RNA–Protein interactions for RNA: ENST00000629136.1

CHD2-217, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-217ENST00000629136 CCDC27Q2M243 656 aa14.01□□□□□ -0.17
CHD2-217ENST00000629136 PARP10Q53GL7 1025 aa14.01□□□□□ -0.17
CHD2-217ENST00000629136 PPP1R42Q7Z4L9 355 aa14□□□□□ -0.17
CHD2-217ENST00000629136 DBF4Q9UBU7 674 aaPredicted RBP14□□□□□ -0.17
CHD2-217ENST00000629136 MYH3P11055 1940 aa14□□□□□ -0.17
CHD2-217ENST00000629136 COL4A1P02462 1669 aa13.99□□□□□ -0.17
CHD2-217ENST00000629136 SOGA3Q5TF21 947 aa13.99□□□□□ -0.17
CHD2-217ENST00000629136 OLFM4Q6UX06 510 aa13.99□□□□□ -0.17
CHD2-217ENST00000629136 C3orf67Q6ZVT6 689 aa13.99□□□□□ -0.17
CHD2-217ENST00000629136 WWC1Q8IX03 1113 aa13.99□□□□□ -0.17
CHD2-217ENST00000629136 TAOK3Q9H2K8 898 aa13.99□□□□□ -0.17
CHD2-217ENST00000629136 SCN4AP35499 1836 aa13.99□□□□□ -0.17
CHD2-217ENST00000629136 COL4A5P29400 1685 aa13.98□□□□□ -0.17
CHD2-217ENST00000629136 RNF123Q5XPI4 1314 aa13.98□□□□□ -0.17
CHD2-217ENST00000629136 KDM2BQ8NHM5 1336 aa13.98□□□□□ -0.17
CHD2-217ENST00000629136 CCDC93Q567U6 631 aa13.98□□□□□ -0.17
CHD2-217ENST00000629136 HSP90AB3PQ58FF7 597 aa13.98□□□□□ -0.17
CHD2-217ENST00000629136 NLRP10Q86W26 655 aa13.98□□□□□ -0.17
CHD2-217ENST00000629136 C8orf58Q8NAV2 365 aa13.98□□□□□ -0.17
CHD2-217ENST00000629136 TSR2Q969E8 191 aaKnown RBP13.98□□□□□ -0.17
CHD2-217ENST00000629136 ELL2O00472 640 aaPredicted RBP13.97□□□□□ -0.17
CHD2-217ENST00000629136 ALDH1B1P30837 517 aa13.97□□□□□ -0.17
CHD2-217ENST00000629136 HOXA10P31260 410 aaPredicted RBP13.97□□□□□ -0.17
CHD2-217ENST00000629136 TCIRG1Q13488 830 aa13.97□□□□□ -0.17
CHD2-217ENST00000629136 NCBP3Q53F19 620 aaKnown RBP13.97□□□□□ -0.17
CHD2-217ENST00000629136 SLC51AQ86UW1 340 aa13.97□□□□□ -0.17
CHD2-217ENST00000629136 PLBD2Q8NHP8 589 aa13.97□□□□□ -0.17
CHD2-217ENST00000629136 UTP14AQ9BVJ6 771 aaKnown RBP13.97□□□□□ -0.17
CHD2-217ENST00000629136 HYPKQ9NX55 129 aa13.97□□□□□ -0.17
CHD2-217ENST00000629136 LTBP1Q14766 1721 aa13.96□□□□□ -0.17
CHD2-217ENST00000629136 CEP350Q5VT06 3117 aa13.96□□□□□ -0.17
CHD2-217ENST00000629136 GLTPD2A6NH11 291 aa13.96□□□□□ -0.17
CHD2-217ENST00000629136 ANKRD13DQ6ZTN6 518 aa13.96□□□□□ -0.17
CHD2-217ENST00000629136 TSPYL6Q8N831 410 aa13.96□□□□□ -0.17
CHD2-217ENST00000629136 RPGRQ92834 1020 aaKnown RBP13.96□□□□□ -0.17
CHD2-217ENST00000629136 PHAXQ9H814 394 aaKnown RBP13.96□□□□□ -0.17
CHD2-217ENST00000629136 SPEF2Q9C093 1822 aa13.96□□□□□ -0.17
CHD2-217ENST00000629136 IL16Q14005 1332 aa13.95□□□□□ -0.18
CHD2-217ENST00000629136 TOMM70O94826 608 aa13.95□□□□□ -0.18
CHD2-217ENST00000629136 FKBP4Q02790 459 aaKnown RBP eCLIP13.95□□□□□ -0.18
CHD2-217ENST00000629136 SLC10A5Q5PT55 438 aa13.95□□□□□ -0.18
CHD2-217ENST00000629136 SYNE4Q8N205 404 aa13.95□□□□□ -0.18
CHD2-217ENST00000629136 ISCA1Q9BUE6 129 aa13.95□□□□□ -0.18
CHD2-217ENST00000629136 RRAGCQ9HB90 399 aa13.95□□□□□ -0.18
CHD2-217ENST00000629136 DUOX1Q9NRD9 1551 aa13.95□□□□□ -0.18
CHD2-217ENST00000629136 ZNF428Q96B54 188 aa13.94□□□□□ -0.18
CHD2-217ENST00000629136 NLRP3Q96P20 1036 aa13.94□□□□□ -0.18
CHD2-217ENST00000629136 TRMT112Q9UI30 125 aaKnown RBP13.94□□□□□ -0.18
CHD2-217ENST00000629136 ADAMTSL1Q8N6G6 1762 aa13.94□□□□□ -0.18
CHD2-217ENST00000629136 ABCC4O15439 1325 aa13.93□□□□□ -0.18
CHD2-217ENST00000629136 SH3TC1Q8TE82 1336 aa13.93□□□□□ -0.18
CHD2-217ENST00000629136 ATP5J2-PTCD1G3V325 749 aa13.93□□□□□ -0.18
CHD2-217ENST00000629136 HCLS1P14317 486 aaPredicted RBP13.93□□□□□ -0.18
CHD2-217ENST00000629136 HSPA6P17066 643 aa13.93□□□□□ -0.18
CHD2-217ENST00000629136 RBM17Q96I25 401 aaKnown RBP13.93□□□□□ -0.18
CHD2-217ENST00000629136 CRAMP1Q96RY5 1269 aa13.93□□□□□ -0.18
CHD2-217ENST00000629136 ZNF277Q9NRM2 450 aaPredicted RBP13.93□□□□□ -0.18
CHD2-217ENST00000629136 FANCIQ9NVI1 1328 aa13.92□□□□□ -0.18
CHD2-217ENST00000629136 POTECB2RU33 542 aa13.92□□□□□ -0.18
CHD2-217ENST00000629136 PPEF1O14829 653 aaPredicted RBP13.92□□□□□ -0.18
CHD2-217ENST00000629136 CCDC30Q5VVM6 783 aa13.92□□□□□ -0.18
CHD2-217ENST00000629136 RTKN2Q8IZC4 609 aa13.92□□□□□ -0.18
CHD2-217ENST00000629136 FAM9BQ8IZU0 186 aa13.92□□□□□ -0.18
CHD2-217ENST00000629136 RBM46Q8TBY0 533 aaKnown RBP13.92□□□□□ -0.18
CHD2-217ENST00000629136 PSMD1Q99460 953 aa13.92□□□□□ -0.18
CHD2-217ENST00000629136 GOLGA2Q08379 1002 aa13.91□□□□□ -0.18
CHD2-217ENST00000629136 TWISTNBQ3B726 338 aaPredicted RBP13.91□□□□□ -0.18
CHD2-217ENST00000629136 RIC3Q7Z5B4 369 aa13.91□□□□□ -0.18
CHD2-217ENST00000629136 SALL2Q9Y467 1007 aaPredicted RBP13.91□□□□□ -0.18
CHD2-217ENST00000629136 IARSP41252 1262 aaKnown RBP13.9□□□□□ -0.18
CHD2-217ENST00000629136 TRIM28Q13263 835 aaKnown RBP13.9□□□□□ -0.18
CHD2-217ENST00000629136 CC2D2BQ6DHV5 1058 aa13.9□□□□□ -0.18
CHD2-217ENST00000629136 DPY19L2Q6NUT2 758 aa13.9□□□□□ -0.18
CHD2-217ENST00000629136 C16orf71Q8IYS4 520 aaPredicted RBP13.9□□□□□ -0.18
CHD2-217ENST00000629136 FAM89AQ96GI7 184 aa13.9□□□□□ -0.18
CHD2-217ENST00000629136 ZNF541Q9H0D2 1346 aa13.9□□□□□ -0.19
CHD2-217ENST00000629136 TCERG1O14776 1098 aaKnown RBP13.89□□□□□ -0.19
CHD2-217ENST00000629136 DDNO94850 711 aaPredicted RBP13.89□□□□□ -0.19
CHD2-217ENST00000629136 WDR63Q8IWG1 891 aa13.89□□□□□ -0.19
CHD2-217ENST00000629136 MYD88Q99836 296 aa13.89□□□□□ -0.19
CHD2-217ENST00000629136 SPINK5Q9NQ38 1064 aaPredicted RBP13.89□□□□□ -0.19
CHD2-217ENST00000629136 A0A1B0GUL6 1792 aa13.88□□□□□ -0.19
CHD2-217ENST00000629136 VEGFAP15692 232 aaPredicted RBP13.88□□□□□ -0.19
CHD2-217ENST00000629136 GRAPQ13588 217 aa13.88□□□□□ -0.19
CHD2-217ENST00000629136 RTL5Q5HYW3 569 aaPredicted RBP13.88□□□□□ -0.19
CHD2-217ENST00000629136 GRAPLQ8TC17 118 aaPredicted RBP13.88□□□□□ -0.19
CHD2-217ENST00000629136 METTL22Q9BUU2 404 aaPredicted RBP13.88□□□□□ -0.19
CHD2-217ENST00000629136 CHMP4AQ9BY43 222 aa13.88□□□□□ -0.19
CHD2-217ENST00000629136 ATP6V0A2Q9Y487 856 aa13.88□□□□□ -0.19
CHD2-217ENST00000629136 PSME4Q14997 1843 aa13.87□□□□□ -0.19
CHD2-217ENST00000629136 FZD9O00144 591 aa13.87□□□□□ -0.19
CHD2-217ENST00000629136 FSTL1Q12841 308 aa13.87□□□□□ -0.19
CHD2-217ENST00000629136 DDX46Q7L014 1031 aaKnown RBP13.87□□□□□ -0.19
CHD2-217ENST00000629136 G2E3Q7L622 706 aa13.87□□□□□ -0.19
CHD2-217ENST00000629136 STK31Q9BXU1 1019 aa13.87□□□□□ -0.19
CHD2-217ENST00000629136 MAP3K2Q9Y2U5 619 aa13.87□□□□□ -0.19
CHD2-217ENST00000629136 ZNF521Q96K83 1311 aa13.87□□□□□ -0.19
CHD2-217ENST00000629136 IRS4O14654 1257 aaPredicted RBP13.86□□□□□ -0.19
CHD2-217ENST00000629136 DDX58O95786 925 aaKnown RBP13.86□□□□□ -0.19
CHD2-217ENST00000629136 SF3B3Q15393 1217 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms