RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 AIMP1Q12904 312 aaKnown RBP12.54□□□□□ -0.4
SOX2-OT-249ENST00000628810 USPL1Q5W0Q7 1092 aa12.54□□□□□ -0.4
SOX2-OT-249ENST00000628810 PI4KAP1Q8N8J0 262 aa12.54□□□□□ -0.4
SOX2-OT-249ENST00000628810 SLC16A10Q8TF71 515 aa12.54□□□□□ -0.4
SOX2-OT-249ENST00000628810 API5Q9BZZ5 524 aaKnown RBP12.54□□□□□ -0.4
SOX2-OT-249ENST00000628810 ZBTB3Q9H5J0 574 aa12.54□□□□□ -0.4
SOX2-OT-249ENST00000628810 SRP68Q9UHB9 627 aaKnown RBP12.54□□□□□ -0.4
SOX2-OT-249ENST00000628810 ZNF652Q9Y2D9 606 aa12.54□□□□□ -0.4
SOX2-OT-249ENST00000628810 ABCC4O15439 1325 aa12.54□□□□□ -0.4
SOX2-OT-249ENST00000628810 ATMINO43313 823 aaPredicted RBP12.53□□□□□ -0.4
SOX2-OT-249ENST00000628810 ZPR1O75312 459 aa12.53□□□□□ -0.4
SOX2-OT-249ENST00000628810 TRIM27P14373 513 aa12.53□□□□□ -0.4
SOX2-OT-249ENST00000628810 R3HDM1Q15032 1099 aaKnown RBP12.53□□□□□ -0.4
SOX2-OT-249ENST00000628810 HLFQ16534 295 aa12.53□□□□□ -0.4
SOX2-OT-249ENST00000628810 ZKSCAN2Q63HK3 967 aa12.53□□□□□ -0.4
SOX2-OT-249ENST00000628810 ATF7IPQ6VMQ6 1270 aa12.53□□□□□ -0.4
SOX2-OT-249ENST00000628810 DNAAF4Q8WXU2 420 aa12.53□□□□□ -0.4
SOX2-OT-249ENST00000628810 NRXN2Q9P2S2 1712 aa12.53□□□□□ -0.4
SOX2-OT-249ENST00000628810 CENPBP07199 599 aaPredicted RBP12.52□□□□□ -0.41
SOX2-OT-249ENST00000628810 HSP90AB3PQ58FF7 597 aa12.52□□□□□ -0.41
SOX2-OT-249ENST00000628810 RIC3Q7Z5B4 369 aa12.52□□□□□ -0.41
SOX2-OT-249ENST00000628810 METTL22Q9BUU2 404 aaPredicted RBP12.52□□□□□ -0.41
SOX2-OT-249ENST00000628810 MAP3K2Q9Y2U5 619 aa12.52□□□□□ -0.41
SOX2-OT-249ENST00000628810 RRP1P56182 461 aaKnown RBP12.51□□□□□ -0.41
SOX2-OT-249ENST00000628810 TRIM28Q13263 835 aaKnown RBP12.51□□□□□ -0.41
SOX2-OT-249ENST00000628810 TCIRG1Q13488 830 aa12.51□□□□□ -0.41
SOX2-OT-249ENST00000628810 ZNF34Q8IZ26 560 aa12.51□□□□□ -0.41
SOX2-OT-249ENST00000628810 NLGN1Q8N2Q7 840 aa12.51□□□□□ -0.41
SOX2-OT-249ENST00000628810 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.51□□□□□ -0.41
SOX2-OT-249ENST00000628810 SLC39A7Q92504 469 aa12.51□□□□□ -0.41
SOX2-OT-249ENST00000628810 ISCA1Q9BUE6 129 aa12.51□□□□□ -0.41
SOX2-OT-249ENST00000628810 PDGFDQ9GZP0 370 aaPredicted RBP12.51□□□□□ -0.41
SOX2-OT-249ENST00000628810 AFDNP55196 1824 aaKnown RBP12.51□□□□□ -0.41
SOX2-OT-249ENST00000628810 F6X3S4 739 aa12.5□□□□□ -0.41
SOX2-OT-249ENST00000628810 BEND3Q5T5X7 828 aa12.5□□□□□ -0.41
SOX2-OT-249ENST00000628810 DCAF8Q5TAQ9 597 aa12.5□□□□□ -0.41
SOX2-OT-249ENST00000628810 FRAT1Q92837 279 aaPredicted RBP12.5□□□□□ -0.41
SOX2-OT-249ENST00000628810 UBN2Q6ZU65 1347 aa12.5□□□□□ -0.41
SOX2-OT-249ENST00000628810 CARMIL3Q8ND23 1372 aa12.5□□□□□ -0.41
SOX2-OT-249ENST00000628810 LAMB2P55268 1798 aa12.5□□□□□ -0.41
SOX2-OT-249ENST00000628810 IGKV5-2P06315 115 aa12.49□□□□□ -0.41
SOX2-OT-249ENST00000628810 C7P10643 843 aa12.49□□□□□ -0.41
SOX2-OT-249ENST00000628810 MS4A1P11836 297 aa12.49□□□□□ -0.41
SOX2-OT-249ENST00000628810 TM4SF1P30408 202 aa12.49□□□□□ -0.41
SOX2-OT-249ENST00000628810 TIE1P35590 1138 aa12.49□□□□□ -0.41
SOX2-OT-249ENST00000628810 NEXNQ0ZGT2 675 aa12.49□□□□□ -0.41
SOX2-OT-249ENST00000628810 PDE3AQ14432 1141 aa12.49□□□□□ -0.41
SOX2-OT-249ENST00000628810 PARP10Q53GL7 1025 aa12.49□□□□□ -0.41
SOX2-OT-249ENST00000628810 TBC1D9BQ66K14 1250 aa12.49□□□□□ -0.41
SOX2-OT-249ENST00000628810 INTS3Q68E01 1043 aaKnown RBP12.49□□□□□ -0.41
SOX2-OT-249ENST00000628810 LINS1Q8NG48 757 aa12.49□□□□□ -0.41
SOX2-OT-249ENST00000628810 ARXQ96QS3 562 aa12.49□□□□□ -0.41
SOX2-OT-249ENST00000628810 MTFR1LQ9H019 292 aa12.49□□□□□ -0.41
SOX2-OT-249ENST00000628810 PCDHB13Q9Y5F0 798 aa12.49□□□□□ -0.41
SOX2-OT-249ENST00000628810 RIC1Q4ADV7 1423 aa12.48□□□□□ -0.41
SOX2-OT-249ENST00000628810 PSDA5PKW4 1024 aaPredicted RBP12.48□□□□□ -0.41
SOX2-OT-249ENST00000628810 NEURL1BA8MQ27 555 aa12.48□□□□□ -0.41
SOX2-OT-249ENST00000628810 ALDH1L1O75891 902 aa12.48□□□□□ -0.41
SOX2-OT-249ENST00000628810 CCT4P50991 539 aaKnown RBP12.48□□□□□ -0.41
SOX2-OT-249ENST00000628810 NFIXQ14938 502 aa12.48□□□□□ -0.41
SOX2-OT-249ENST00000628810 NLRP10Q86W26 655 aa12.48□□□□□ -0.41
SOX2-OT-249ENST00000628810 DZIP1LQ8IYY4 767 aaKnown RBP12.48□□□□□ -0.41
SOX2-OT-249ENST00000628810 PELP1Q8IZL8 1130 aaKnown RBP12.48□□□□□ -0.41
SOX2-OT-249ENST00000628810 CCDC191Q8NCU4 936 aa12.48□□□□□ -0.41
SOX2-OT-249ENST00000628810 MYD88Q99836 296 aa12.48□□□□□ -0.41
SOX2-OT-249ENST00000628810 TNNQ9UQP3 1299 aa12.48□□□□□ -0.41
SOX2-OT-249ENST00000628810 NIP7Q9Y221 180 aaKnown RBP eCLIP12.48□□□□□ -0.41
SOX2-OT-249ENST00000628810 POLRMTO00411 1230 aaKnown RBP12.47□□□□□ -0.41
SOX2-OT-249ENST00000628810 RLBP1P12271 317 aa12.47□□□□□ -0.41
SOX2-OT-249ENST00000628810 DDR1Q08345 913 aa12.47□□□□□ -0.41
SOX2-OT-249ENST00000628810 SRCIN1Q9C0H9 1055 aa12.47□□□□□ -0.41
SOX2-OT-249ENST00000628810 UTYO14607 1347 aa12.46□□□□□ -0.41
SOX2-OT-249ENST00000628810 PLIN1O60240 522 aa12.46□□□□□ -0.41
SOX2-OT-249ENST00000628810 NTSR2O95665 410 aa12.46□□□□□ -0.41
SOX2-OT-249ENST00000628810 GPTP24298 496 aa12.46□□□□□ -0.41
SOX2-OT-249ENST00000628810 CWF19L2Q2TBE0 894 aaKnown RBP12.46□□□□□ -0.41
SOX2-OT-249ENST00000628810 SLC4A10Q6U841 1118 aa12.46□□□□□ -0.41
SOX2-OT-249ENST00000628810 FTSJ3Q8IY81 847 aaKnown RBP12.46□□□□□ -0.41
SOX2-OT-249ENST00000628810 SETDB2Q96T68 719 aa12.46□□□□□ -0.41
SOX2-OT-249ENST00000628810 CWC25Q9NXE8 425 aaPredicted RBP12.46□□□□□ -0.41
SOX2-OT-249ENST00000628810 LRP5O75197 1615 aa12.46□□□□□ -0.41
SOX2-OT-249ENST00000628810 KIF13BQ9NQT8 1826 aa12.46□□□□□ -0.42
SOX2-OT-249ENST00000628810 DDX60Q8IY21 1712 aaKnown RBP12.45□□□□□ -0.42
SOX2-OT-249ENST00000628810 ATP5J2-PTCD1G3V325 749 aa12.45□□□□□ -0.42
SOX2-OT-249ENST00000628810 ZBTB7AO95365 584 aa12.45□□□□□ -0.42
SOX2-OT-249ENST00000628810 MMP10P09238 476 aa12.45□□□□□ -0.42
SOX2-OT-249ENST00000628810 GCKRQ14397 625 aa12.45□□□□□ -0.42
SOX2-OT-249ENST00000628810 GSE1Q14687 1217 aa12.45□□□□□ -0.42
SOX2-OT-249ENST00000628810 MSL1Q68DK7 614 aa12.45□□□□□ -0.42
SOX2-OT-249ENST00000628810 PPP1R42Q7Z4L9 355 aa12.45□□□□□ -0.42
SOX2-OT-249ENST00000628810 TMEM57Q8N5G2 664 aa12.45□□□□□ -0.42
SOX2-OT-249ENST00000628810 CLUAP1Q96AJ1 413 aa12.45□□□□□ -0.42
SOX2-OT-249ENST00000628810 NYXQ9GZU5 481 aa12.45□□□□□ -0.42
SOX2-OT-249ENST00000628810 SUPT16HQ9Y5B9 1047 aaKnown RBP12.45□□□□□ -0.42
SOX2-OT-249ENST00000628810 C10orf71Q711Q0 1435 aa12.45□□□□□ -0.42
SOX2-OT-249ENST00000628810 CDHR2Q9BYE9 1310 aa12.44□□□□□ -0.42
SOX2-OT-249ENST00000628810 PTGER2P43116 358 aa12.44□□□□□ -0.42
SOX2-OT-249ENST00000628810 MVPQ14764 893 aaKnown RBP12.44□□□□□ -0.42
SOX2-OT-249ENST00000628810 C20orf194Q5TEA3 1177 aa12.44□□□□□ -0.42
SOX2-OT-249ENST00000628810 SUSD4Q5VX71 490 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms