RNA–Protein interactions for RNA: ENST00000636405.1

CLN5-209, Transcript of CLN5, intracellular trafficking protein, humanhuman

Gene CLN5, Length 2,511 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-209ENST00000636405 GAS2L3Q86XJ1 694 aa18.12■□□□□ 0.49
CLN5-209ENST00000636405 FSD2A1L4K1 749 aa18.12■□□□□ 0.49
CLN5-209ENST00000636405 NMIQ13287 307 aaPredicted RBP18.12■□□□□ 0.49
CLN5-209ENST00000636405 EVI5LQ96CN4 794 aa18.12■□□□□ 0.49
CLN5-209ENST00000636405 NCLP19338 710 aaKnown RBP18.11■□□□□ 0.49
CLN5-209ENST00000636405 COL9A3Q14050 684 aaPredicted RBP18.11■□□□□ 0.49
CLN5-209ENST00000636405 ADCK5Q3MIX3 580 aa18.11■□□□□ 0.49
CLN5-209ENST00000636405 BTG4Q9NY30 223 aa18.11■□□□□ 0.49
CLN5-209ENST00000636405 DDX49Q9Y6V7 483 aaKnown RBP18.11■□□□□ 0.49
CLN5-209ENST00000636405 ERVV-2B6SEH9 535 aa18.11■□□□□ 0.49
CLN5-209ENST00000636405 CASP7P55210 303 aa18.11■□□□□ 0.49
CLN5-209ENST00000636405 DBNLQ9UJU6 430 aaKnown RBP18.1■□□□□ 0.49
CLN5-209ENST00000636405 ASAP1Q9ULH1 1129 aa18.1■□□□□ 0.49
CLN5-209ENST00000636405 GOLGA6L22H0YM25 854 aa18.1■□□□□ 0.49
CLN5-209ENST00000636405 PRPF40AO75400 957 aaKnown RBP18.1■□□□□ 0.49
CLN5-209ENST00000636405 FSD1Q9BTV5 496 aa18.1■□□□□ 0.49
CLN5-209ENST00000636405 A0A0D9SFI3 127 aa18.09■□□□□ 0.49
CLN5-209ENST00000636405 CASTP20810 708 aaKnown RBP18.09■□□□□ 0.49
CLN5-209ENST00000636405 AK2P54819 239 aa18.09■□□□□ 0.49
CLN5-209ENST00000636405 CUL4AQ13619 759 aa18.09■□□□□ 0.49
CLN5-209ENST00000636405 L1TD1Q5T7N2 865 aaKnown RBP18.09■□□□□ 0.49
CLN5-209ENST00000636405 CLEC17AQ6ZS10 378 aa18.09■□□□□ 0.49
CLN5-209ENST00000636405 COPRSQ9NQ92 184 aa18.09■□□□□ 0.49
CLN5-209ENST00000636405 MCM2P49736 904 aa18.09■□□□□ 0.49
CLN5-209ENST00000636405 DBNDD2Q9BQY9 259 aa18.09■□□□□ 0.49
CLN5-209ENST00000636405 GLI3P10071 1580 aa18.08■□□□□ 0.49
CLN5-209ENST00000636405 NKX1-1Q15270 411 aaPredicted RBP18.08■□□□□ 0.49
CLN5-209ENST00000636405 TNNI3KQ59H18 835 aa18.08■□□□□ 0.49
CLN5-209ENST00000636405 ZNF594Q96JF6 807 aaPredicted RBP18.08■□□□□ 0.49
CLN5-209ENST00000636405 FPGT-TNNI3KV9GXZ4 949 aa18.08■□□□□ 0.49
CLN5-209ENST00000636405 ABCC6O95255 1503 aa18.08■□□□□ 0.48
CLN5-209ENST00000636405 FOXO4P98177 505 aa18.08■□□□□ 0.48
CLN5-209ENST00000636405 RABL6Q3YEC7 729 aaPredicted RBP18.08■□□□□ 0.48
CLN5-209ENST00000636405 RUFY2Q8WXA3 655 aa18.08■□□□□ 0.48
CLN5-209ENST00000636405 CCDC85AQ96PX6 553 aaPredicted RBP18.08■□□□□ 0.48
CLN5-209ENST00000636405 LMBRD1Q9NUN5 540 aa18.08■□□□□ 0.48
CLN5-209ENST00000636405 RUFY3Q7L099 469 aa18.07■□□□□ 0.48
CLN5-209ENST00000636405 JAKMIP1Q96N16 626 aaKnown RBP18.07■□□□□ 0.48
CLN5-209ENST00000636405 TMOD3Q9NYL9 352 aa18.07■□□□□ 0.48
CLN5-209ENST00000636405 TTC14Q96N46 770 aa18.07■□□□□ 0.48
CLN5-209ENST00000636405 DNAJC2Q99543 621 aaKnown RBP18.07■□□□□ 0.48
CLN5-209ENST00000636405 TAF6LQ9Y6J9 622 aa18.07■□□□□ 0.48
CLN5-209ENST00000636405 H7C1W4 665 aa18.06■□□□□ 0.48
CLN5-209ENST00000636405 LARGE1O95461 756 aa18.06■□□□□ 0.48
CLN5-209ENST00000636405 KCNJ4P48050 445 aa18.06■□□□□ 0.48
CLN5-209ENST00000636405 SKOR2Q2VWA4 1001 aaPredicted RBP18.06■□□□□ 0.48
CLN5-209ENST00000636405 ZNF589Q86UQ0 364 aaPredicted RBP18.06■□□□□ 0.48
CLN5-209ENST00000636405 DNAJC10Q8IXB1 793 aa18.06■□□□□ 0.48
CLN5-209ENST00000636405 PIGBQ92521 554 aa18.06■□□□□ 0.48
CLN5-209ENST00000636405 IL17RAQ96F46 866 aa18.06■□□□□ 0.48
CLN5-209ENST00000636405 CWC25Q9NXE8 425 aaPredicted RBP18.06■□□□□ 0.48
CLN5-209ENST00000636405 RBM8AQ9Y5S9 174 aaKnown RBP18.06■□□□□ 0.48
CLN5-209ENST00000636405 SLFNL1Q499Z3 407 aa18.05■□□□□ 0.48
CLN5-209ENST00000636405 TCEANC2Q96MN5 208 aa18.05■□□□□ 0.48
CLN5-209ENST00000636405 NEUROD6Q96NK8 337 aa18.05■□□□□ 0.48
CLN5-209ENST00000636405 CCDC171Q6TFL3 1326 aa18.05■□□□□ 0.48
CLN5-209ENST00000636405 TIMM10P62072 90 aa18.05■□□□□ 0.48
CLN5-209ENST00000636405 CAVIN1Q6NZI2 390 aaKnown RBP18.05■□□□□ 0.48
CLN5-209ENST00000636405 RBM27Q9P2N5 1060 aaKnown RBP18.05■□□□□ 0.48
CLN5-209ENST00000636405 NSFL1CQ9UNZ2 370 aaKnown RBP18.05■□□□□ 0.48
CLN5-209ENST00000636405 KCPQ6ZWJ8 1503 aa18.04■□□□□ 0.48
CLN5-209ENST00000636405 LRRC24Q50LG9 513 aa18.04■□□□□ 0.48
CLN5-209ENST00000636405 GRPEL1Q9HAV7 217 aa18.04■□□□□ 0.48
CLN5-209ENST00000636405 ARFGEF2Q9Y6D5 1785 aa18.04■□□□□ 0.48
CLN5-209ENST00000636405 AFDNP55196 1824 aaKnown RBP18.04■□□□□ 0.48
CLN5-209ENST00000636405 NECTIN1Q15223 517 aa18.04■□□□□ 0.48
CLN5-209ENST00000636405 TPRNQ4KMQ1 711 aa18.04■□□□□ 0.48
CLN5-209ENST00000636405 SYTL4Q96C24 671 aaPredicted RBP18.04■□□□□ 0.48
CLN5-209ENST00000636405 SEC62Q99442 399 aaKnown RBP18.04■□□□□ 0.48
CLN5-209ENST00000636405 BRD1O95696 1058 aa18.03■□□□□ 0.48
CLN5-209ENST00000636405 KLHL40Q2TBA0 621 aa18.03■□□□□ 0.48
CLN5-209ENST00000636405 CCDC129Q6ZRS4 1044 aa18.03■□□□□ 0.48
CLN5-209ENST00000636405 DDX46Q7L014 1031 aaKnown RBP18.03■□□□□ 0.48
CLN5-209ENST00000636405 PUS3Q9BZE2 481 aaKnown RBP18.03■□□□□ 0.48
CLN5-209ENST00000636405 GDPD2Q9HCC8 539 aa18.03■□□□□ 0.48
CLN5-209ENST00000636405 EPB41L2O43491 1005 aaKnown RBP18.03■□□□□ 0.48
CLN5-209ENST00000636405 CREB3L3Q68CJ9 461 aa18.03■□□□□ 0.48
CLN5-209ENST00000636405 SYNE4Q8N205 404 aa18.03■□□□□ 0.48
CLN5-209ENST00000636405 GPT2Q8TD30 523 aa18.03■□□□□ 0.48
CLN5-209ENST00000636405 PARP4Q9UKK3 1724 aaKnown RBP18.03■□□□□ 0.48
CLN5-209ENST00000636405 ATG9AQ7Z3C6 839 aa18.02■□□□□ 0.48
CLN5-209ENST00000636405 INTS4Q96HW7 963 aaKnown RBP18.02■□□□□ 0.48
CLN5-209ENST00000636405 ATG3Q9NT62 314 aa18.02■□□□□ 0.47
CLN5-209ENST00000636405 PDRG1Q9NUG6 133 aa18.02■□□□□ 0.47
CLN5-209ENST00000636405 KAT6BQ8WYB5 2073 aa18.01■□□□□ 0.47
CLN5-209ENST00000636405 PLEKHG2Q9H7P9 1386 aa18.01■□□□□ 0.47
CLN5-209ENST00000636405 MAP4K1Q92918 833 aa18.01■□□□□ 0.47
CLN5-209ENST00000636405 FAM89AQ96GI7 184 aa18.01■□□□□ 0.47
CLN5-209ENST00000636405 LIMCH1Q9UPQ0 1083 aa18.01■□□□□ 0.47
CLN5-209ENST00000636405 ERBB4Q15303 1308 aa18.01■□□□□ 0.47
CLN5-209ENST00000636405 A0A0G2JS52 829 aa18.01■□□□□ 0.47
CLN5-209ENST00000636405 ATP5JP18859 108 aa18.01■□□□□ 0.47
CLN5-209ENST00000636405 CCDC83Q8IWF9 413 aa18.01■□□□□ 0.47
CLN5-209ENST00000636405 SLC27A2O14975 620 aa18■□□□□ 0.47
CLN5-209ENST00000636405 PTMSP20962 102 aa18■□□□□ 0.47
CLN5-209ENST00000636405 MRE11P49959 708 aa18■□□□□ 0.47
CLN5-209ENST00000636405 NECAB1Q8N987 351 aa18■□□□□ 0.47
CLN5-209ENST00000636405 COL15A1P39059 1388 aa17.99■□□□□ 0.47
CLN5-209ENST00000636405 GPTP24298 496 aa17.99■□□□□ 0.47
CLN5-209ENST00000636405 CCDC191Q8NCU4 936 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms