849 aa16.72■□□□□ 0.27
SMARCA2-254ENST00000636903 USPL1Q5W0Q7 1092 aa16.72■□□□□ 0.27
SMARCA2-254ENST00000636903 ERC1Q8IUD2 1116 aa16.72■□□□□ 0.27
SMARCA2-254ENST00000636903 TTLL11Q8NHH1 800 aa16.72■□□□□ 0.27
SMARCA2-254ENST00000636903 DBNDD2Q9BQY9 259 aa16.72■□□□□ 0.27
SMARCA2-254ENST00000636903 DBNLQ9UJU6 430 aaKnown RBP16.72■□□□□ 0.27
SMARCA2-254ENST00000636903 CCDC57Q2TAC2 916 aa16.71■□□□□ 0.27
SMARCA2-254ENST00000636903 CHGBP05060 677 aa16.71■□□□□ 0.26
SMARCA2-254ENST00000636903 HSP90AB3PQ58FF7 597 aa16.71■□□□□ 0.26
SMARCA2-254ENST00000636903 NEUROD6Q96NK8 337 aa16.71■□□□□ 0.26
SMARCA2-254ENST00000636903 BCL2L12Q9HB09 334 aa16.71■□□□□ 0.26
SMARCA2-254ENST00000636903 COL5A3P25940 1745 aaPredicted RBP16.7■□□□□ 0.26
SMARCA2-254ENST00000636903 ITGA6P23229 1130 aa16.7■□□□□ 0.26
SMARCA2-254ENST00000636903 TNNI3KQ59H18 835 aa16.7■□□□□ 0.26
SMARCA2-254ENST00000636903 ECHDC1Q9NTX5 307 aa16.7■□□□□ 0.26
SMARCA2-254ENST00000636903 FPGT-TNNI3KV9GXZ4 949 aa16.7■□□□□ 0.26
SMARCA2-254ENST00000636903 NHSQ6T4R5 1651 aa16.7■□□□□ 0.26
SMARCA2-254ENST00000636903 TBC1D9BQ66K14 1250 aa16.7■□□□□ 0.26
SMARCA2-254ENST00000636903 FAM196AQ6ZSG2 479 aa16.7■□□□□ 0.26
SMARCA2-254ENST00000636903 SPRYD3Q8NCJ5 442 aa16.7■□□□□ 0.26
SMARCA2-254ENST00000636903 SEC31BQ9NQW1 1179 aa16.7■□□□□ 0.26
SMARCA2-254ENST00000636903 SNAP23O00161 211 aa16.69■□□□□ 0.26
SMARCA2-254ENST00000636903 CTSWP56202 376 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms