RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 HOOK3Q86VS8 718 aa11.29□□□□□ -0.6
SPTAN1-228ENST00000635853 CNPY2Q9Y2B0 182 aa11.29□□□□□ -0.6
SPTAN1-228ENST00000635853 GOLGA6L10A0A0M3HER8 536 aa11.29□□□□□ -0.6
SPTAN1-228ENST00000635853 CCDC172P0C7W6 258 aa11.29□□□□□ -0.6
SPTAN1-228ENST00000635853 KIF4BQ2VIQ3 1234 aa11.29□□□□□ -0.6
SPTAN1-228ENST00000635853 CCDC50Q8IVM0 306 aa11.29□□□□□ -0.6
SPTAN1-228ENST00000635853 OTUD6BQ8N6M0 293 aa11.29□□□□□ -0.6
SPTAN1-228ENST00000635853 IFIT1P09914 478 aaKnown RBP11.29□□□□□ -0.6
SPTAN1-228ENST00000635853 HNRNPH2P55795 449 aaKnown RBP11.29□□□□□ -0.6
SPTAN1-228ENST00000635853 TMEM266Q2M3C6 531 aa11.29□□□□□ -0.6
SPTAN1-228ENST00000635853 DDX23Q9BUQ8 820 aaKnown RBP11.29□□□□□ -0.6
SPTAN1-228ENST00000635853 TMEM51Q9NW97 253 aa11.29□□□□□ -0.6
SPTAN1-228ENST00000635853 GSTTP1A0A1W2PQM5 241 aa11.28□□□□□ -0.6
SPTAN1-228ENST00000635853 TOP1P11387 765 aaKnown RBP11.28□□□□□ -0.6
SPTAN1-228ENST00000635853 HSPA4P34932 840 aa11.28□□□□□ -0.6
SPTAN1-228ENST00000635853 MCM6Q14566 821 aa11.28□□□□□ -0.6
SPTAN1-228ENST00000635853 CCDC178Q5BJE1 867 aa11.28□□□□□ -0.6
SPTAN1-228ENST00000635853 ZNF692Q9BU19 519 aaPredicted RBP11.28□□□□□ -0.6
SPTAN1-228ENST00000635853 SH2B1Q9NRF2 756 aaPredicted RBP11.28□□□□□ -0.6
SPTAN1-228ENST00000635853 GEMIN8Q9NWZ8 242 aaKnown RBP11.28□□□□□ -0.6
SPTAN1-228ENST00000635853 CFTRP13569 1480 aa11.28□□□□□ -0.6
SPTAN1-228ENST00000635853 CLNS1AP54105 237 aaKnown RBP11.28□□□□□ -0.6
SPTAN1-228ENST00000635853 FKBP15Q5T1M5 1219 aa11.28□□□□□ -0.6
SPTAN1-228ENST00000635853 AP1ARQ63HQ0 302 aa11.28□□□□□ -0.6
SPTAN1-228ENST00000635853 CTCFLQ8NI51 663 aaPredicted RBP11.28□□□□□ -0.6
SPTAN1-228ENST00000635853 GOPCQ9HD26 462 aa11.28□□□□□ -0.6
SPTAN1-228ENST00000635853 CADPSQ9ULU8 1353 aa11.28□□□□□ -0.6
SPTAN1-228ENST00000635853 MACROD2A1Z1Q3 448 aa11.28□□□□□ -0.6
SPTAN1-228ENST00000635853 ZNF853P0CG23 659 aa11.28□□□□□ -0.6
SPTAN1-228ENST00000635853 SYT10Q6XYQ8 523 aa11.28□□□□□ -0.6
SPTAN1-228ENST00000635853 AKAP2Q9Y2D5 859 aa11.28□□□□□ -0.6
SPTAN1-228ENST00000635853 LOC102724159A0A0B4J2E5 919 aa11.28□□□□□ -0.6
SPTAN1-228ENST00000635853 ZC3H6P61129 1189 aaKnown RBP11.28□□□□□ -0.6
SPTAN1-228ENST00000635853 PWP2Q15269 919 aaKnown RBP11.28□□□□□ -0.6
SPTAN1-228ENST00000635853 SPA17Q15506 151 aa11.28□□□□□ -0.6
SPTAN1-228ENST00000635853 CFAP100Q494V2 611 aa11.28□□□□□ -0.6
SPTAN1-228ENST00000635853 POGZQ7Z3K3 1410 aa11.28□□□□□ -0.6
SPTAN1-228ENST00000635853 MYO1BO43795 1136 aa11.27□□□□□ -0.6
SPTAN1-228ENST00000635853 FERP16591 822 aa11.27□□□□□ -0.6
SPTAN1-228ENST00000635853 NAA25Q14CX7 972 aa11.27□□□□□ -0.6
SPTAN1-228ENST00000635853 BLOC1S2Q6QNY1 142 aa11.27□□□□□ -0.6
SPTAN1-228ENST00000635853 TOP2BQ02880 1626 aa11.27□□□□□ -0.6
SPTAN1-228ENST00000635853 VPS36Q86VN1 386 aa11.27□□□□□ -0.6
SPTAN1-228ENST00000635853 TSNARE1Q96NA8 513 aa11.27□□□□□ -0.6
SPTAN1-228ENST00000635853 ZBTB22O15209 634 aa11.27□□□□□ -0.61
SPTAN1-228ENST00000635853 TYRO3Q06418 890 aa11.27□□□□□ -0.61
SPTAN1-228ENST00000635853 TTC22Q5TAA0 569 aa11.27□□□□□ -0.61
SPTAN1-228ENST00000635853 CEP57Q86XR8 500 aa11.27□□□□□ -0.61
SPTAN1-228ENST00000635853 NGLY1Q96IV0 654 aa11.27□□□□□ -0.61
SPTAN1-228ENST00000635853 DDX41Q9UJV9 622 aaKnown RBP11.27□□□□□ -0.61
SPTAN1-228ENST00000635853 PCF11O94913 1555 aaKnown RBP11.27□□□□□ -0.61
SPTAN1-228ENST00000635853 ATP8B1O43520 1251 aa11.27□□□□□ -0.61
SPTAN1-228ENST00000635853 GNG11P61952 73 aa11.27□□□□□ -0.61
SPTAN1-228ENST00000635853 ALDH1L2Q3SY69 923 aa11.27□□□□□ -0.61
SPTAN1-228ENST00000635853 CCDC83Q8IWF9 413 aa11.27□□□□□ -0.61
SPTAN1-228ENST00000635853 ZNF526Q8TF50 670 aaPredicted RBP11.27□□□□□ -0.61
SPTAN1-228ENST00000635853 ANKRD18BA2A2Z9 1011 aa11.27□□□□□ -0.61
SPTAN1-228ENST00000635853 CACNA2D4Q7Z3S7 1137 aa11.27□□□□□ -0.61
SPTAN1-228ENST00000635853 FERMT1Q9BQL6 677 aa11.27□□□□□ -0.61
SPTAN1-228ENST00000635853 INPP5BP32019 993 aa11.26□□□□□ -0.61
SPTAN1-228ENST00000635853 AFAP1L1Q8TED9 768 aa11.26□□□□□ -0.61
SPTAN1-228ENST00000635853 PUS7Q96PZ0 661 aaKnown RBP11.26□□□□□ -0.61
SPTAN1-228ENST00000635853 TUBBP07437 444 aa11.26□□□□□ -0.61
SPTAN1-228ENST00000635853 HMGB1P09429 215 aaKnown RBP11.26□□□□□ -0.61
SPTAN1-228ENST00000635853 B4GALNT4Q76KP1 1039 aa11.26□□□□□ -0.61
SPTAN1-228ENST00000635853 TRMT1LQ7Z2T5 733 aaKnown RBP11.26□□□□□ -0.61
SPTAN1-228ENST00000635853 RPAP2Q8IXW5 612 aaPredicted RBP11.26□□□□□ -0.61
SPTAN1-228ENST00000635853 JAKMIP1Q96N16 626 aaKnown RBP11.26□□□□□ -0.61
SPTAN1-228ENST00000635853 RAB34Q9BZG1 259 aa11.26□□□□□ -0.61
SPTAN1-228ENST00000635853 TMEM63CQ9P1W3 806 aa11.26□□□□□ -0.61
SPTAN1-228ENST00000635853 CEP83Q9Y592 693 aa11.26□□□□□ -0.61
SPTAN1-228ENST00000635853 C6orf229H3BNL8 230 aa11.26□□□□□ -0.61
SPTAN1-228ENST00000635853 CWC27Q6UX04 472 aaKnown RBP11.26□□□□□ -0.61
SPTAN1-228ENST00000635853 ZBTB9Q96C00 473 aa11.26□□□□□ -0.61
SPTAN1-228ENST00000635853 LIMCH1Q9UPQ0 1083 aa11.26□□□□□ -0.61
SPTAN1-228ENST00000635853 BLMP54132 1417 aaPredicted RBP11.26□□□□□ -0.61
SPTAN1-228ENST00000635853 SRGAP3O43295 1099 aa11.26□□□□□ -0.61
SPTAN1-228ENST00000635853 UBE4AQ14139 1066 aa11.26□□□□□ -0.61
SPTAN1-228ENST00000635853 MCTP2Q6DN12 878 aa11.26□□□□□ -0.61
SPTAN1-228ENST00000635853 CABP5Q9NP86 173 aa11.26□□□□□ -0.61
SPTAN1-228ENST00000635853 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.26□□□□□ -0.61
SPTAN1-228ENST00000635853 MORC2Q9Y6X9 1032 aaPredicted RBP11.26□□□□□ -0.61
SPTAN1-228ENST00000635853 SLC5A1P13866 664 aa11.25□□□□□ -0.61
SPTAN1-228ENST00000635853 EVCP57679 992 aa11.25□□□□□ -0.61
SPTAN1-228ENST00000635853 SMC1AQ14683 1233 aaKnown RBP11.25□□□□□ -0.61
SPTAN1-228ENST00000635853 CCDC12Q8WUD4 166 aaPredicted RBP11.25□□□□□ -0.61
SPTAN1-228ENST00000635853 RAD50Q92878 1312 aa11.25□□□□□ -0.61
SPTAN1-228ENST00000635853 FGD5Q6ZNL6 1462 aa11.25□□□□□ -0.61
SPTAN1-228ENST00000635853 KRT32Q14532 448 aa11.25□□□□□ -0.61
SPTAN1-228ENST00000635853 EFCAB13Q8IY85 973 aa11.25□□□□□ -0.61
SPTAN1-228ENST00000635853 LRRC45Q96CN5 670 aa11.25□□□□□ -0.61
SPTAN1-228ENST00000635853 INTS4Q96HW7 963 aaKnown RBP11.25□□□□□ -0.61
SPTAN1-228ENST00000635853 PUF60Q9UHX1 559 aaKnown RBP11.25□□□□□ -0.61
SPTAN1-228ENST00000635853 IGF1RP08069 1367 aa11.25□□□□□ -0.61
SPTAN1-228ENST00000635853 RTEL1-TNFRSF6BF6WH68 1400 aa11.25□□□□□ -0.61
SPTAN1-228ENST00000635853 RGS22Q8NE09 1264 aa11.25□□□□□ -0.61
SPTAN1-228ENST00000635853 SAMM50Q9Y512 469 aa11.25□□□□□ -0.61
SPTAN1-228ENST00000635853 RANBP6O60518 1105 aaKnown RBP11.25□□□□□ -0.61
SPTAN1-228ENST00000635853 BICD1Q96G01 975 aa11.25□□□□□ -0.61
SPTAN1-228ENST00000635853 OPA1O60313 960 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms