RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 RABL6Q3YEC7 729 aaPredicted RBP12.36□□□□□ -0.43
CACNA1A-216ENST00000635742 BMP2KLQ5H9B9 411 aa12.36□□□□□ -0.43
CACNA1A-216ENST00000635742 RHPN1Q8TCX5 695 aa12.36□□□□□ -0.43
CACNA1A-216ENST00000635742 IL1RAPL2Q9NP60 686 aa12.36□□□□□ -0.43
CACNA1A-216ENST00000635742 NOP58Q9Y2X3 529 aaKnown RBP12.36□□□□□ -0.43
CACNA1A-216ENST00000635742 GPTP24298 496 aa12.35□□□□□ -0.43
CACNA1A-216ENST00000635742 FOXO4P98177 505 aa12.35□□□□□ -0.43
CACNA1A-216ENST00000635742 TRIM28Q13263 835 aaKnown RBP12.35□□□□□ -0.43
CACNA1A-216ENST00000635742 SCN7AQ01118 1682 aa12.35□□□□□ -0.43
CACNA1A-216ENST00000635742 ERVV-1B6SEH8 477 aa12.35□□□□□ -0.43
CACNA1A-216ENST00000635742 TTC22Q5TAA0 569 aa12.35□□□□□ -0.43
CACNA1A-216ENST00000635742 ZNF772Q68DY9 489 aaPredicted RBP12.35□□□□□ -0.43
CACNA1A-216ENST00000635742 KLHDC4Q8TBB5 520 aa12.35□□□□□ -0.43
CACNA1A-216ENST00000635742 CNTNAP4Q9C0A0 1308 aa12.35□□□□□ -0.43
CACNA1A-216ENST00000635742 CAMTA2O94983 1202 aa12.34□□□□□ -0.43
CACNA1A-216ENST00000635742 RFX5P48382 616 aaPredicted RBP12.34□□□□□ -0.43
CACNA1A-216ENST00000635742 HSP90AB3PQ58FF7 597 aa12.34□□□□□ -0.43
CACNA1A-216ENST00000635742 KRT27Q7Z3Y8 459 aa12.34□□□□□ -0.43
CACNA1A-216ENST00000635742 NPM2Q86SE8 214 aaKnown RBP12.34□□□□□ -0.43
CACNA1A-216ENST00000635742 NLRP10Q86W26 655 aa12.34□□□□□ -0.43
CACNA1A-216ENST00000635742 KIF1BPQ96EK5 621 aa12.34□□□□□ -0.43
CACNA1A-216ENST00000635742 UBN2Q6ZU65 1347 aa12.34□□□□□ -0.43
CACNA1A-216ENST00000635742 PDE1AP54750 535 aa12.33□□□□□ -0.44
CACNA1A-216ENST00000635742 OS9Q13438 667 aaPredicted RBP12.33□□□□□ -0.44
CACNA1A-216ENST00000635742 HSP90AB4PQ58FF6 505 aa12.33□□□□□ -0.44
CACNA1A-216ENST00000635742 TSHZ3Q63HK5 1081 aa12.33□□□□□ -0.44
CACNA1A-216ENST00000635742 LMBR1LQ6UX01 489 aa12.33□□□□□ -0.44
CACNA1A-216ENST00000635742 CCNL1Q9UK58 526 aaPredicted RBP12.33□□□□□ -0.44
CACNA1A-216ENST00000635742 TAOK2Q9UL54 1235 aa12.33□□□□□ -0.44
CACNA1A-216ENST00000635742 C4BP0C0L5 1744 aa12.33□□□□□ -0.44
CACNA1A-216ENST00000635742 PCCAP05165 728 aaPredicted RBP12.33□□□□□ -0.44
CACNA1A-216ENST00000635742 MX1P20591 662 aa12.33□□□□□ -0.44
CACNA1A-216ENST00000635742 RBM6P78332 1123 aaKnown RBP12.33□□□□□ -0.44
CACNA1A-216ENST00000635742 BCL11BQ9C0K0 894 aaPredicted RBP12.33□□□□□ -0.44
CACNA1A-216ENST00000635742 SIL1Q9H173 461 aa12.33□□□□□ -0.44
CACNA1A-216ENST00000635742 OSBPL3Q9H4L5 887 aa12.33□□□□□ -0.44
CACNA1A-216ENST00000635742 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.33□□□□□ -0.44
CACNA1A-216ENST00000635742 MYH3P11055 1940 aa12.32□□□□□ -0.44
CACNA1A-216ENST00000635742 SMIM5Q71RC9 77 aa12.32□□□□□ -0.44
CACNA1A-216ENST00000635742 NUTM1Q86Y26 1132 aa12.32□□□□□ -0.44
CACNA1A-216ENST00000635742 ZNF34Q8IZ26 560 aa12.32□□□□□ -0.44
CACNA1A-216ENST00000635742 ZBTB38Q8NAP3 1195 aaPredicted RBP12.32□□□□□ -0.44
CACNA1A-216ENST00000635742 FAM89AQ96GI7 184 aa12.32□□□□□ -0.44
CACNA1A-216ENST00000635742 C4AP0C0L4 1744 aa12.32□□□□□ -0.44
CACNA1A-216ENST00000635742 SASH1O94885 1247 aa12.31□□□□□ -0.44
CACNA1A-216ENST00000635742 PTPN12Q05209 780 aaKnown RBP12.31□□□□□ -0.44
CACNA1A-216ENST00000635742 SYNE4Q8N205 404 aa12.31□□□□□ -0.44
CACNA1A-216ENST00000635742 COPRSQ9NQ92 184 aa12.31□□□□□ -0.44
CACNA1A-216ENST00000635742 LAMB2P55268 1798 aa12.31□□□□□ -0.44
CACNA1A-216ENST00000635742 CDHR2Q9BYE9 1310 aa12.31□□□□□ -0.44
CACNA1A-216ENST00000635742 FAM196AQ6ZSG2 479 aa12.31□□□□□ -0.44
CACNA1A-216ENST00000635742 ERC1Q8IUD2 1116 aa12.31□□□□□ -0.44
CACNA1A-216ENST00000635742 CHMP3Q9Y3E7 222 aa12.31□□□□□ -0.44
CACNA1A-216ENST00000635742 DDX60Q8IY21 1712 aaKnown RBP12.3□□□□□ -0.44
CACNA1A-216ENST00000635742 G3BP1Q13283 466 aaKnown RBP eCLIP12.3□□□□□ -0.44
CACNA1A-216ENST00000635742 RC3H1Q5TC82 1133 aaKnown RBP12.3□□□□□ -0.44
CACNA1A-216ENST00000635742 PLA2G12BQ9BX93 195 aa12.3□□□□□ -0.44
CACNA1A-216ENST00000635742 STAP2Q9UGK3 403 aa12.3□□□□□ -0.44
CACNA1A-216ENST00000635742 SDSP20132 328 aa12.29□□□□□ -0.44
CACNA1A-216ENST00000635742 AMIGO3Q86WK7 504 aa12.29□□□□□ -0.44
CACNA1A-216ENST00000635742 AOX1Q06278 1338 aa12.29□□□□□ -0.44
CACNA1A-216ENST00000635742 GNPATO15228 680 aa12.29□□□□□ -0.44
CACNA1A-216ENST00000635742 CDC45O75419 566 aa12.29□□□□□ -0.44
CACNA1A-216ENST00000635742 TRIM37O94972 964 aa12.29□□□□□ -0.44
CACNA1A-216ENST00000635742 ANP32AP39687 249 aaKnown RBP12.29□□□□□ -0.44
CACNA1A-216ENST00000635742 TBC1D9Q6ZT07 1266 aa12.29□□□□□ -0.44
CACNA1A-216ENST00000635742 LRRC4BQ9NT99 713 aa12.29□□□□□ -0.44
CACNA1A-216ENST00000635742 PODXL2Q9NZ53 605 aa12.29□□□□□ -0.44
CACNA1A-216ENST00000635742 TRMT112Q9UI30 125 aaKnown RBP12.29□□□□□ -0.44
CACNA1A-216ENST00000635742 UBR3Q6ZT12 1888 aa12.28□□□□□ -0.44
CACNA1A-216ENST00000635742 RPS6KA4O75676 772 aa12.28□□□□□ -0.44
CACNA1A-216ENST00000635742 MFAP1P55081 439 aaKnown RBP12.28□□□□□ -0.44
CACNA1A-216ENST00000635742 SUSD4Q5VX71 490 aa12.28□□□□□ -0.44
CACNA1A-216ENST00000635742 CLASRPQ8N2M8 674 aaKnown RBP12.28□□□□□ -0.44
CACNA1A-216ENST00000635742 RGS17Q9UGC6 210 aaPredicted RBP12.28□□□□□ -0.44
CACNA1A-216ENST00000635742 AK9Q5TCS8 1911 aa12.28□□□□□ -0.44
CACNA1A-216ENST00000635742 COL24A1Q17RW2 1714 aa12.28□□□□□ -0.44
CACNA1A-216ENST00000635742 USP42Q9H9J4 1324 aaKnown RBP12.28□□□□□ -0.44
CACNA1A-216ENST00000635742 CASZ1Q86V15 1759 aa12.27□□□□□ -0.44
CACNA1A-216ENST00000635742 AACSQ86V21 672 aa12.27□□□□□ -0.44
CACNA1A-216ENST00000635742 PI4K2BQ8TCG2 481 aa12.27□□□□□ -0.44
CACNA1A-216ENST00000635742 EAF2Q96CJ1 260 aaPredicted RBP12.27□□□□□ -0.44
CACNA1A-216ENST00000635742 ZNF594Q96JF6 807 aaPredicted RBP12.27□□□□□ -0.44
CACNA1A-216ENST00000635742 CCDC85AQ96PX6 553 aaPredicted RBP12.27□□□□□ -0.44
CACNA1A-216ENST00000635742 NIP7Q9Y221 180 aaKnown RBP eCLIP12.27□□□□□ -0.44
CACNA1A-216ENST00000635742 LRP5O75197 1615 aa12.27□□□□□ -0.45
CACNA1A-216ENST00000635742 FAM177BA6PVY3 158 aa12.27□□□□□ -0.45
CACNA1A-216ENST00000635742 IRS4O14654 1257 aaPredicted RBP12.27□□□□□ -0.45
CACNA1A-216ENST00000635742 CSF1RP07333 972 aa12.27□□□□□ -0.45
CACNA1A-216ENST00000635742 RXRBP28702 533 aa12.27□□□□□ -0.45
CACNA1A-216ENST00000635742 FBXO41Q8TF61 875 aa12.27□□□□□ -0.45
CACNA1A-216ENST00000635742 BCL2L12Q9HB09 334 aa12.27□□□□□ -0.45
CACNA1A-216ENST00000635742 TLR7Q9NYK1 1049 aaKnown RBP12.27□□□□□ -0.45
CACNA1A-216ENST00000635742 SRP68Q9UHB9 627 aaKnown RBP12.27□□□□□ -0.45
CACNA1A-216ENST00000635742 NTSR2O95665 410 aa12.26□□□□□ -0.45
CACNA1A-216ENST00000635742 CTSWP56202 376 aa12.26□□□□□ -0.45
CACNA1A-216ENST00000635742 TFCP2Q12800 502 aa12.26□□□□□ -0.45
CACNA1A-216ENST00000635742 PARP10Q53GL7 1025 aa12.26□□□□□ -0.45
CACNA1A-216ENST00000635742 ATG9AQ7Z3C6 839 aa12.26□□□□□ -0.45
CACNA1A-216ENST00000635742 ZNF652Q9Y2D9 606 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms