RNA–Protein interactions for RNA: ENST00000627212.2

RAPGEF6-215, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF6, Length 4,694 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-215ENST00000627212 SMC5Q8IY18 1101 aa11.53□□□□□ -0.56
RAPGEF6-215ENST00000627212 IPO4Q8TEX9 1081 aaKnown RBP11.53□□□□□ -0.56
RAPGEF6-215ENST00000627212 PHF8Q9UPP1 1060 aa11.53□□□□□ -0.56
RAPGEF6-215ENST00000627212 PARD3Q8TEW0 1356 aa11.53□□□□□ -0.56
RAPGEF6-215ENST00000627212 MPHOSPH10O00566 681 aaKnown RBP11.53□□□□□ -0.56
RAPGEF6-215ENST00000627212 MAP3K12Q12852 859 aa11.53□□□□□ -0.56
RAPGEF6-215ENST00000627212 SPTY2D1Q68D10 685 aaPredicted RBP11.53□□□□□ -0.56
RAPGEF6-215ENST00000627212 LUZP1Q86V48 1076 aa11.53□□□□□ -0.56
RAPGEF6-215ENST00000627212 PRIMPOLQ96LW4 560 aa11.53□□□□□ -0.56
RAPGEF6-215ENST00000627212 RBSNQ9H1K0 784 aa11.53□□□□□ -0.56
RAPGEF6-215ENST00000627212 ACEP12821 1306 aa11.52□□□□□ -0.56
RAPGEF6-215ENST00000627212 PER1O15534 1290 aaPredicted RBP11.52□□□□□ -0.56
RAPGEF6-215ENST00000627212 UBASH3AP57075 661 aa11.52□□□□□ -0.56
RAPGEF6-215ENST00000627212 GSDMDP57764 484 aa11.52□□□□□ -0.56
RAPGEF6-215ENST00000627212 SSRP1Q08945 709 aaKnown RBP11.52□□□□□ -0.56
RAPGEF6-215ENST00000627212 KCNH5Q8NCM2 988 aa11.52□□□□□ -0.56
RAPGEF6-215ENST00000627212 ZNF397Q8NF99 534 aaPredicted RBP11.52□□□□□ -0.56
RAPGEF6-215ENST00000627212 CHRNA2Q15822 529 aa11.52□□□□□ -0.57
RAPGEF6-215ENST00000627212 UVSSAQ2YD98 709 aa11.52□□□□□ -0.57
RAPGEF6-215ENST00000627212 CCDC102BQ68D86 513 aa11.52□□□□□ -0.57
RAPGEF6-215ENST00000627212 IQCEQ6IPM2 695 aa11.52□□□□□ -0.57
RAPGEF6-215ENST00000627212 GBP3Q9H0R5 595 aa11.52□□□□□ -0.57
RAPGEF6-215ENST00000627212 HYPKQ9NX55 129 aa11.52□□□□□ -0.57
RAPGEF6-215ENST00000627212 CCDC196A0A1B0GTZ2 297 aa11.52□□□□□ -0.57
RAPGEF6-215ENST00000627212 MACROD2A1Z1Q3 448 aa11.52□□□□□ -0.57
RAPGEF6-215ENST00000627212 HLTFQ14527 1009 aaKnown RBP eCLIP11.52□□□□□ -0.579e-6■□□□□ 9.4
RAPGEF6-215ENST00000627212 IQCA1Q86XH1 822 aa11.52□□□□□ -0.57
RAPGEF6-215ENST00000627212 ARHGAP45Q92619 1136 aa11.52□□□□□ -0.57
RAPGEF6-215ENST00000627212 SMARCC1Q92922 1105 aaPredicted RBP11.52□□□□□ -0.57
RAPGEF6-215ENST00000627212 SYKP43405 635 aa11.51□□□□□ -0.57
RAPGEF6-215ENST00000627212 MTIF2P46199 727 aaKnown RBP11.51□□□□□ -0.57
RAPGEF6-215ENST00000627212 METAP2P50579 478 aaKnown RBP eCLIP11.51□□□□□ -0.57
RAPGEF6-215ENST00000627212 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.51□□□□□ -0.57
RAPGEF6-215ENST00000627212 KIAA0586Q9BVV6 1533 aa11.51□□□□□ -0.57
RAPGEF6-215ENST00000627212 MYO1BO43795 1136 aa11.51□□□□□ -0.57
RAPGEF6-215ENST00000627212 TYRO3Q06418 890 aa11.51□□□□□ -0.57
RAPGEF6-215ENST00000627212 RNF187Q5TA31 235 aaPredicted RBP11.51□□□□□ -0.57
RAPGEF6-215ENST00000627212 CEP85Q6P2H3 762 aa11.51□□□□□ -0.57
RAPGEF6-215ENST00000627212 Q6ZUG5 572 aa11.51□□□□□ -0.57
RAPGEF6-215ENST00000627212 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.51□□□□□ -0.57
RAPGEF6-215ENST00000627212 POLKQ9UBT6 870 aa11.51□□□□□ -0.57
RAPGEF6-215ENST00000627212 SBNO2Q9Y2G9 1366 aa11.51□□□□□ -0.57
RAPGEF6-215ENST00000627212 KAT6BQ8WYB5 2073 aa11.51□□□□□ -0.57
RAPGEF6-215ENST00000627212 CCDC194A0A1B0GVG4 234 aa11.51□□□□□ -0.57
RAPGEF6-215ENST00000627212 N4BP3O15049 544 aa11.51□□□□□ -0.57
RAPGEF6-215ENST00000627212 SPECC1Q5M775 1068 aa11.51□□□□□ -0.57
RAPGEF6-215ENST00000627212 FKBP15Q5T1M5 1219 aa11.51□□□□□ -0.57
RAPGEF6-215ENST00000627212 DRC1Q96MC2 740 aa11.51□□□□□ -0.57
RAPGEF6-215ENST00000627212 DCTPP1Q9H773 170 aa11.51□□□□□ -0.57
RAPGEF6-215ENST00000627212 TMOD3Q9NYL9 352 aa11.51□□□□□ -0.57
RAPGEF6-215ENST00000627212 NEMFO60524 1076 aa11.51□□□□□ -0.57
RAPGEF6-215ENST00000627212 CWF19L2Q2TBE0 894 aaKnown RBP11.51□□□□□ -0.57
RAPGEF6-215ENST00000627212 CCDC178Q5BJE1 867 aa11.51□□□□□ -0.57
RAPGEF6-215ENST00000627212 COPS6Q7L5N1 327 aa11.51□□□□□ -0.57
RAPGEF6-215ENST00000627212 IL16Q14005 1332 aa11.51□□□□□ -0.57
RAPGEF6-215ENST00000627212 NCKAP5LQ9HCH0 1330 aa11.51□□□□□ -0.57
RAPGEF6-215ENST00000627212 PAF1Q8N7H5 531 aa11.5□□□□□ -0.57
RAPGEF6-215ENST00000627212 PAFAH1B1P43034 410 aa11.5□□□□□ -0.57
RAPGEF6-215ENST00000627212 RBM25P49756 843 aaKnown RBP11.5□□□□□ -0.57
RAPGEF6-215ENST00000627212 DYDC1Q8WWB3 177 aa11.5□□□□□ -0.57
RAPGEF6-215ENST00000627212 SRRTQ9BXP5 876 aaKnown RBP11.5□□□□□ -0.57
RAPGEF6-215ENST00000627212 JADE2Q9NQC1 790 aa11.5□□□□□ -0.57
RAPGEF6-215ENST00000627212 CALCOCO1Q9P1Z2 691 aa11.5□□□□□ -0.57
RAPGEF6-215ENST00000627212 SHTN1A0MZ66 631 aa11.5□□□□□ -0.57
RAPGEF6-215ENST00000627212 YEATS4O95619 227 aa11.5□□□□□ -0.57
RAPGEF6-215ENST00000627212 AMOTQ4VCS5 1084 aa11.5□□□□□ -0.57
RAPGEF6-215ENST00000627212 XAGE3Q8WTP9 111 aa11.5□□□□□ -0.57
RAPGEF6-215ENST00000627212 PHACTR2O75167 634 aa11.5□□□□□ -0.57
RAPGEF6-215ENST00000627212 ATP8B2P98198 1209 aa11.5□□□□□ -0.57
RAPGEF6-215ENST00000627212 NMIQ13287 307 aaPredicted RBP11.5□□□□□ -0.57
RAPGEF6-215ENST00000627212 BMS1Q14692 1282 aaKnown RBP11.5□□□□□ -0.57
RAPGEF6-215ENST00000627212 TCERG1LQ5VWI1 586 aa11.5□□□□□ -0.57
RAPGEF6-215ENST00000627212 LMBR1LQ6UX01 489 aa11.5□□□□□ -0.57
RAPGEF6-215ENST00000627212 ANKRD13DQ6ZTN6 518 aa11.5□□□□□ -0.57
RAPGEF6-215ENST00000627212 GOPCQ9HD26 462 aa11.5□□□□□ -0.57
RAPGEF6-215ENST00000627212 RXRAP19793 462 aa11.49□□□□□ -0.57
RAPGEF6-215ENST00000627212 SYT1P21579 422 aa11.49□□□□□ -0.57
RAPGEF6-215ENST00000627212 GOLGA6L7A0A1B0GV03 622 aa11.49□□□□□ -0.57
RAPGEF6-215ENST00000627212 G2E3Q7L622 706 aa11.49□□□□□ -0.57
RAPGEF6-215ENST00000627212 TSC1Q92574 1164 aa11.49□□□□□ -0.57
RAPGEF6-215ENST00000627212 USP26Q9BXU7 913 aa11.49□□□□□ -0.57
RAPGEF6-215ENST00000627212 TMCO5BA8MYB1 307 aa11.49□□□□□ -0.57
RAPGEF6-215ENST00000627212 CALRP27797 417 aaKnown RBP11.49□□□□□ -0.57
RAPGEF6-215ENST00000627212 UBA7P41226 1012 aa11.49□□□□□ -0.57
RAPGEF6-215ENST00000627212 PRPF4BQ13523 1007 aaKnown RBP11.49□□□□□ -0.57
RAPGEF6-215ENST00000627212 CAVIN4Q5BKX8 364 aa11.49□□□□□ -0.57
RAPGEF6-215ENST00000627212 DZIP1Q86YF9 867 aaKnown RBP11.49□□□□□ -0.57
RAPGEF6-215ENST00000627212 PIK3R4Q99570 1358 aa11.49□□□□□ -0.57
RAPGEF6-215ENST00000627212 ATP2C2O75185 946 aa11.48□□□□□ -0.57
RAPGEF6-215ENST00000627212 STX17P56962 302 aa11.48□□□□□ -0.57
RAPGEF6-215ENST00000627212 KRT222Q8N1A0 295 aa11.48□□□□□ -0.57
RAPGEF6-215ENST00000627212 ALG1Q9BT22 464 aa11.48□□□□□ -0.57
RAPGEF6-215ENST00000627212 DHX29Q7Z478 1369 aaKnown RBP11.48□□□□□ -0.57
RAPGEF6-215ENST00000627212 IFFO1Q0D2I5 559 aa11.48□□□□□ -0.57
RAPGEF6-215ENST00000627212 EIF4A2Q14240 407 aaKnown RBP11.48□□□□□ -0.57
RAPGEF6-215ENST00000627212 TXLNBQ8N3L3 684 aa11.48□□□□□ -0.57
RAPGEF6-215ENST00000627212 NCOA7Q8NI08 942 aa11.48□□□□□ -0.57
RAPGEF6-215ENST00000627212 CHAMP1Q96JM3 812 aa11.48□□□□□ -0.57
RAPGEF6-215ENST00000627212 SEC63Q9UGP8 760 aaKnown RBP11.48□□□□□ -0.57
RAPGEF6-215ENST00000627212 ANKRD18BA2A2Z9 1011 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms