RNA–Protein interactions for RNA: ENST00000636751.2

TCF4-280, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 8,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-280	ENST00000636751	CCDC152	Q4G0S7	254 aa		5.68	□□□□□ -1.5
TCF4-280	ENST00000636751	ARHGAP45	Q92619	1136 aa		5.68	□□□□□ -1.5
TCF4-280	ENST00000636751	SPATA31A3	Q5VYP0	1347 aa		5.68	□□□□□ -1.5
TCF4-280	ENST00000636751	MYH11	P35749	1972 aa		5.68	□□□□□ -1.5
TCF4-280	ENST00000636751	CDR1	P51861	262 aa		5.68	□□□□□ -1.5
TCF4-280	ENST00000636751	CAVIN4	Q5BKX8	364 aa		5.68	□□□□□ -1.5
TCF4-280	ENST00000636751	FOXD4L5	Q5VV16	416 aa	Predicted RBP	5.68	□□□□□ -1.5
TCF4-280	ENST00000636751	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	5.68	□□□□□ -1.5
TCF4-280	ENST00000636751	CIZ1	Q9ULV3	898 aa	Predicted RBP	5.68	□□□□□ -1.5
TCF4-280	ENST00000636751	PARP3	Q9Y6F1	533 aa		5.68	□□□□□ -1.5
TCF4-280	ENST00000636751	ADGRF5	Q8IZF2	1346 aa		5.68	□□□□□ -1.5
TCF4-280	ENST00000636751	GC	P02774	474 aa		5.68	□□□□□ -1.5
TCF4-280	ENST00000636751	BARGIN	Q6ZT62	677 aa		5.68	□□□□□ -1.5
TCF4-280	ENST00000636751	ANKRD24	Q8TF21	1146 aa		5.68	□□□□□ -1.5
TCF4-280	ENST00000636751	BRMS1	Q9HCU9	246 aa		5.68	□□□□□ -1.5
TCF4-280	ENST00000636751	CTNNA3	Q9UI47	895 aa		5.68	□□□□□ -1.5
TCF4-280	ENST00000636751	ZKSCAN1	P17029	563 aa	Predicted RBP	5.68	□□□□□ -1.5
TCF4-280	ENST00000636751	MIER1	Q8N108	512 aa		5.68	□□□□□ -1.5
TCF4-280	ENST00000636751	TBC1D22A	Q8WUA7	517 aa		5.68	□□□□□ -1.5
TCF4-280	ENST00000636751	C8orf37	Q96NL8	207 aa		5.68	□□□□□ -1.5
TCF4-280	ENST00000636751	AKAP17A	Q02040	695 aa	Known RBP	5.68	□□□□□ -1.5
TCF4-280	ENST00000636751	HDGFL1	Q5TGJ6	251 aa		5.68	□□□□□ -1.5
TCF4-280	ENST00000636751	LEKR1	Q6ZMV7	388 aa		5.68	□□□□□ -1.5
TCF4-280	ENST00000636751	CNKSR1	Q969H4	720 aa		5.68	□□□□□ -1.5
TCF4-280	ENST00000636751	RUFY1	Q96T51	708 aa		5.68	□□□□□ -1.5
TCF4-280	ENST00000636751	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	5.68	□□□□□ -1.5
TCF4-280	ENST00000636751	NUP98	P52948	1817 aa		5.67	□□□□□ -1.5
TCF4-280	ENST00000636751	GRIN3B	O60391	1043 aa		5.67	□□□□□ -1.5
TCF4-280	ENST00000636751	ARMCX6	Q7L4S7	300 aa		5.67	□□□□□ -1.5
TCF4-280	ENST00000636751	RNF216	Q9NWF9	866 aa	Predicted RBP	5.67	□□□□□ -1.5
TCF4-280	ENST00000636751	LIMCH1	Q9UPQ0	1083 aa		5.67	□□□□□ -1.5
TCF4-280	ENST00000636751		U3KPZ7	1027 aa	Predicted RBP	5.67	□□□□□ -1.5
TCF4-280	ENST00000636751	CPSF1	Q10570	1443 aa	Known RBP	5.67	□□□□□ -1.5
TCF4-280	ENST00000636751	UBTFL1	P0CB47	393 aa	Predicted RBP	5.67	□□□□□ -1.5
TCF4-280	ENST00000636751	CEBPA	P49715	358 aa	Predicted RBP	5.67	□□□□□ -1.5
TCF4-280	ENST00000636751	DDX46	Q7L014	1031 aa	Known RBP	5.67	□□□□□ -1.5
TCF4-280	ENST00000636751	CLASRP	Q8N2M8	674 aa	Known RBP	5.67	□□□□□ -1.5
TCF4-280	ENST00000636751	SH2D4A	Q9H788	454 aa		5.67	□□□□□ -1.5
TCF4-280	ENST00000636751	KIAA0232	Q92628	1395 aa		5.67	□□□□□ -1.5
TCF4-280	ENST00000636751	BAG3	O95817	575 aa		5.67	□□□□□ -1.5
TCF4-280	ENST00000636751	TMEM132E	Q6IEE7	984 aa		5.67	□□□□□ -1.5
TCF4-280	ENST00000636751	GLT8D2	Q9H1C3	349 aa		5.67	□□□□□ -1.5
TCF4-280	ENST00000636751	CCDC158	Q5M9N0	1113 aa		5.67	□□□□□ -1.5
TCF4-280	ENST00000636751	OGFOD1	Q8N543	542 aa		5.67	□□□□□ -1.5
TCF4-280	ENST00000636751	SETDB2	Q96T68	719 aa		5.67	□□□□□ -1.5
TCF4-280	ENST00000636751	RCAN3	Q9UKA8	241 aa		5.67	□□□□□ -1.5
TCF4-280	ENST00000636751	NOP2	P46087	812 aa	Known RBP	5.67	□□□□□ -1.5
TCF4-280	ENST00000636751	GTPBP4	Q9BZE4	634 aa	Known RBP	5.67	□□□□□ -1.5
TCF4-280	ENST00000636751	IFIT1	P09914	478 aa	Known RBP	5.67	□□□□□ -1.5
TCF4-280	ENST00000636751	JDP2	Q8WYK2	163 aa		5.67	□□□□□ -1.5
TCF4-280	ENST00000636751	SYAP1	Q96A49	352 aa	Predicted RBP	5.67	□□□□□ -1.5
TCF4-280	ENST00000636751	LTV1	Q96GA3	475 aa	Predicted RBP	5.67	□□□□□ -1.5
TCF4-280	ENST00000636751	SLIT3	O75094	1523 aa		5.67	□□□□□ -1.5
TCF4-280	ENST00000636751	VPS33B	Q9H267	617 aa		5.67	□□□□□ -1.5
TCF4-280	ENST00000636751	SH3BP5	O60239	455 aa		5.66	□□□□□ -1.5
TCF4-280	ENST00000636751	GZF1	Q9H116	711 aa	Predicted RBP	5.66	□□□□□ -1.5
TCF4-280	ENST00000636751	MYOM1	P52179	1685 aa		5.66	□□□□□ -1.5
TCF4-280	ENST00000636751	GNAI2	P04899	355 aa		5.66	□□□□□ -1.5
TCF4-280	ENST00000636751	LIG1	P18858	919 aa		5.66	□□□□□ -1.5
TCF4-280	ENST00000636751	KRT32	Q14532	448 aa		5.66	□□□□□ -1.5
TCF4-280	ENST00000636751	SMAP1	Q8IYB5	467 aa	Predicted RBP	5.66	□□□□□ -1.5
TCF4-280	ENST00000636751	GCC1	Q96CN9	775 aa		5.66	□□□□□ -1.5
TCF4-280	ENST00000636751	MYO3B	Q8WXR4	1341 aa		5.66	□□□□□ -1.5
TCF4-280	ENST00000636751	CD163L1	Q9NR16	1453 aa		5.66	□□□□□ -1.5
TCF4-280	ENST00000636751	KDM4A	O75164	1064 aa		5.66	□□□□□ -1.5
TCF4-280	ENST00000636751	ALDH1L1	O75891	902 aa		5.66	□□□□□ -1.5
TCF4-280	ENST00000636751	PSMA5	P28066	241 aa		5.66	□□□□□ -1.5
TCF4-280	ENST00000636751	MCTP2	Q6DN12	878 aa		5.66	□□□□□ -1.5
TCF4-280	ENST00000636751	DPY19L2	Q6NUT2	758 aa		5.66	□□□□□ -1.5
TCF4-280	ENST00000636751	CLEC4G	Q6UXB4	293 aa		5.66	□□□□□ -1.5
TCF4-280	ENST00000636751	ANKRD1	Q15327	319 aa		5.66	□□□□□ -1.5
TCF4-280	ENST00000636751	CT47A1	Q5JQC4	288 aa	Predicted RBP	5.66	□□□□□ -1.5
TCF4-280	ENST00000636751	BANK1	Q8NDB2	785 aa		5.66	□□□□□ -1.5
TCF4-280	ENST00000636751	SOS2	Q07890	1332 aa	Predicted RBP	5.66	□□□□□ -1.5
TCF4-280	ENST00000636751	FKBP5	Q13451	457 aa	Predicted RBP	5.66	□□□□□ -1.5
TCF4-280	ENST00000636751	SSH2	Q76I76	1423 aa		5.66	□□□□□ -1.5
TCF4-280	ENST00000636751	PDC	P20941	246 aa		5.66	□□□□□ -1.5
TCF4-280	ENST00000636751	WASHC4	Q2M389	1173 aa		5.66	□□□□□ -1.5
TCF4-280	ENST00000636751	NFATC2IP	Q8NCF5	419 aa		5.66	□□□□□ -1.5
TCF4-280	ENST00000636751	CCDC47	Q96A33	483 aa	Known RBP	5.66	□□□□□ -1.5
TCF4-280	ENST00000636751	CCDC43	Q96MW1	224 aa	Known RBP	5.66	□□□□□ -1.5
TCF4-280	ENST00000636751	MYO10	Q9HD67	2058 aa		5.65	□□□□□ -1.5
TCF4-280	ENST00000636751	ZFY	P08048	801 aa	Predicted RBP	5.65	□□□□□ -1.5
TCF4-280	ENST00000636751	BEGAIN	Q9BUH8	593 aa		5.65	□□□□□ -1.5
TCF4-280	ENST00000636751		A0A1W2PP64	1363 aa		5.65	□□□□□ -1.5
TCF4-280	ENST00000636751	ST18	O60284	1047 aa		5.65	□□□□□ -1.5
TCF4-280	ENST00000636751	CENPQ	Q7L2Z9	268 aa	Predicted RBP	5.65	□□□□□ -1.5
TCF4-280	ENST00000636751	MYH10	P35580	1976 aa		5.65	□□□□□ -1.5
TCF4-280	ENST00000636751	PEAK1	Q9H792	1746 aa		5.65	□□□□□ -1.5
TCF4-280	ENST00000636751	LRP6	O75581	1613 aa		5.65	□□□□□ -1.5
TCF4-280	ENST00000636751	IFIT2	P09913	472 aa	Known RBP	5.65	□□□□□ -1.5
TCF4-280	ENST00000636751	TNPO1	Q92973	898 aa	Known RBP	5.65	□□□□□ -1.5
TCF4-280	ENST00000636751	ZHX1	Q9UKY1	873 aa	Predicted RBP	5.65	□□□□□ -1.5
TCF4-280	ENST00000636751	CDKL5	O76039	1030 aa		5.65	□□□□□ -1.5
TCF4-280	ENST00000636751	TRIM29	Q14134	588 aa		5.65	□□□□□ -1.5
TCF4-280	ENST00000636751	NLRP3	Q96P20	1036 aa		5.65	□□□□□ -1.5
TCF4-280	ENST00000636751	RNF41	Q9H4P4	317 aa	Predicted RBP	5.65	□□□□□ -1.5
TCF4-280	ENST00000636751	ARGLU1	Q9NWB6	273 aa	Predicted RBP	5.65	□□□□□ -1.5
TCF4-280	ENST00000636751	ZNHIT6	Q9NWK9	470 aa	Known RBP	5.65	□□□□□ -1.5
TCF4-280	ENST00000636751	QSER1	Q2KHR3	1735 aa		5.65	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms