RNA–Protein interactions for RNA: ENST00000636044.1

CHRNA7-209, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-209ENST00000636044 C9orf131Q5VYM1 1079 aa26.56■■□□□ 1.84
CHRNA7-209ENST00000636044 ANKRD13DQ6ZTN6 518 aa26.56■■□□□ 1.84
CHRNA7-209ENST00000636044 UTP14AQ9BVJ6 771 aaKnown RBP26.56■■□□□ 1.84
CHRNA7-209ENST00000636044 ZNF219Q9P2Y4 722 aaPredicted RBP26.56■■□□□ 1.84
CHRNA7-209ENST00000636044 C21orf2O43822 256 aa26.55■■□□□ 1.84
CHRNA7-209ENST00000636044 NLRP10Q86W26 655 aa26.55■■□□□ 1.84
CHRNA7-209ENST00000636044 RNF123Q5XPI4 1314 aa26.55■■□□□ 1.84
CHRNA7-209ENST00000636044 DDX60Q8IY21 1712 aaKnown RBP26.54■■□□□ 1.84
CHRNA7-209ENST00000636044 GOLGA2Q08379 1002 aa26.54■■□□□ 1.84
CHRNA7-209ENST00000636044 TWISTNBQ3B726 338 aaPredicted RBP26.54■■□□□ 1.84
CHRNA7-209ENST00000636044 CRY2Q49AN0 593 aa26.54■■□□□ 1.84
CHRNA7-209ENST00000636044 ZNF526Q8TF50 670 aaPredicted RBP26.54■■□□□ 1.84
CHRNA7-209ENST00000636044 RNF181Q9P0P0 153 aa26.54■■□□□ 1.84
CHRNA7-209ENST00000636044 PHAXQ9H814 394 aaKnown RBP26.53■■□□□ 1.84
CHRNA7-209ENST00000636044 NFKBIEO00221 500 aa26.52■■□□□ 1.84
CHRNA7-209ENST00000636044 GPBP1L1Q9HC44 474 aaPredicted RBP26.52■■□□□ 1.84
CHRNA7-209ENST00000636044 CCER2I3L3R5 266 aa26.51■■□□□ 1.83
CHRNA7-209ENST00000636044 RPGRQ92834 1020 aaKnown RBP26.51■■□□□ 1.83
CHRNA7-209ENST00000636044 STK31Q9BXU1 1019 aa26.51■■□□□ 1.83
CHRNA7-209ENST00000636044 LMNB1P20700 586 aa26.5■■□□□ 1.83
CHRNA7-209ENST00000636044 SOGA3Q5TF21 947 aa26.5■■□□□ 1.83
CHRNA7-209ENST00000636044 RIC3Q7Z5B4 369 aa26.5■■□□□ 1.83
CHRNA7-209ENST00000636044 ISCA1Q9BUE6 129 aa26.49■■□□□ 1.83
CHRNA7-209ENST00000636044 MYH16Q9H6N6 1097 aa26.49■■□□□ 1.83
CHRNA7-209ENST00000636044 TRMT112Q9UI30 125 aaKnown RBP26.49■■□□□ 1.83
CHRNA7-209ENST00000636044 SH3TC1Q8TE82 1336 aa26.48■■□□□ 1.83
CHRNA7-209ENST00000636044 ATP5J2-PTCD1G3V325 749 aa26.48■■□□□ 1.83
CHRNA7-209ENST00000636044 TCERG1O14776 1098 aaKnown RBP26.48■■□□□ 1.83
CHRNA7-209ENST00000636044 ALDH1B1P30837 517 aa26.48■■□□□ 1.83
CHRNA7-209ENST00000636044 C3orf67Q6ZVT6 689 aa26.48■■□□□ 1.83
CHRNA7-209ENST00000636044 ZNF428Q96B54 188 aa26.48■■□□□ 1.83
CHRNA7-209ENST00000636044 SPINK5Q9NQ38 1064 aaPredicted RBP26.48■■□□□ 1.83
CHRNA7-209ENST00000636044 DDX58O95786 925 aaKnown RBP26.47■■□□□ 1.83
CHRNA7-209ENST00000636044 PRELPP51888 382 aa26.47■■□□□ 1.83
CHRNA7-209ENST00000636044 NLRP3Q96P20 1036 aa26.47■■□□□ 1.83
CHRNA7-209ENST00000636044 TAOK3Q9H2K8 898 aa26.47■■□□□ 1.83
CHRNA7-209ENST00000636044 ZNF521Q96K83 1311 aa26.46■■□□□ 1.83
CHRNA7-209ENST00000636044 LTBP3Q9NS15 1303 aa26.46■■□□□ 1.83
CHRNA7-209ENST00000636044 HOXA10P31260 410 aaPredicted RBP26.46■■□□□ 1.83
CHRNA7-209ENST00000636044 EXOSC9Q06265 439 aaKnown RBP26.46■■□□□ 1.83
CHRNA7-209ENST00000636044 CCDC93Q567U6 631 aa26.46■■□□□ 1.83
CHRNA7-209ENST00000636044 SLC10A5Q5PT55 438 aa26.46■■□□□ 1.83
CHRNA7-209ENST00000636044 C7orf43Q8WVR3 580 aa26.46■■□□□ 1.83
CHRNA7-209ENST00000636044 TAF1P21675 1872 aa26.46■■□□□ 1.83
CHRNA7-209ENST00000636044 SYNE4Q8N205 404 aa26.45■■□□□ 1.82
CHRNA7-209ENST00000636044 ZC3H4Q9UPT8 1303 aaKnown RBP26.44■■□□□ 1.82
CHRNA7-209ENST00000636044 HCLS1P14317 486 aaPredicted RBP26.44■■□□□ 1.82
CHRNA7-209ENST00000636044 RBM17Q96I25 401 aaKnown RBP26.43■■□□□ 1.82
CHRNA7-209ENST00000636044 MYD88Q99836 296 aa26.43■■□□□ 1.82
CHRNA7-209ENST00000636044 TRIM28Q13263 835 aaKnown RBP26.42■■□□□ 1.82
CHRNA7-209ENST00000636044 OLFM4Q6UX06 510 aa26.42■■□□□ 1.82
CHRNA7-209ENST00000636044 CRAMP1Q96RY5 1269 aa26.42■■□□□ 1.82
CHRNA7-209ENST00000636044 VAMP4O75379 141 aa26.41■■□□□ 1.82
CHRNA7-209ENST00000636044 SLC4A2P04920 1241 aa26.41■■□□□ 1.82
CHRNA7-209ENST00000636044 FAM89AQ96GI7 184 aa26.41■■□□□ 1.82
CHRNA7-209ENST00000636044 METTL22Q9BUU2 404 aaPredicted RBP26.41■■□□□ 1.82
CHRNA7-209ENST00000636044 MAP3K2Q9Y2U5 619 aa26.41■■□□□ 1.82
CHRNA7-209ENST00000636044 MYH3P11055 1940 aa26.41■■□□□ 1.82
CHRNA7-209ENST00000636044 DIEXFQ68CQ4 756 aaKnown RBP26.4■■□□□ 1.82
CHRNA7-209ENST00000636044 G2E3Q7L622 706 aa26.4■■□□□ 1.82
CHRNA7-209ENST00000636044 SNED1Q8TER0 1413 aa26.39■■□□□ 1.82
CHRNA7-209ENST00000636044 PI4KAP2A4QPH2 592 aa26.39■■□□□ 1.82
CHRNA7-209ENST00000636044 PPEF1O14829 653 aaPredicted RBP26.39■■□□□ 1.82
CHRNA7-209ENST00000636044 RTL5Q5HYW3 569 aaPredicted RBP26.39■■□□□ 1.82
CHRNA7-209ENST00000636044 KSR2Q6VAB6 950 aa26.39■■□□□ 1.82
CHRNA7-209ENST00000636044 RTKN2Q8IZC4 609 aa26.39■■□□□ 1.82
CHRNA7-209ENST00000636044 PI4KAP1Q8N8J0 262 aa26.39■■□□□ 1.82
CHRNA7-209ENST00000636044 ABCC4O15439 1325 aa26.39■■□□□ 1.81
CHRNA7-209ENST00000636044 KDM2BQ8NHM5 1336 aa26.39■■□□□ 1.81
CHRNA7-209ENST00000636044 FKBP4Q02790 459 aaKnown RBP eCLIP26.38■■□□□ 1.81
CHRNA7-209ENST00000636044 C1QTNF8P60827 252 aa26.37■■□□□ 1.81
CHRNA7-209ENST00000636044 FLIIQ13045 1269 aa26.37■■□□□ 1.81
CHRNA7-209ENST00000636044 CCDC191Q8NCU4 936 aa26.37■■□□□ 1.81
CHRNA7-209ENST00000636044 CWC25Q9NXE8 425 aaPredicted RBP26.37■■□□□ 1.81
CHRNA7-209ENST00000636044 LRRC37AA6NMS7 1700 aa26.36■■□□□ 1.81
CHRNA7-209ENST00000636044 CC2D2BQ6DHV5 1058 aa26.36■■□□□ 1.81
CHRNA7-209ENST00000636044 ZBTB38Q8NAP3 1195 aaPredicted RBP26.36■■□□□ 1.81
CHRNA7-209ENST00000636044 NMRK2Q9NPI5 230 aa26.36■■□□□ 1.81
CHRNA7-209ENST00000636044 IRS4O14654 1257 aaPredicted RBP26.35■■□□□ 1.81
CHRNA7-209ENST00000636044 KIF3CO14782 793 aa26.35■■□□□ 1.81
CHRNA7-209ENST00000636044 NEXNQ0ZGT2 675 aa26.34■■□□□ 1.81
CHRNA7-209ENST00000636044 FKBP5Q13451 457 aaPredicted RBP26.34■■□□□ 1.81
CHRNA7-209ENST00000636044 DDX46Q7L014 1031 aaKnown RBP26.34■■□□□ 1.81
CHRNA7-209ENST00000636044 ZNF277Q9NRM2 450 aaPredicted RBP26.34■■□□□ 1.81
CHRNA7-209ENST00000636044 E9PSI1 815 aa26.33■■□□□ 1.81
CHRNA7-209ENST00000636044 SLC51AQ86UW1 340 aa26.33■■□□□ 1.81
CHRNA7-209ENST00000636044 PCCAP05165 728 aaPredicted RBP26.32■■□□□ 1.8
CHRNA7-209ENST00000636044 PSMD1Q99460 953 aa26.32■■□□□ 1.8
CHRNA7-209ENST00000636044 WDR90Q96KV7 1748 aa26.31■■□□□ 1.8
CHRNA7-209ENST00000636044 IGKV5-2P06315 115 aa26.31■■□□□ 1.8
CHRNA7-209ENST00000636044 HSP90B1P14625 803 aaKnown RBP26.31■■□□□ 1.8
CHRNA7-209ENST00000636044 GRAPQ13588 217 aa26.31■■□□□ 1.8
CHRNA7-209ENST00000636044 GRIPAP1Q4V328 841 aa26.31■■□□□ 1.8
CHRNA7-209ENST00000636044 MIER1Q8N108 512 aa26.31■■□□□ 1.8
CHRNA7-209ENST00000636044 GRAPLQ8TC17 118 aaPredicted RBP26.31■■□□□ 1.8
CHRNA7-209ENST00000636044 TMX4Q9H1E5 349 aaPredicted RBP26.31■■□□□ 1.8
CHRNA7-209ENST00000636044 COL4A1P02462 1669 aa26.31■■□□□ 1.8
CHRNA7-209ENST00000636044 GLTPD2A6NH11 291 aa26.3■■□□□ 1.8
CHRNA7-209ENST00000636044 SF3B3Q15393 1217 aaKnown RBP26.3■■□□□ 1.8
CHRNA7-209ENST00000636044 ATP6V0A2Q9Y487 856 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms