RNA–Protein interactions for RNA: ENST00000636652.1

CHRNA4-216, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 195 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-216ENST00000636652 USP44Q9H0E7 712 aa16.84■□□□□ 0.29
CHRNA4-216ENST00000636652 UTYO14607 1347 aa16.84■□□□□ 0.29
CHRNA4-216ENST00000636652 CARMIL3Q8ND23 1372 aa16.84■□□□□ 0.29
CHRNA4-216ENST00000636652 NUP98P52948 1817 aa16.84■□□□□ 0.29
CHRNA4-216ENST00000636652 SOCS7O14512 581 aa16.83■□□□□ 0.28
CHRNA4-216ENST00000636652 GNAI3P08754 354 aa16.83■□□□□ 0.28
CHRNA4-216ENST00000636652 TM4SF1P30408 202 aa16.83■□□□□ 0.28
CHRNA4-216ENST00000636652 AAMPQ13685 434 aa16.83■□□□□ 0.28
CHRNA4-216ENST00000636652 BICDL1Q6ZP65 573 aa16.83■□□□□ 0.28
CHRNA4-216ENST00000636652 PPP1R42Q7Z4L9 355 aa16.83■□□□□ 0.28
CHRNA4-216ENST00000636652 MEIS3Q99687 375 aa16.83■□□□□ 0.28
CHRNA4-216ENST00000636652 C9orf78Q9NZ63 289 aaPredicted RBP16.83■□□□□ 0.28
CHRNA4-216ENST00000636652 H7C1W4 665 aa16.82■□□□□ 0.28
CHRNA4-216ENST00000636652 PCCAP05165 728 aaPredicted RBP16.82■□□□□ 0.28
CHRNA4-216ENST00000636652 SUSD4Q5VX71 490 aa16.82■□□□□ 0.28
CHRNA4-216ENST00000636652 ZBTB38Q8NAP3 1195 aaPredicted RBP16.82■□□□□ 0.28
CHRNA4-216ENST00000636652 EXOC6Q8TAG9 804 aa16.82■□□□□ 0.28
CHRNA4-216ENST00000636652 UTP14AQ9BVJ6 771 aaKnown RBP16.82■□□□□ 0.28
CHRNA4-216ENST00000636652 NYXQ9GZU5 481 aa16.82■□□□□ 0.28
CHRNA4-216ENST00000636652 HDAC5Q9UQL6 1122 aa16.82■□□□□ 0.28
CHRNA4-216ENST00000636652 COL24A1Q17RW2 1714 aa16.82■□□□□ 0.28
CHRNA4-216ENST00000636652 NTSR2O95665 410 aa16.81■□□□□ 0.28
CHRNA4-216ENST00000636652 UBTFL1P0CB47 393 aaPredicted RBP16.81■□□□□ 0.28
CHRNA4-216ENST00000636652 CASP7P55210 303 aa16.81■□□□□ 0.28
CHRNA4-216ENST00000636652 PDGFDQ9GZP0 370 aaPredicted RBP16.81■□□□□ 0.28
CHRNA4-216ENST00000636652 ZBTB40Q9NUA8 1239 aa16.81■□□□□ 0.28
CHRNA4-216ENST00000636652 TRMT112Q9UI30 125 aaKnown RBP16.81■□□□□ 0.28
CHRNA4-216ENST00000636652 CASZ1Q86V15 1759 aa16.81■□□□□ 0.28
CHRNA4-216ENST00000636652 SH3TC1Q8TE82 1336 aa16.8■□□□□ 0.28
CHRNA4-216ENST00000636652 NBPF7P0C2Y1 421 aaPredicted RBP16.8■□□□□ 0.28
CHRNA4-216ENST00000636652 DDR1Q08345 913 aa16.8■□□□□ 0.28
CHRNA4-216ENST00000636652 UBE3BQ7Z3V4 1068 aa16.8■□□□□ 0.28
CHRNA4-216ENST00000636652 NBPF5PQ86XG9 351 aaPredicted RBP16.8■□□□□ 0.28
CHRNA4-216ENST00000636652 CDHR2Q9BYE9 1310 aa16.79■□□□□ 0.28
CHRNA4-216ENST00000636652 POLRMTO00411 1230 aaKnown RBP16.79■□□□□ 0.28
CHRNA4-216ENST00000636652 MMP10P09238 476 aa16.79■□□□□ 0.28
CHRNA4-216ENST00000636652 ERICH6BQ5W0A0 696 aa16.79■□□□□ 0.28
CHRNA4-216ENST00000636652 MSL1Q68DK7 614 aa16.79■□□□□ 0.28
CHRNA4-216ENST00000636652 TPTE2Q6XPS3 522 aa16.79■□□□□ 0.28
CHRNA4-216ENST00000636652 AFDNP55196 1824 aaKnown RBP16.79■□□□□ 0.28
CHRNA4-216ENST00000636652 PSDA5PKW4 1024 aaPredicted RBP16.78■□□□□ 0.28
CHRNA4-216ENST00000636652 FAM177BA6PVY3 158 aa16.78■□□□□ 0.28
CHRNA4-216ENST00000636652 GNAI2P04899 355 aa16.78■□□□□ 0.28
CHRNA4-216ENST00000636652 SERPINB2P05120 415 aa16.78■□□□□ 0.28
CHRNA4-216ENST00000636652 HSP90B1P14625 803 aaKnown RBP16.78■□□□□ 0.28
CHRNA4-216ENST00000636652 FAM89AQ96GI7 184 aa16.78■□□□□ 0.28
CHRNA4-216ENST00000636652 MTFR1LQ9H019 292 aa16.78■□□□□ 0.28
CHRNA4-216ENST00000636652 CNBD1Q8NA66 436 aa16.77■□□□□ 0.28
CHRNA4-216ENST00000636652 PLA2G12BQ9BX93 195 aa16.77■□□□□ 0.28
CHRNA4-216ENST00000636652 PARP3Q9Y6F1 533 aa16.77■□□□□ 0.28
CHRNA4-216ENST00000636652 IRS4O14654 1257 aaPredicted RBP16.76■□□□□ 0.27
CHRNA4-216ENST00000636652 GTF2E1P29083 439 aaPredicted RBP16.76■□□□□ 0.27
CHRNA4-216ENST00000636652 JARID2Q92833 1246 aaPredicted RBP16.76■□□□□ 0.27
CHRNA4-216ENST00000636652 SUCLG2Q96I99 432 aa16.76■□□□□ 0.27
CHRNA4-216ENST00000636652 LRRFIP2Q9Y608 721 aaKnown RBP16.76■□□□□ 0.27
CHRNA4-216ENST00000636652 RIC1Q4ADV7 1423 aa16.76■□□□□ 0.27
CHRNA4-216ENST00000636652 NPHP1O15259 732 aa16.75■□□□□ 0.27
CHRNA4-216ENST00000636652 ZBTB7AO95365 584 aa16.75■□□□□ 0.27
CHRNA4-216ENST00000636652 ST5P78524 1137 aa16.75■□□□□ 0.27
CHRNA4-216ENST00000636652 ERFEQ4G0M1 354 aa16.75■□□□□ 0.27
CHRNA4-216ENST00000636652 RTL5Q5HYW3 569 aaPredicted RBP16.75■□□□□ 0.27
CHRNA4-216ENST00000636652 SLC10A5Q5PT55 438 aa16.75■□□□□ 0.27
CHRNA4-216ENST00000636652 PRR5LQ6MZQ0 368 aa16.75■□□□□ 0.27
CHRNA4-216ENST00000636652 NUTM1Q86Y26 1132 aa16.75■□□□□ 0.27
CHRNA4-216ENST00000636652 ABCC12Q96J65 1359 aa16.75■□□□□ 0.27
CHRNA4-216ENST00000636652 SYNE4Q8N205 404 aa16.74■□□□□ 0.27
CHRNA4-216ENST00000636652 KAZALD1Q96I82 304 aa16.74■□□□□ 0.27
CHRNA4-216ENST00000636652 C1orf115Q9H7X2 142 aa16.74■□□□□ 0.27
CHRNA4-216ENST00000636652 PDE8AO60658 829 aa16.73■□□□□ 0.27
CHRNA4-216ENST00000636652 POLD1P28340 1107 aa16.73■□□□□ 0.27
CHRNA4-216ENST00000636652 RABL6Q3YEC7 729 aaPredicted RBP16.73■□□□□ 0.27
CHRNA4-216ENST00000636652 BICC1Q9H694 974 aaKnown RBP16.73■□□□□ 0.27
CHRNA4-216ENST00000636652 NRXN2Q9P2S2 1712 aa16.73■□□□□ 0.27
CHRNA4-216ENST00000636652 HCLS1P14317 486 aaPredicted RBP16.72■□□□□ 0.27
CHRNA4-216ENST00000636652 FOXO4P98177 505 aa16.72■□□□□ 0.27
CHRNA4-216ENST00000636652 MTX1Q13505 466 aa16.72■□□□□ 0.27
CHRNA4-216ENST00000636652 EPHA10Q5JZY3 1008 aa16.72■□□□□ 0.27
CHRNA4-216ENST00000636652 CEP85Q6P2H3 762 aa16.72■□□□□ 0.27
CHRNA4-216ENST00000636652 RPAP2Q8IXW5 612 aaPredicted RBP16.72■□□□□ 0.27
CHRNA4-216ENST00000636652 ANKRD44Q8N8A2 993 aa16.72■□□□□ 0.27
CHRNA4-216ENST00000636652 CTSWP56202 376 aa16.71■□□□□ 0.27
CHRNA4-216ENST00000636652 ATF5Q9Y2D1 282 aaPredicted RBP16.71■□□□□ 0.27
CHRNA4-216ENST00000636652 PCDHB15Q9Y5E8 787 aa16.71■□□□□ 0.27
CHRNA4-216ENST00000636652 LAMB2P55268 1798 aa16.71■□□□□ 0.27
CHRNA4-216ENST00000636652 CSF1RP07333 972 aa16.7■□□□□ 0.26
CHRNA4-216ENST00000636652 NLRP3Q96P20 1036 aa16.7■□□□□ 0.26
CHRNA4-216ENST00000636652 BRIP1Q9BX63 1249 aa16.7■□□□□ 0.26
CHRNA4-216ENST00000636652 RTL9Q8NET4 1388 aa16.69■□□□□ 0.26
CHRNA4-216ENST00000636652 ATP8B2P98198 1209 aa16.69■□□□□ 0.26
CHRNA4-216ENST00000636652 SF3B3Q15393 1217 aaKnown RBP16.69■□□□□ 0.26
CHRNA4-216ENST00000636652 LMBR1LQ6UX01 489 aa16.69■□□□□ 0.26
CHRNA4-216ENST00000636652 CCDC24Q8N4L8 307 aa16.69■□□□□ 0.26
CHRNA4-216ENST00000636652 TTLL11Q8NHH1 800 aa16.69■□□□□ 0.26
CHRNA4-216ENST00000636652 SGIP1Q9BQI5 828 aa16.69■□□□□ 0.26
CHRNA4-216ENST00000636652 C10orf71Q711Q0 1435 aa16.69■□□□□ 0.26
CHRNA4-216ENST00000636652 DDX60Q8IY21 1712 aaKnown RBP16.68■□□□□ 0.26
CHRNA4-216ENST00000636652 HMMRO75330 724 aa16.68■□□□□ 0.26
CHRNA4-216ENST00000636652 CCDC152Q4G0S7 254 aa16.68■□□□□ 0.26
CHRNA4-216ENST00000636652 SPON1Q9HCB6 807 aa16.68■□□□□ 0.26
CHRNA4-216ENST00000636652 KLRG2A4D1S0 409 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms