RNA–Protein interactions for RNA: ENST00000628665.1

CHRNA4-212, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 4

Gene CHRNA4, Length 546 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-212ENST00000628665 NLRP3Q96P20 1036 aa20.56■□□□□ 0.88
CHRNA4-212ENST00000628665 ABCC12Q96J65 1359 aa20.56■□□□□ 0.88
CHRNA4-212ENST00000628665 RNF123Q5XPI4 1314 aa20.55■□□□□ 0.88
CHRNA4-212ENST00000628665 ARFGEF2Q9Y6D5 1785 aa20.55■□□□□ 0.88
CHRNA4-212ENST00000628665 CCDC30Q5VVM6 783 aa20.55■□□□□ 0.88
CHRNA4-212ENST00000628665 RBM17Q96I25 401 aaKnown RBP20.55■□□□□ 0.88
CHRNA4-212ENST00000628665 GOLGA2Q08379 1002 aa20.54■□□□□ 0.88
CHRNA4-212ENST00000628665 CRY2Q49AN0 593 aa20.54■□□□□ 0.88
CHRNA4-212ENST00000628665 NLRP10Q86W26 655 aa20.54■□□□□ 0.88
CHRNA4-212ENST00000628665 C16orf71Q8IYS4 520 aaPredicted RBP20.54■□□□□ 0.88
CHRNA4-212ENST00000628665 C8orf58Q8NAV2 365 aa20.54■□□□□ 0.88
CHRNA4-212ENST00000628665 TRMT112Q9UI30 125 aaKnown RBP20.54■□□□□ 0.88
CHRNA4-212ENST00000628665 SALL2Q9Y467 1007 aaPredicted RBP20.54■□□□□ 0.88
CHRNA4-212ENST00000628665 FER1L6Q2WGJ9 1857 aa20.54■□□□□ 0.88
CHRNA4-212ENST00000628665 LTBP3Q9NS15 1303 aa20.53■□□□□ 0.88
CHRNA4-212ENST00000628665 RIC1Q4ADV7 1423 aa20.53■□□□□ 0.88
CHRNA4-212ENST00000628665 KIF3CO14782 793 aa20.53■□□□□ 0.88
CHRNA4-212ENST00000628665 RIC3Q7Z5B4 369 aa20.53■□□□□ 0.88
CHRNA4-212ENST00000628665 RTKN2Q8IZC4 609 aa20.53■□□□□ 0.88
CHRNA4-212ENST00000628665 TSR2Q969E8 191 aaKnown RBP20.53■□□□□ 0.88
CHRNA4-212ENST00000628665 ANKRD36CQ5JPF3 1778 aa20.53■□□□□ 0.88
CHRNA4-212ENST00000628665 IL16Q14005 1332 aa20.53■□□□□ 0.88
CHRNA4-212ENST00000628665 DPY19L2Q6NUT2 758 aa20.52■□□□□ 0.88
CHRNA4-212ENST00000628665 TMX4Q9H1E5 349 aaPredicted RBP20.52■□□□□ 0.88
CHRNA4-212ENST00000628665 NMRK2Q9NPI5 230 aa20.52■□□□□ 0.88
CHRNA4-212ENST00000628665 SLC10A5Q5PT55 438 aa20.51■□□□□ 0.87
CHRNA4-212ENST00000628665 C7orf43Q8WVR3 580 aa20.51■□□□□ 0.87
CHRNA4-212ENST00000628665 STK31Q9BXU1 1019 aa20.51■□□□□ 0.87
CHRNA4-212ENST00000628665 TNRC6CQ9HCJ0 1690 aaKnown RBP20.51■□□□□ 0.87
CHRNA4-212ENST00000628665 SH3TC1Q8TE82 1336 aa20.51■□□□□ 0.87
CHRNA4-212ENST00000628665 GLTPD2A6NH11 291 aa20.5■□□□□ 0.87
CHRNA4-212ENST00000628665 DDX58O95786 925 aaKnown RBP20.5■□□□□ 0.87
CHRNA4-212ENST00000628665 HOXA10P31260 410 aaPredicted RBP20.5■□□□□ 0.87
CHRNA4-212ENST00000628665 PRELPP51888 382 aa20.5■□□□□ 0.87
CHRNA4-212ENST00000628665 CC2D2BQ6DHV5 1058 aa20.5■□□□□ 0.87
CHRNA4-212ENST00000628665 WDR63Q8IWG1 891 aa20.5■□□□□ 0.87
CHRNA4-212ENST00000628665 CRAMP1Q96RY5 1269 aa20.5■□□□□ 0.87
CHRNA4-212ENST00000628665 TOMM70O94826 608 aa20.49■□□□□ 0.87
CHRNA4-212ENST00000628665 FKBP4Q02790 459 aaKnown RBP eCLIP20.49■□□□□ 0.87
CHRNA4-212ENST00000628665 PHAXQ9H814 394 aaKnown RBP20.49■□□□□ 0.87
CHRNA4-212ENST00000628665 RRAGCQ9HB90 399 aa20.49■□□□□ 0.87
CHRNA4-212ENST00000628665 DICER1Q9UPY3 1922 aaKnown RBP20.49■□□□□ 0.87
CHRNA4-212ENST00000628665 ATP5J2-PTCD1G3V325 749 aa20.48■□□□□ 0.87
CHRNA4-212ENST00000628665 HCLS1P14317 486 aaPredicted RBP20.48■□□□□ 0.87
CHRNA4-212ENST00000628665 TWISTNBQ3B726 338 aaPredicted RBP20.48■□□□□ 0.87
CHRNA4-212ENST00000628665 GRIPAP1Q4V328 841 aa20.48■□□□□ 0.87
CHRNA4-212ENST00000628665 TSPYL6Q8N831 410 aa20.48■□□□□ 0.87
CHRNA4-212ENST00000628665 TIAM2Q8IVF5 1701 aa20.47■□□□□ 0.87
CHRNA4-212ENST00000628665 ISCA1Q9BUE6 129 aa20.47■□□□□ 0.87
CHRNA4-212ENST00000628665 PPEF1O14829 653 aaPredicted RBP20.46■□□□□ 0.87
CHRNA4-212ENST00000628665 OLFM4Q6UX06 510 aa20.46■□□□□ 0.87
CHRNA4-212ENST00000628665 DDX46Q7L014 1031 aaKnown RBP20.46■□□□□ 0.87
CHRNA4-212ENST00000628665 ZNF428Q96B54 188 aa20.46■□□□□ 0.87
CHRNA4-212ENST00000628665 TCERG1O14776 1098 aaKnown RBP20.45■□□□□ 0.86
CHRNA4-212ENST00000628665 HSP90B1P14625 803 aaKnown RBP20.45■□□□□ 0.86
CHRNA4-212ENST00000628665 VEGFAP15692 232 aaPredicted RBP20.45■□□□□ 0.86
CHRNA4-212ENST00000628665 TRIM28Q13263 835 aaKnown RBP20.45■□□□□ 0.86
CHRNA4-212ENST00000628665 C3orf67Q6ZVT6 689 aa20.45■□□□□ 0.86
CHRNA4-212ENST00000628665 SYNE4Q8N205 404 aa20.45■□□□□ 0.86
CHRNA4-212ENST00000628665 ZNF277Q9NRM2 450 aaPredicted RBP20.45■□□□□ 0.86
CHRNA4-212ENST00000628665 FAM89AQ96GI7 184 aa20.44■□□□□ 0.86
CHRNA4-212ENST00000628665 MYD88Q99836 296 aa20.44■□□□□ 0.86
CHRNA4-212ENST00000628665 BBOX1O75936 387 aa20.43■□□□□ 0.86
CHRNA4-212ENST00000628665 RBM46Q8TBY0 533 aaKnown RBP20.43■□□□□ 0.86
CHRNA4-212ENST00000628665 PSMD1Q99460 953 aa20.43■□□□□ 0.86
CHRNA4-212ENST00000628665 MYH16Q9H6N6 1097 aa20.43■□□□□ 0.86
CHRNA4-212ENST00000628665 FANCIQ9NVI1 1328 aa20.43■□□□□ 0.86
CHRNA4-212ENST00000628665 SLC4A2P04920 1241 aa20.42■□□□□ 0.86
CHRNA4-212ENST00000628665 IARSP41252 1262 aaKnown RBP20.42■□□□□ 0.86
CHRNA4-212ENST00000628665 RTL5Q5HYW3 569 aaPredicted RBP20.42■□□□□ 0.86
CHRNA4-212ENST00000628665 JDP2Q8WYK2 163 aa20.42■□□□□ 0.86
CHRNA4-212ENST00000628665 ABCC4O15439 1325 aa20.42■□□□□ 0.86
CHRNA4-212ENST00000628665 HSPA6P17066 643 aa20.41■□□□□ 0.86
CHRNA4-212ENST00000628665 NEXNQ0ZGT2 675 aa20.41■□□□□ 0.86
CHRNA4-212ENST00000628665 KSR2Q6VAB6 950 aa20.41■□□□□ 0.86
CHRNA4-212ENST00000628665 CCDC191Q8NCU4 936 aa20.41■□□□□ 0.86
CHRNA4-212ENST00000628665 METTL22Q9BUU2 404 aaPredicted RBP20.41■□□□□ 0.86
CHRNA4-212ENST00000628665 MAP3K2Q9Y2U5 619 aa20.41■□□□□ 0.86
CHRNA4-212ENST00000628665 ATP6V0A2Q9Y487 856 aa20.41■□□□□ 0.86
CHRNA4-212ENST00000628665 IRS4O14654 1257 aaPredicted RBP20.4■□□□□ 0.86
CHRNA4-212ENST00000628665 ZBTB38Q8NAP3 1195 aaPredicted RBP20.4■□□□□ 0.86
CHRNA4-212ENST00000628665 CWC25Q9NXE8 425 aaPredicted RBP20.4■□□□□ 0.86
CHRNA4-212ENST00000628665 LAMB2P55268 1798 aa20.39■□□□□ 0.86
CHRNA4-212ENST00000628665 PI4KAP2A4QPH2 592 aa20.39■□□□□ 0.85
CHRNA4-212ENST00000628665 EXOSC9Q06265 439 aaKnown RBP20.39■□□□□ 0.85
CHRNA4-212ENST00000628665 GRAPQ13588 217 aa20.39■□□□□ 0.85
CHRNA4-212ENST00000628665 PI4KAP1Q8N8J0 262 aa20.39■□□□□ 0.85
CHRNA4-212ENST00000628665 GRAPLQ8TC17 118 aaPredicted RBP20.39■□□□□ 0.85
CHRNA4-212ENST00000628665 DDNO94850 711 aaPredicted RBP20.38■□□□□ 0.85
CHRNA4-212ENST00000628665 FSTL1Q12841 308 aa20.38■□□□□ 0.85
CHRNA4-212ENST00000628665 TMC4Q7Z404 712 aa20.38■□□□□ 0.85
CHRNA4-212ENST00000628665 SP8Q8IXZ3 490 aa20.38■□□□□ 0.85
CHRNA4-212ENST00000628665 SUPT20HQ8NEM7 779 aa20.38■□□□□ 0.85
CHRNA4-212ENST00000628665 CACNA1FO60840 1977 aa20.37■□□□□ 0.85
CHRNA4-212ENST00000628665 SF3B3Q15393 1217 aaKnown RBP20.37■□□□□ 0.85
CHRNA4-212ENST00000628665 LARGE2Q8N3Y3 721 aa20.37■□□□□ 0.85
CHRNA4-212ENST00000628665 SMC1BQ8NDV3 1235 aa20.37■□□□□ 0.85
CHRNA4-212ENST00000628665 IQCA1LA6NCM1 817 aa20.36■□□□□ 0.85
CHRNA4-212ENST00000628665 VAMP4O75379 141 aa20.36■□□□□ 0.85
CHRNA4-212ENST00000628665 PCCAP05165 728 aaPredicted RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms