RNA–Protein interactions for RNA: ENST00000628614.1

SPTAN1-214, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTAN1, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-214ENST00000628614 UTP14AQ9BVJ6 771 aaKnown RBP22.31■■□□□ 1.16
SPTAN1-214ENST00000628614 RNF123Q5XPI4 1314 aa22.31■■□□□ 1.16
SPTAN1-214ENST00000628614 C16orf71Q8IYS4 520 aaPredicted RBP22.3■■□□□ 1.16
SPTAN1-214ENST00000628614 RPGRQ92834 1020 aaKnown RBP22.3■■□□□ 1.16
SPTAN1-214ENST00000628614 GLTPD2A6NH11 291 aa22.29■■□□□ 1.16
SPTAN1-214ENST00000628614 HYPKQ9NX55 129 aa22.29■■□□□ 1.16
SPTAN1-214ENST00000628614 ANKRD36CQ5JPF3 1778 aa22.28■■□□□ 1.16
SPTAN1-214ENST00000628614 TCIRG1Q13488 830 aa22.28■■□□□ 1.16
SPTAN1-214ENST00000628614 CCDC27Q2M243 656 aa22.28■■□□□ 1.16
SPTAN1-214ENST00000628614 RTKN2Q8IZC4 609 aa22.28■■□□□ 1.16
SPTAN1-214ENST00000628614 HSPA6P17066 643 aa22.27■■□□□ 1.16
SPTAN1-214ENST00000628614 HOXA10P31260 410 aaPredicted RBP22.27■■□□□ 1.16
SPTAN1-214ENST00000628614 CCDC88AQ3V6T2 1871 aa22.27■■□□□ 1.16
SPTAN1-214ENST00000628614 NLRP10Q86W26 655 aa22.27■■□□□ 1.16
SPTAN1-214ENST00000628614 PLBD2Q8NHP8 589 aa22.27■■□□□ 1.16
SPTAN1-214ENST00000628614 RBM17Q96I25 401 aaKnown RBP22.27■■□□□ 1.16
SPTAN1-214ENST00000628614 CHMP4AQ9BY43 222 aa22.27■■□□□ 1.16
SPTAN1-214ENST00000628614 RRAGCQ9HB90 399 aa22.27■■□□□ 1.16
SPTAN1-214ENST00000628614 FKBP4Q02790 459 aaKnown RBP eCLIP22.26■■□□□ 1.15
SPTAN1-214ENST00000628614 NCBP3Q53F19 620 aaKnown RBP22.26■■□□□ 1.15
SPTAN1-214ENST00000628614 DPY19L2Q6NUT2 758 aa22.26■■□□□ 1.15
SPTAN1-214ENST00000628614 ANKRD13DQ6ZTN6 518 aa22.26■■□□□ 1.15
SPTAN1-214ENST00000628614 RBM46Q8TBY0 533 aaKnown RBP22.26■■□□□ 1.15
SPTAN1-214ENST00000628614 NLRP3Q96P20 1036 aa22.26■■□□□ 1.15
SPTAN1-214ENST00000628614 SLC10A5Q5PT55 438 aa22.25■■□□□ 1.15
SPTAN1-214ENST00000628614 DICER1Q9UPY3 1922 aaKnown RBP22.25■■□□□ 1.15
SPTAN1-214ENST00000628614 ELL2O00472 640 aaPredicted RBP22.24■■□□□ 1.15
SPTAN1-214ENST00000628614 CC2D2BQ6DHV5 1058 aa22.24■■□□□ 1.15
SPTAN1-214ENST00000628614 WWC1Q8IX03 1113 aa22.24■■□□□ 1.15
SPTAN1-214ENST00000628614 CRAMP1Q96RY5 1269 aa22.24■■□□□ 1.15
SPTAN1-214ENST00000628614 TRMT112Q9UI30 125 aaKnown RBP22.24■■□□□ 1.15
SPTAN1-214ENST00000628614 CEP350Q5VT06 3117 aa22.24■■□□□ 1.15
SPTAN1-214ENST00000628614 VEGFAP15692 232 aaPredicted RBP22.23■■□□□ 1.15
SPTAN1-214ENST00000628614 OLFM4Q6UX06 510 aa22.23■■□□□ 1.15
SPTAN1-214ENST00000628614 GRIPAP1Q4V328 841 aa22.22■■□□□ 1.15
SPTAN1-214ENST00000628614 C3orf67Q6ZVT6 689 aa22.22■■□□□ 1.15
SPTAN1-214ENST00000628614 C8orf58Q8NAV2 365 aa22.22■■□□□ 1.15
SPTAN1-214ENST00000628614 SH3TC1Q8TE82 1336 aa22.22■■□□□ 1.15
SPTAN1-214ENST00000628614 GOLGA2Q08379 1002 aa22.21■■□□□ 1.15
SPTAN1-214ENST00000628614 FSTL1Q12841 308 aa22.21■■□□□ 1.15
SPTAN1-214ENST00000628614 CCDC30Q5VVM6 783 aa22.21■■□□□ 1.15
SPTAN1-214ENST00000628614 ISCA1Q9BUE6 129 aa22.21■■□□□ 1.15
SPTAN1-214ENST00000628614 ZNF277Q9NRM2 450 aaPredicted RBP22.21■■□□□ 1.15
SPTAN1-214ENST00000628614 IL16Q14005 1332 aa22.21■■□□□ 1.15
SPTAN1-214ENST00000628614 SNED1Q8TER0 1413 aa22.21■■□□□ 1.15
SPTAN1-214ENST00000628614 PPEF1O14829 653 aaPredicted RBP22.2■■□□□ 1.14
SPTAN1-214ENST00000628614 PSMD1Q99460 953 aa22.2■■□□□ 1.14
SPTAN1-214ENST00000628614 WDR90Q96KV7 1748 aa22.2■■□□□ 1.14
SPTAN1-214ENST00000628614 HCLS1P14317 486 aaPredicted RBP22.19■■□□□ 1.14
SPTAN1-214ENST00000628614 RIC3Q7Z5B4 369 aa22.19■■□□□ 1.14
SPTAN1-214ENST00000628614 SYNE4Q8N205 404 aa22.19■■□□□ 1.14
SPTAN1-214ENST00000628614 TSR2Q969E8 191 aaKnown RBP22.19■■□□□ 1.14
SPTAN1-214ENST00000628614 IARSP41252 1262 aaKnown RBP22.18■■□□□ 1.14
SPTAN1-214ENST00000628614 TMX4Q9H1E5 349 aaPredicted RBP22.18■■□□□ 1.14
SPTAN1-214ENST00000628614 PHAXQ9H814 394 aaKnown RBP22.18■■□□□ 1.14
SPTAN1-214ENST00000628614 ABCC4O15439 1325 aa22.17■■□□□ 1.14
SPTAN1-214ENST00000628614 ATP5J2-PTCD1G3V325 749 aa22.17■■□□□ 1.14
SPTAN1-214ENST00000628614 APLP1P51693 650 aa22.17■■□□□ 1.14
SPTAN1-214ENST00000628614 TRIM28Q13263 835 aaKnown RBP22.17■■□□□ 1.14
SPTAN1-214ENST00000628614 TSPYL6Q8N831 410 aa22.17■■□□□ 1.14
SPTAN1-214ENST00000628614 SMC1BQ8NDV3 1235 aa22.17■■□□□ 1.14
SPTAN1-214ENST00000628614 DDX58O95786 925 aaKnown RBP22.16■■□□□ 1.14
SPTAN1-214ENST00000628614 DDNO94850 711 aaPredicted RBP22.15■■□□□ 1.14
SPTAN1-214ENST00000628614 DDX46Q7L014 1031 aaKnown RBP22.15■■□□□ 1.14
SPTAN1-214ENST00000628614 ATP6V0A2Q9Y487 856 aa22.15■■□□□ 1.14
SPTAN1-214ENST00000628614 LAMB2P55268 1798 aa22.15■■□□□ 1.14
SPTAN1-214ENST00000628614 POTECB2RU33 542 aa22.14■■□□□ 1.13
SPTAN1-214ENST00000628614 TCERG1O14776 1098 aaKnown RBP22.14■■□□□ 1.13
SPTAN1-214ENST00000628614 BBOX1O75936 387 aa22.14■■□□□ 1.13
SPTAN1-214ENST00000628614 WDR63Q8IWG1 891 aa22.14■■□□□ 1.13
SPTAN1-214ENST00000628614 JDP2Q8WYK2 163 aa22.14■■□□□ 1.13
SPTAN1-214ENST00000628614 STK31Q9BXU1 1019 aa22.14■■□□□ 1.13
SPTAN1-214ENST00000628614 TWISTNBQ3B726 338 aaPredicted RBP22.13■■□□□ 1.13
SPTAN1-214ENST00000628614 ZNF428Q96B54 188 aa22.13■■□□□ 1.13
SPTAN1-214ENST00000628614 FAM89AQ96GI7 184 aa22.13■■□□□ 1.13
SPTAN1-214ENST00000628614 IQCA1LA6NCM1 817 aa22.12■■□□□ 1.13
SPTAN1-214ENST00000628614 FZD9O00144 591 aa22.12■■□□□ 1.13
SPTAN1-214ENST00000628614 GRAPQ13588 217 aa22.12■■□□□ 1.13
SPTAN1-214ENST00000628614 FAM9BQ8IZU0 186 aa22.12■■□□□ 1.13
SPTAN1-214ENST00000628614 GRAPLQ8TC17 118 aaPredicted RBP22.12■■□□□ 1.13
SPTAN1-214ENST00000628614 L3MBTL3Q96JM7 780 aaPredicted RBP22.12■■□□□ 1.13
SPTAN1-214ENST00000628614 MYD88Q99836 296 aa22.12■■□□□ 1.13
SPTAN1-214ENST00000628614 SALL2Q9Y467 1007 aaPredicted RBP22.12■■□□□ 1.13
SPTAN1-214ENST00000628614 DDX60Q8IY21 1712 aaKnown RBP22.11■■□□□ 1.13
SPTAN1-214ENST00000628614 ZNF541Q9H0D2 1346 aa22.11■■□□□ 1.13
SPTAN1-214ENST00000628614 FANCIQ9NVI1 1328 aa22.11■■□□□ 1.13
SPTAN1-214ENST00000628614 HSP90B1P14625 803 aaKnown RBP22.11■■□□□ 1.13
SPTAN1-214ENST00000628614 TMC4Q7Z404 712 aa22.11■■□□□ 1.13
SPTAN1-214ENST00000628614 CCDC191Q8NCU4 936 aa22.11■■□□□ 1.13
SPTAN1-214ENST00000628614 IRS4O14654 1257 aaPredicted RBP22.1■■□□□ 1.13
SPTAN1-214ENST00000628614 SF3B3Q15393 1217 aaKnown RBP22.1■■□□□ 1.13
SPTAN1-214ENST00000628614 SLC51AQ86UW1 340 aa22.1■■□□□ 1.13
SPTAN1-214ENST00000628614 SP8Q8IXZ3 490 aa22.1■■□□□ 1.13
SPTAN1-214ENST00000628614 ZBTB38Q8NAP3 1195 aaPredicted RBP22.1■■□□□ 1.13
SPTAN1-214ENST00000628614 METTL22Q9BUU2 404 aaPredicted RBP22.1■■□□□ 1.13
SPTAN1-214ENST00000628614 RTL5Q5HYW3 569 aaPredicted RBP22.09■■□□□ 1.13
SPTAN1-214ENST00000628614 LARGE2Q8N3Y3 721 aa22.09■■□□□ 1.13
SPTAN1-214ENST00000628614 SUPT20HQ8NEM7 779 aa22.09■■□□□ 1.13
SPTAN1-214ENST00000628614 VPS33BQ9H267 617 aa22.09■■□□□ 1.13
SPTAN1-214ENST00000628614 EIF6P56537 245 aaKnown RBP22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms