RNA–Protein interactions for RNA: ENST00000635248.1

RABGAP1L-222, Transcript of RAB GTPase activating protein 1 like, human

TSL 5

Gene RABGAP1L, Length 3,074 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RABGAP1L-222	ENST00000635248	TXNRD1	Q16881	649 aa		13.29	□□□□□ -0.28
RABGAP1L-222	ENST00000635248	USPL1	Q5W0Q7	1092 aa		13.29	□□□□□ -0.28
RABGAP1L-222	ENST00000635248	PROM2	Q8N271	834 aa		13.29	□□□□□ -0.28
RABGAP1L-222	ENST00000635248	SBF2	Q86WG5	1849 aa		13.29	□□□□□ -0.28
RABGAP1L-222	ENST00000635248	ERVV-1	B6SEH8	477 aa		13.28	□□□□□ -0.28
RABGAP1L-222	ENST00000635248	RPS6KA4	O75676	772 aa		13.28	□□□□□ -0.28
RABGAP1L-222	ENST00000635248	CASP7	P55210	303 aa		13.28	□□□□□ -0.28
RABGAP1L-222	ENST00000635248	HSP90AB3P	Q58FF7	597 aa		13.28	□□□□□ -0.28
RABGAP1L-222	ENST00000635248	UBN2	Q6ZU65	1347 aa		13.28	□□□□□ -0.28
RABGAP1L-222	ENST00000635248	NHS	Q6T4R5	1651 aa		13.28	□□□□□ -0.28
RABGAP1L-222	ENST00000635248	POLA2	Q14181	598 aa		13.28	□□□□□ -0.28
RABGAP1L-222	ENST00000635248	ARHGEF1	Q92888	912 aa	Known RBP	13.28	□□□□□ -0.28
RABGAP1L-222	ENST00000635248	SUSD4	Q5VX71	490 aa		13.28	□□□□□ -0.28
RABGAP1L-222	ENST00000635248	CNTNAP4	Q9C0A0	1308 aa		13.27	□□□□□ -0.28
RABGAP1L-222	ENST00000635248	ZPR1	O75312	459 aa		13.27	□□□□□ -0.28
RABGAP1L-222	ENST00000635248	TSHZ3	Q63HK5	1081 aa		13.27	□□□□□ -0.28
RABGAP1L-222	ENST00000635248	NUTM1	Q86Y26	1132 aa		13.27	□□□□□ -0.28
RABGAP1L-222	ENST00000635248	LRRCC1	Q9C099	1032 aa		13.27	□□□□□ -0.28
RABGAP1L-222	ENST00000635248	CCDC24	Q8N4L8	307 aa		13.27	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	AFDN	P55196	1824 aa	Known RBP	13.27	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	HCLS1	P14317	486 aa	Predicted RBP	13.26	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	RFC4	P35249	363 aa		13.26	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	FOXO4	P98177	505 aa		13.26	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	TRIM28	Q13263	835 aa	Known RBP	13.26	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	TRAPPC3L	Q5T215	181 aa		13.26	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	RC3H1	Q5TC82	1133 aa	Known RBP	13.26	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.26	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	ILDR1	Q86SU0	546 aa	Predicted RBP	13.26	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	ZNF34	Q8IZ26	560 aa		13.26	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	ZNF594	Q96JF6	807 aa	Predicted RBP	13.26	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.26	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	IRS4	O14654	1257 aa	Predicted RBP	13.26	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	MSH5	O43196	834 aa		13.26	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	MTX1	Q13505	466 aa		13.26	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	PCCA	P05165	728 aa	Predicted RBP	13.25	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.25	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	RHPN1	Q8TCX5	695 aa		13.25	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	GTF2E1	P29083	439 aa	Predicted RBP	13.25	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	TBC1D9B	Q66K14	1250 aa		13.25	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	ZNF652	Q9Y2D9	606 aa		13.25	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.24	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	EN1	Q05925	392 aa	Predicted RBP	13.24	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	PLEKHM2	Q8IWE5	1019 aa		13.24	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	BCL2L12	Q9HB09	334 aa		13.24	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	NARF	Q9UHQ1	456 aa		13.24	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.24	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	NUP188	Q5SRE5	1749 aa		13.24	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.24	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	FAM161A	Q3B820	660 aa		13.24	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	SLC27A3	Q5K4L6	730 aa		13.24	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	UTP14A	Q9BVJ6	771 aa	Known RBP	13.24	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	TFCP2L1	Q9NZI6	479 aa		13.24	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	NPHP1	O15259	732 aa		13.23	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	PTPN12	Q05209	780 aa	Known RBP	13.23	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	RABL6	Q3YEC7	729 aa	Predicted RBP	13.23	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	NUP98	P52948	1817 aa		13.22	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	CCDC57	Q2TAC2	916 aa		13.22	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	KIF1BP	Q96EK5	621 aa		13.22	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	RBM19	Q9Y4C8	960 aa	Known RBP	13.22	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	TAF7L	Q5H9L4	462 aa		13.22	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	SETDB2	Q96T68	719 aa		13.22	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	BACH2	Q9BYV9	841 aa		13.22	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	SH3TC1	Q8TE82	1336 aa		13.22	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	PLSCR1	O15162	318 aa		13.21	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	RAB11FIP3	O75154	756 aa		13.21	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	SASH1	O94885	1247 aa		13.21	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	RFX5	P48382	616 aa	Predicted RBP	13.21	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	EZH2	Q15910	746 aa	Known RBP	13.21	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	HSP90AB4P	Q58FF6	505 aa		13.21	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	PUS3	Q9BZE2	481 aa	Known RBP	13.21	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	GREM2	Q9H772	168 aa		13.21	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	NOP58	Q9Y2X3	529 aa	Known RBP	13.21	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	C8orf34	Q49A92	452 aa		13.21	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	CLEC4G	Q6UXB4	293 aa		13.21	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	DEFB132	Q7Z7B7	95 aa		13.21	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.21	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	COL5A3	P25940	1745 aa	Predicted RBP	13.21	□□□□□ -0.29
RABGAP1L-222	ENST00000635248	ZNF827	Q17R98	1081 aa		13.21	□□□□□ -0.3
RABGAP1L-222	ENST00000635248	LRRC24	Q50LG9	513 aa		13.21	□□□□□ -0.3
RABGAP1L-222	ENST00000635248	PARP10	Q53GL7	1025 aa		13.21	□□□□□ -0.3
RABGAP1L-222	ENST00000635248	TTLL11	Q8NHH1	800 aa		13.21	□□□□□ -0.3
RABGAP1L-222	ENST00000635248	ERFE	Q4G0M1	354 aa		13.2	□□□□□ -0.3
RABGAP1L-222	ENST00000635248	CLASRP	Q8N2M8	674 aa	Known RBP	13.2	□□□□□ -0.3
RABGAP1L-222	ENST00000635248	IFIT5	Q13325	482 aa	Known RBP	13.2	□□□□□ -0.3
RABGAP1L-222	ENST00000635248	AACS	Q86V21	672 aa		13.2	□□□□□ -0.3
RABGAP1L-222	ENST00000635248	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.2	□□□□□ -0.3
RABGAP1L-222	ENST00000635248	PDE8A	O60658	829 aa		13.19	□□□□□ -0.3
RABGAP1L-222	ENST00000635248	NTSR2	O95665	410 aa		13.19	□□□□□ -0.3
RABGAP1L-222	ENST00000635248	ITGA6	P23229	1130 aa		13.19	□□□□□ -0.3
RABGAP1L-222	ENST00000635248	PDE1A	P54750	535 aa		13.19	□□□□□ -0.3
RABGAP1L-222	ENST00000635248	CTSW	P56202	376 aa		13.19	□□□□□ -0.3
RABGAP1L-222	ENST00000635248	TFCP2	Q12800	502 aa		13.19	□□□□□ -0.3
RABGAP1L-222	ENST00000635248	COPRS	Q9NQ92	184 aa		13.19	□□□□□ -0.3
RABGAP1L-222	ENST00000635248	USP42	Q9H9J4	1324 aa	Known RBP	13.19	□□□□□ -0.3
RABGAP1L-222	ENST00000635248	LY75	O60449	1722 aa		13.19	□□□□□ -0.3
RABGAP1L-222	ENST00000635248	MAP4K4	O95819	1239 aa	Predicted RBP	13.19	□□□□□ -0.3
RABGAP1L-222	ENST00000635248	MX1	P20591	662 aa		13.19	□□□□□ -0.3
RABGAP1L-222	ENST00000635248	SEC24B	O95487	1268 aa		13.19	□□□□□ -0.3
RABGAP1L-222	ENST00000635248	GSPT1	P15170	499 aa	Known RBP	13.19	□□□□□ -0.3
RABGAP1L-222	ENST00000635248	C4B	P0C0L5	1744 aa		13.18	□□□□□ -0.3

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