RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 PIP4K2AP48426 406 aaPredicted RBP12.6□□□□□ -0.39
FOXCUT-201ENST00000628509 CWF19L2Q2TBE0 894 aaKnown RBP12.6□□□□□ -0.39
FOXCUT-201ENST00000628509 CEP85Q6P2H3 762 aa12.6□□□□□ -0.39
FOXCUT-201ENST00000628509 TTLL7Q6ZT98 887 aa12.6□□□□□ -0.39
FOXCUT-201ENST00000628509 ERC1Q8IUD2 1116 aa12.6□□□□□ -0.39
FOXCUT-201ENST00000628509 LINC00116Q8NCU8 138 aa12.6□□□□□ -0.39
FOXCUT-201ENST00000628509 NYXQ9GZU5 481 aa12.6□□□□□ -0.39
FOXCUT-201ENST00000628509 LRRFIP2Q9Y608 721 aaKnown RBP12.6□□□□□ -0.39
FOXCUT-201ENST00000628509 TAF1LQ8IZX4 1826 aa12.6□□□□□ -0.39
FOXCUT-201ENST00000628509 ANKRD36CQ5JPF3 1778 aa12.59□□□□□ -0.39
FOXCUT-201ENST00000628509 PITPNM1O00562 1244 aa12.59□□□□□ -0.39
FOXCUT-201ENST00000628509 EIF5BO60841 1220 aaKnown RBP12.59□□□□□ -0.39
FOXCUT-201ENST00000628509 RAB11FIP3O75154 756 aa12.59□□□□□ -0.39
FOXCUT-201ENST00000628509 PCCAP05165 728 aaPredicted RBP12.59□□□□□ -0.39
FOXCUT-201ENST00000628509 MTX1Q13505 466 aa12.59□□□□□ -0.39
FOXCUT-201ENST00000628509 TXNRD1Q16881 649 aa12.59□□□□□ -0.39
FOXCUT-201ENST00000628509 ZBTB38Q8NAP3 1195 aaPredicted RBP12.59□□□□□ -0.39
FOXCUT-201ENST00000628509 ISCA1Q9BUE6 129 aa12.59□□□□□ -0.39
FOXCUT-201ENST00000628509 NARFQ9UHQ1 456 aa12.59□□□□□ -0.39
FOXCUT-201ENST00000628509 C4BP0C0L5 1744 aa12.59□□□□□ -0.39
FOXCUT-201ENST00000628509 IGKV5-2P06315 115 aa12.58□□□□□ -0.4
FOXCUT-201ENST00000628509 UBE3BQ7Z3V4 1068 aa12.58□□□□□ -0.4
FOXCUT-201ENST00000628509 SMC5Q8IY18 1101 aa12.58□□□□□ -0.4
FOXCUT-201ENST00000628509 DCTPP1Q9H773 170 aa12.58□□□□□ -0.4
FOXCUT-201ENST00000628509 TBC1D2BQ9UPU7 963 aa12.58□□□□□ -0.4
FOXCUT-201ENST00000628509 CDHR2Q9BYE9 1310 aa12.58□□□□□ -0.4
FOXCUT-201ENST00000628509 ATP5J2-PTCD1G3V325 749 aa12.57□□□□□ -0.4
FOXCUT-201ENST00000628509 H7C1W4 665 aa12.57□□□□□ -0.4
FOXCUT-201ENST00000628509 NPHP1O15259 732 aa12.57□□□□□ -0.4
FOXCUT-201ENST00000628509 SRGAP3O43295 1099 aa12.57□□□□□ -0.4
FOXCUT-201ENST00000628509 NBPF7P0C2Y1 421 aaPredicted RBP12.57□□□□□ -0.4
FOXCUT-201ENST00000628509 GTF2E1P29083 439 aaPredicted RBP12.57□□□□□ -0.4
FOXCUT-201ENST00000628509 UTP14AQ9BVJ6 771 aaKnown RBP12.57□□□□□ -0.4
FOXCUT-201ENST00000628509 C1orf115Q9H7X2 142 aa12.57□□□□□ -0.4
FOXCUT-201ENST00000628509 TRMT112Q9UI30 125 aaKnown RBP12.57□□□□□ -0.4
FOXCUT-201ENST00000628509 NUP98P52948 1817 aa12.57□□□□□ -0.4
FOXCUT-201ENST00000628509 CAMTA2O94983 1202 aa12.56□□□□□ -0.4
FOXCUT-201ENST00000628509 IGHDP01880 384 aa12.56□□□□□ -0.4
FOXCUT-201ENST00000628509 OS9Q13438 667 aaPredicted RBP12.56□□□□□ -0.4
FOXCUT-201ENST00000628509 SSH3Q8TE77 659 aa12.56□□□□□ -0.4
FOXCUT-201ENST00000628509 SETDB2Q96T68 719 aa12.56□□□□□ -0.4
FOXCUT-201ENST00000628509 FBXO3Q9UK99 471 aa12.56□□□□□ -0.4
FOXCUT-201ENST00000628509 NIP7Q9Y221 180 aaKnown RBP eCLIP12.56□□□□□ -0.4
FOXCUT-201ENST00000628509 SH3TC1Q8TE82 1336 aa12.56□□□□□ -0.4
FOXCUT-201ENST00000628509 G3BP1Q13283 466 aaKnown RBP eCLIP12.55□□□□□ -0.4
FOXCUT-201ENST00000628509 NLRP10Q86W26 655 aa12.55□□□□□ -0.4
FOXCUT-201ENST00000628509 ZNF34Q8IZ26 560 aa12.55□□□□□ -0.4
FOXCUT-201ENST00000628509 PLA2G12BQ9BX93 195 aa12.55□□□□□ -0.4
FOXCUT-201ENST00000628509 TFCP2L1Q9NZI6 479 aa12.55□□□□□ -0.4
FOXCUT-201ENST00000628509 MYH14Q7Z406 1995 aaKnown RBP12.55□□□□□ -0.4
FOXCUT-201ENST00000628509 BCORQ6W2J9 1755 aa12.55□□□□□ -0.4
FOXCUT-201ENST00000628509 PDE8AO60658 829 aa12.54□□□□□ -0.4
FOXCUT-201ENST00000628509 SURF6O75683 361 aaKnown RBP12.54□□□□□ -0.4
FOXCUT-201ENST00000628509 NUCB1Q02818 461 aa12.54□□□□□ -0.4
FOXCUT-201ENST00000628509 CCDC57Q2TAC2 916 aa12.54□□□□□ -0.4
FOXCUT-201ENST00000628509 TAF7LQ5H9L4 462 aa12.54□□□□□ -0.4
FOXCUT-201ENST00000628509 ANKRD45Q5TZF3 282 aa12.54□□□□□ -0.4
FOXCUT-201ENST00000628509 TPTE2Q6XPS3 522 aa12.54□□□□□ -0.4
FOXCUT-201ENST00000628509 ILDR1Q86SU0 546 aaPredicted RBP12.54□□□□□ -0.4
FOXCUT-201ENST00000628509 KIF1BPQ96EK5 621 aa12.54□□□□□ -0.4
FOXCUT-201ENST00000628509 LRRCC1Q9C099 1032 aa12.54□□□□□ -0.4
FOXCUT-201ENST00000628509 STK32BQ9NY57 414 aa12.54□□□□□ -0.4
FOXCUT-201ENST00000628509 SCN7AQ01118 1682 aa12.54□□□□□ -0.4
FOXCUT-201ENST00000628509 HAX1O00165 279 aa12.53□□□□□ -0.4
FOXCUT-201ENST00000628509 HLFQ16534 295 aa12.53□□□□□ -0.4
FOXCUT-201ENST00000628509 RABL6Q3YEC7 729 aaPredicted RBP12.53□□□□□ -0.4
FOXCUT-201ENST00000628509 PTF1AQ7RTS3 328 aa12.53□□□□□ -0.4
FOXCUT-201ENST00000628509 CHD1LQ86WJ1 897 aa12.53□□□□□ -0.4
FOXCUT-201ENST00000628509 GPATCH3Q96I76 525 aa12.53□□□□□ -0.4
FOXCUT-201ENST00000628509 SUCLG2Q96I99 432 aa12.53□□□□□ -0.4
FOXCUT-201ENST00000628509 BICC1Q9H694 974 aaKnown RBP12.53□□□□□ -0.4
FOXCUT-201ENST00000628509 CHMP3Q9Y3E7 222 aa12.53□□□□□ -0.4
FOXCUT-201ENST00000628509 USP42Q9H9J4 1324 aaKnown RBP12.53□□□□□ -0.4
FOXCUT-201ENST00000628509 TNS1Q9HBL0 1735 aaKnown RBP12.53□□□□□ -0.4
FOXCUT-201ENST00000628509 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.52□□□□□ -0.41
FOXCUT-201ENST00000628509 GPTP24298 496 aa12.52□□□□□ -0.41
FOXCUT-201ENST00000628509 FXR2P51116 673 aaKnown RBP eCLIP12.52□□□□□ -0.41
FOXCUT-201ENST00000628509 IFIT5Q13325 482 aaKnown RBP12.52□□□□□ -0.41
FOXCUT-201ENST00000628509 NLGN1Q8N2Q7 840 aa12.52□□□□□ -0.41
FOXCUT-201ENST00000628509 ARHGEF1Q92888 912 aaKnown RBP12.52□□□□□ -0.41
FOXCUT-201ENST00000628509 PDZRN3Q9UPQ7 1066 aa12.52□□□□□ -0.41
FOXCUT-201ENST00000628509 NOP58Q9Y2X3 529 aaKnown RBP12.52□□□□□ -0.41
FOXCUT-201ENST00000628509 CARMIL3Q8ND23 1372 aa12.52□□□□□ -0.41
FOXCUT-201ENST00000628509 IRS4O14654 1257 aaPredicted RBP12.51□□□□□ -0.41
FOXCUT-201ENST00000628509 PHF14O94880 888 aa12.51□□□□□ -0.41
FOXCUT-201ENST00000628509 CCDC152Q4G0S7 254 aa12.51□□□□□ -0.41
FOXCUT-201ENST00000628509 USPL1Q5W0Q7 1092 aa12.51□□□□□ -0.41
FOXCUT-201ENST00000628509 NBPF5PQ86XG9 351 aaPredicted RBP12.51□□□□□ -0.41
FOXCUT-201ENST00000628509 SIRT2Q8IXJ6 389 aa12.51□□□□□ -0.41
FOXCUT-201ENST00000628509 CLASRPQ8N2M8 674 aaKnown RBP12.51□□□□□ -0.41
FOXCUT-201ENST00000628509 LRRC4BQ9NT99 713 aa12.51□□□□□ -0.41
FOXCUT-201ENST00000628509 ANKRD18BA2A2Z9 1011 aa12.5□□□□□ -0.41
FOXCUT-201ENST00000628509 CASP7P55210 303 aa12.5□□□□□ -0.41
FOXCUT-201ENST00000628509 ST5P78524 1137 aa12.5□□□□□ -0.41
FOXCUT-201ENST00000628509 LMBR1LQ6UX01 489 aa12.5□□□□□ -0.41
FOXCUT-201ENST00000628509 FAM89AQ96GI7 184 aa12.5□□□□□ -0.41
FOXCUT-201ENST00000628509 COPRSQ9NQ92 184 aa12.5□□□□□ -0.41
FOXCUT-201ENST00000628509 UBR3Q6ZT12 1888 aa12.5□□□□□ -0.41
FOXCUT-201ENST00000628509 MYH3P11055 1940 aa12.5□□□□□ -0.41
FOXCUT-201ENST00000628509 PNMA6EA0A0J9YXQ4 647 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms