RNA–Protein interactions for RNA: ENST00000628211.2

SOX2-OT-245, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 847 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-245ENST00000628211 KSR2Q6VAB6 950 aa13.67□□□□□ -0.22
SOX2-OT-245ENST00000628211 UTP14AQ9BVJ6 771 aaKnown RBP13.67□□□□□ -0.22
SOX2-OT-245ENST00000628211 PHAXQ9H814 394 aaKnown RBP13.67□□□□□ -0.22
SOX2-OT-245ENST00000628211 PIM2Q9P1W9 311 aa13.67□□□□□ -0.22
SOX2-OT-245ENST00000628211 CACNA1SQ13698 1873 aa13.66□□□□□ -0.22
SOX2-OT-245ENST00000628211 DPEP1P16444 411 aa13.66□□□□□ -0.22
SOX2-OT-245ENST00000628211 NLRP10Q86W26 655 aa13.66□□□□□ -0.22
SOX2-OT-245ENST00000628211 ZNF784Q8NCA9 323 aaPredicted RBP13.66□□□□□ -0.22
SOX2-OT-245ENST00000628211 MYH3P11055 1940 aa13.65□□□□□ -0.22
SOX2-OT-245ENST00000628211 NTSR2O95665 410 aa13.65□□□□□ -0.22
SOX2-OT-245ENST00000628211 FKBP5Q13451 457 aaPredicted RBP13.65□□□□□ -0.22
SOX2-OT-245ENST00000628211 C2CD5Q86YS7 1000 aa13.65□□□□□ -0.22
SOX2-OT-245ENST00000628211 CCDC191Q8NCU4 936 aa13.65□□□□□ -0.22
SOX2-OT-245ENST00000628211 CDCA7LQ96GN5 454 aa13.65□□□□□ -0.22
SOX2-OT-245ENST00000628211 ISCA1Q9BUE6 129 aa13.65□□□□□ -0.22
SOX2-OT-245ENST00000628211 METTL22Q9BUU2 404 aaPredicted RBP13.65□□□□□ -0.22
SOX2-OT-245ENST00000628211 SH3TC1Q8TE82 1336 aa13.64□□□□□ -0.23
SOX2-OT-245ENST00000628211 TNRC6CQ9HCJ0 1690 aaKnown RBP13.64□□□□□ -0.23
SOX2-OT-245ENST00000628211 A0A0G2JLW4 131 aa13.64□□□□□ -0.23
SOX2-OT-245ENST00000628211 DALRD3Q5D0E6 543 aaKnown RBP13.64□□□□□ -0.23
SOX2-OT-245ENST00000628211 SUSD4Q5VX71 490 aa13.64□□□□□ -0.23
SOX2-OT-245ENST00000628211 STYK1Q6J9G0 422 aa13.64□□□□□ -0.23
SOX2-OT-245ENST00000628211 PELP1Q8IZL8 1130 aaKnown RBP13.64□□□□□ -0.23
SOX2-OT-245ENST00000628211 CNKSR1Q969H4 720 aa13.64□□□□□ -0.23
SOX2-OT-245ENST00000628211 MAP3K2Q9Y2U5 619 aa13.64□□□□□ -0.23
SOX2-OT-245ENST00000628211 DDX60Q8IY21 1712 aaKnown RBP13.64□□□□□ -0.23
SOX2-OT-245ENST00000628211 PTPRCP08575 1304 aa13.64□□□□□ -0.23
SOX2-OT-245ENST00000628211 ADCY9O60503 1353 aa13.63□□□□□ -0.23
SOX2-OT-245ENST00000628211 KLRG2A4D1S0 409 aaPredicted RBP13.63□□□□□ -0.23
SOX2-OT-245ENST00000628211 PI4KAP2A4QPH2 592 aa13.63□□□□□ -0.23
SOX2-OT-245ENST00000628211 FAM177BA6PVY3 158 aa13.63□□□□□ -0.23
SOX2-OT-245ENST00000628211 NPR1P16066 1061 aa13.63□□□□□ -0.23
SOX2-OT-245ENST00000628211 TTLL6Q8N841 843 aa13.63□□□□□ -0.23
SOX2-OT-245ENST00000628211 PI4KAP1Q8N8J0 262 aa13.63□□□□□ -0.23
SOX2-OT-245ENST00000628211 MASTLQ96GX5 879 aa13.63□□□□□ -0.23
SOX2-OT-245ENST00000628211 CWC25Q9NXE8 425 aaPredicted RBP13.63□□□□□ -0.23
SOX2-OT-245ENST00000628211 TRMT112Q9UI30 125 aaKnown RBP13.63□□□□□ -0.23
SOX2-OT-245ENST00000628211 ABCC12Q96J65 1359 aa13.62□□□□□ -0.23
SOX2-OT-245ENST00000628211 TCERG1O14776 1098 aaKnown RBP13.62□□□□□ -0.23
SOX2-OT-245ENST00000628211 SRGNP10124 158 aa13.62□□□□□ -0.23
SOX2-OT-245ENST00000628211 CHRNA5P30532 468 aa13.62□□□□□ -0.23
SOX2-OT-245ENST00000628211 ERFEQ4G0M1 354 aa13.62□□□□□ -0.23
SOX2-OT-245ENST00000628211 SLC10A5Q5PT55 438 aa13.62□□□□□ -0.23
SOX2-OT-245ENST00000628211 SOGA3Q5TF21 947 aa13.62□□□□□ -0.23
SOX2-OT-245ENST00000628211 DNAAF4Q8WXU2 420 aa13.62□□□□□ -0.23
SOX2-OT-245ENST00000628211 NLRP3Q96P20 1036 aa13.62□□□□□ -0.23
SOX2-OT-245ENST00000628211 MYD88Q99836 296 aa13.62□□□□□ -0.23
SOX2-OT-245ENST00000628211 BCS1LQ9Y276 419 aa13.62□□□□□ -0.23
SOX2-OT-245ENST00000628211 KCNA3P22001 575 aa13.61□□□□□ -0.23
SOX2-OT-245ENST00000628211 ALDH1B1P30837 517 aa13.61□□□□□ -0.23
SOX2-OT-245ENST00000628211 BRPF1P55201 1214 aaPredicted RBP13.61□□□□□ -0.23
SOX2-OT-245ENST00000628211 CRY2Q49AN0 593 aa13.61□□□□□ -0.23
SOX2-OT-245ENST00000628211 G2E3Q7L622 706 aa13.61□□□□□ -0.23
SOX2-OT-245ENST00000628211 NUTM1Q86Y26 1132 aa13.61□□□□□ -0.23
SOX2-OT-245ENST00000628211 RPGRQ92834 1020 aaKnown RBP13.61□□□□□ -0.23
SOX2-OT-245ENST00000628211 SMC4Q9NTJ3 1288 aa13.61□□□□□ -0.23
SOX2-OT-245ENST00000628211 U3KPZ7 1027 aaPredicted RBP13.61□□□□□ -0.23
SOX2-OT-245ENST00000628211 KIF16BQ96L93 1317 aa13.61□□□□□ -0.23
SOX2-OT-245ENST00000628211 ATP5J2-PTCD1G3V325 749 aa13.6□□□□□ -0.23
SOX2-OT-245ENST00000628211 MRPL50Q8N5N7 158 aaKnown RBP13.6□□□□□ -0.23
SOX2-OT-245ENST00000628211 ZBTB38Q8NAP3 1195 aaPredicted RBP13.6□□□□□ -0.23
SOX2-OT-245ENST00000628211 LINS1Q8NG48 757 aa13.6□□□□□ -0.23
SOX2-OT-245ENST00000628211 ZNF622Q969S3 477 aaKnown RBP eCLIP13.6□□□□□ -0.23
SOX2-OT-245ENST00000628211 CDHR2Q9BYE9 1310 aa13.6□□□□□ -0.23
SOX2-OT-245ENST00000628211 PCCAP05165 728 aaPredicted RBP13.59□□□□□ -0.23
SOX2-OT-245ENST00000628211 SSH1Q8WYL5 1049 aa13.59□□□□□ -0.23
SOX2-OT-245ENST00000628211 RBM17Q96I25 401 aaKnown RBP13.59□□□□□ -0.23
SOX2-OT-245ENST00000628211 SLX4Q8IY92 1834 aa13.59□□□□□ -0.23
SOX2-OT-245ENST00000628211 FER1L6Q2WGJ9 1857 aa13.59□□□□□ -0.23
SOX2-OT-245ENST00000628211 NEURL1BA8MQ27 555 aa13.58□□□□□ -0.24
SOX2-OT-245ENST00000628211 HOXA10P31260 410 aaPredicted RBP13.58□□□□□ -0.24
SOX2-OT-245ENST00000628211 GRIPAP1Q4V328 841 aa13.58□□□□□ -0.24
SOX2-OT-245ENST00000628211 CCDC24Q8N4L8 307 aa13.58□□□□□ -0.24
SOX2-OT-245ENST00000628211 GOLGB1Q14789 3259 aaKnown RBP13.58□□□□□ -0.24
SOX2-OT-245ENST00000628211 UTRNP46939 3433 aa13.57□□□□□ -0.24
SOX2-OT-245ENST00000628211 IRS4O14654 1257 aaPredicted RBP13.57□□□□□ -0.24
SOX2-OT-245ENST00000628211 ALDH1L1O75891 902 aa13.57□□□□□ -0.24
SOX2-OT-245ENST00000628211 CC2D2BQ6DHV5 1058 aa13.57□□□□□ -0.24
SOX2-OT-245ENST00000628211 CRAMP1Q96RY5 1269 aa13.57□□□□□ -0.24
SOX2-OT-245ENST00000628211 TMX4Q9H1E5 349 aaPredicted RBP13.57□□□□□ -0.24
SOX2-OT-245ENST00000628211 SBF1O95248 1867 aa13.57□□□□□ -0.24
SOX2-OT-245ENST00000628211 IPO8O15397 1037 aaKnown RBP13.56□□□□□ -0.24
SOX2-OT-245ENST00000628211 PDE8AO60658 829 aa13.56□□□□□ -0.24
SOX2-OT-245ENST00000628211 IGKV5-2P06315 115 aa13.56□□□□□ -0.24
SOX2-OT-245ENST00000628211 RARSP54136 660 aaKnown RBP13.56□□□□□ -0.24
SOX2-OT-245ENST00000628211 PRPF40BQ6NWY9 871 aaKnown RBP13.56□□□□□ -0.24
SOX2-OT-245ENST00000628211 DDX46Q7L014 1031 aaKnown RBP13.56□□□□□ -0.24
SOX2-OT-245ENST00000628211 TMC4Q7Z404 712 aa13.56□□□□□ -0.24
SOX2-OT-245ENST00000628211 FAM89AQ96GI7 184 aa13.56□□□□□ -0.24
SOX2-OT-245ENST00000628211 API5Q9BZZ5 524 aaKnown RBP13.56□□□□□ -0.24
SOX2-OT-245ENST00000628211 DICER1Q9UPY3 1922 aaKnown RBP13.56□□□□□ -0.24
SOX2-OT-245ENST00000628211 CCDC88AQ3V6T2 1871 aa13.55□□□□□ -0.24
SOX2-OT-245ENST00000628211 GCKRQ14397 625 aa13.55□□□□□ -0.24
SOX2-OT-245ENST00000628211 SF3B3Q15393 1217 aaKnown RBP13.55□□□□□ -0.24
SOX2-OT-245ENST00000628211 BEND3Q5T5X7 828 aa13.55□□□□□ -0.24
SOX2-OT-245ENST00000628211 ARHGAP45Q92619 1136 aa13.55□□□□□ -0.24
SOX2-OT-245ENST00000628211 SRCIN1Q9C0H9 1055 aa13.55□□□□□ -0.24
SOX2-OT-245ENST00000628211 HCLS1P14317 486 aaPredicted RBP13.54□□□□□ -0.24
SOX2-OT-245ENST00000628211 CWF19L2Q2TBE0 894 aaKnown RBP13.54□□□□□ -0.24
SOX2-OT-245ENST00000628211 CCDC152Q4G0S7 254 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms