RNA–Protein interactions for RNA: ENST00000626584.2

TCF4-254, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 1,701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-254ENST00000626584 FOXD4L4Q8WXT5 416 aaPredicted RBP12.05□□□□□ -0.48
TCF4-254ENST00000626584 EAF2Q96CJ1 260 aaPredicted RBP12.05□□□□□ -0.48
TCF4-254ENST00000626584 CHAMP1Q96JM3 812 aa12.05□□□□□ -0.48
TCF4-254ENST00000626584 AFDNP55196 1824 aaKnown RBP12.05□□□□□ -0.48
TCF4-254ENST00000626584 ARFGEF2Q9Y6D5 1785 aa12.05□□□□□ -0.48
TCF4-254ENST00000626584 RFX7Q2KHR2 1363 aa12.04□□□□□ -0.48
TCF4-254ENST00000626584 GCKRQ14397 625 aa12.04□□□□□ -0.48
TCF4-254ENST00000626584 IFNL2Q8IZJ0 200 aa12.04□□□□□ -0.48
TCF4-254ENST00000626584 MAP4K1Q92918 833 aa12.04□□□□□ -0.48
TCF4-254ENST00000626584 ALDH8A1Q9H2A2 487 aaPredicted RBP12.04□□□□□ -0.48
TCF4-254ENST00000626584 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.04□□□□□ -0.48
TCF4-254ENST00000626584 PHF14O94880 888 aa12.03□□□□□ -0.48
TCF4-254ENST00000626584 CASTP20810 708 aaKnown RBP12.03□□□□□ -0.48
TCF4-254ENST00000626584 CDK11BP21127 795 aaKnown RBP12.03□□□□□ -0.48
TCF4-254ENST00000626584 XAGE3Q8WTP9 111 aa12.03□□□□□ -0.48
TCF4-254ENST00000626584 COPRSQ9NQ92 184 aa12.03□□□□□ -0.48
TCF4-254ENST00000626584 PDRG1Q9NUG6 133 aa12.03□□□□□ -0.48
TCF4-254ENST00000626584 SMC3Q9UQE7 1217 aa12.03□□□□□ -0.48
TCF4-254ENST00000626584 CYP46A1Q9Y6A2 500 aa12.03□□□□□ -0.48
TCF4-254ENST00000626584 TCHHQ07283 1943 aa12.03□□□□□ -0.48
TCF4-254ENST00000626584 MED23Q9ULK4 1368 aa12.03□□□□□ -0.48
TCF4-254ENST00000626584 SYCE3A1L190 88 aa12.03□□□□□ -0.48
TCF4-254ENST00000626584 STX6O43752 255 aa12.03□□□□□ -0.48
TCF4-254ENST00000626584 SNRPA1P09661 255 aaKnown RBP12.03□□□□□ -0.48
TCF4-254ENST00000626584 ZC3H6P61129 1189 aaKnown RBP12.03□□□□□ -0.48
TCF4-254ENST00000626584 AIMP1Q12904 312 aaKnown RBP12.03□□□□□ -0.48
TCF4-254ENST00000626584 SLC39A6Q13433 755 aa12.03□□□□□ -0.48
TCF4-254ENST00000626584 USP48Q86UV5 1035 aa12.03□□□□□ -0.48
TCF4-254ENST00000626584 DCAF5Q96JK2 942 aa12.03□□□□□ -0.48
TCF4-254ENST00000626584 ATP6V1DQ9Y5K8 247 aa12.03□□□□□ -0.48
TCF4-254ENST00000626584 STRCP1A6NGW2 1772 aa12.03□□□□□ -0.48
TCF4-254ENST00000626584 TNS3Q68CZ2 1445 aa12.02□□□□□ -0.48
TCF4-254ENST00000626584 CPDO75976 1380 aa12.02□□□□□ -0.48
TCF4-254ENST00000626584 F13A1P00488 732 aa12.02□□□□□ -0.49
TCF4-254ENST00000626584 ZKSCAN1P17029 563 aaPredicted RBP12.02□□□□□ -0.49
TCF4-254ENST00000626584 SYT1P21579 422 aa12.02□□□□□ -0.49
TCF4-254ENST00000626584 BRD2P25440 801 aaKnown RBP12.02□□□□□ -0.49
TCF4-254ENST00000626584 NMIQ13287 307 aaPredicted RBP12.02□□□□□ -0.49
TCF4-254ENST00000626584 TSGA10IPQ3SY00 556 aa12.02□□□□□ -0.49
TCF4-254ENST00000626584 RABL6Q3YEC7 729 aaPredicted RBP12.02□□□□□ -0.49
TCF4-254ENST00000626584 CREB3L3Q68CJ9 461 aa12.02□□□□□ -0.49
TCF4-254ENST00000626584 PRPF40BQ6NWY9 871 aaKnown RBP12.02□□□□□ -0.49
TCF4-254ENST00000626584 JAKMIP1Q96N16 626 aaKnown RBP12.02□□□□□ -0.49
TCF4-254ENST00000626584 TSPY26PQ9H489 355 aa12.02□□□□□ -0.49
TCF4-254ENST00000626584 NLRP2Q9NX02 1062 aa12.02□□□□□ -0.49
TCF4-254ENST00000626584 RBM8AQ9Y5S9 174 aaKnown RBP12.02□□□□□ -0.49
TCF4-254ENST00000626584 LETM1O95202 739 aaPredicted RBP12.01□□□□□ -0.49
TCF4-254ENST00000626584 LARGE1O95461 756 aa12.01□□□□□ -0.49
TCF4-254ENST00000626584 PSMA5P28066 241 aa12.01□□□□□ -0.49
TCF4-254ENST00000626584 RFX5P48382 616 aaPredicted RBP12.01□□□□□ -0.49
TCF4-254ENST00000626584 ADCK5Q3MIX3 580 aa12.01□□□□□ -0.49
TCF4-254ENST00000626584 SAMD1Q6SPF0 538 aaPredicted RBP12.01□□□□□ -0.49
TCF4-254ENST00000626584 COPS6Q7L5N1 327 aa12.01□□□□□ -0.49
TCF4-254ENST00000626584 NFATC2IPQ8NCF5 419 aa12.01□□□□□ -0.49
TCF4-254ENST00000626584 ZNF496Q96IT1 587 aaPredicted RBP12.01□□□□□ -0.49
TCF4-254ENST00000626584 MYD88Q99836 296 aa12.01□□□□□ -0.49
TCF4-254ENST00000626584 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.01□□□□□ -0.49
TCF4-254ENST00000626584 SLC27A2O14975 620 aa12□□□□□ -0.49
TCF4-254ENST00000626584 GADD45BO75293 160 aaPredicted RBP12□□□□□ -0.49
TCF4-254ENST00000626584 ATF3P18847 181 aa12□□□□□ -0.49
TCF4-254ENST00000626584 UVSSAQ2YD98 709 aa12□□□□□ -0.49
TCF4-254ENST00000626584 TAF7LQ5H9L4 462 aa12□□□□□ -0.49
TCF4-254ENST00000626584 ANKRD13DQ6ZTN6 518 aa12□□□□□ -0.49
TCF4-254ENST00000626584 FMNL2Q96PY5 1086 aa12□□□□□ -0.49
TCF4-254ENST00000626584 CCDC8Q9H0W5 538 aaPredicted RBP12□□□□□ -0.49
TCF4-254ENST00000626584 NOL7Q9UMY1 257 aaKnown RBP12□□□□□ -0.49
TCF4-254ENST00000626584 TMEM94Q12767 1356 aa12□□□□□ -0.49
TCF4-254ENST00000626584 UBR2Q8IWV8 1755 aa12□□□□□ -0.49
TCF4-254ENST00000626584 ATP5JP18859 108 aa12□□□□□ -0.49
TCF4-254ENST00000626584 MCM5P33992 734 aa12□□□□□ -0.49
TCF4-254ENST00000626584 UBE2HP62256 183 aa12□□□□□ -0.49
TCF4-254ENST00000626584 ANKRD1Q15327 319 aa12□□□□□ -0.49
TCF4-254ENST00000626584 CSPP1Q1MSJ5 1256 aa12□□□□□ -0.49
TCF4-254ENST00000626584 EPHA10Q5JZY3 1008 aa12□□□□□ -0.49
TCF4-254ENST00000626584 CCDC183Q5T5S1 534 aa12□□□□□ -0.49
TCF4-254ENST00000626584 TICAM2Q86XR7 235 aa12□□□□□ -0.49
TCF4-254ENST00000626584 FAM227BQ96M60 508 aa12□□□□□ -0.49
TCF4-254ENST00000626584 TLR7Q9NYK1 1049 aaKnown RBP12□□□□□ -0.49
TCF4-254ENST00000626584 HMG20BQ9P0W2 317 aa12□□□□□ -0.49
TCF4-254ENST00000626584 MTMR6Q9Y217 621 aa12□□□□□ -0.49
TCF4-254ENST00000626584 PAPPAQ13219 1627 aa11.99□□□□□ -0.49
TCF4-254ENST00000626584 NUP188Q5SRE5 1749 aa11.99□□□□□ -0.49
TCF4-254ENST00000626584 CYP27B1O15528 508 aa11.99□□□□□ -0.49
TCF4-254ENST00000626584 MYL6BP14649 208 aa11.99□□□□□ -0.49
TCF4-254ENST00000626584 CPA1P15085 419 aa11.99□□□□□ -0.49
TCF4-254ENST00000626584 GJB2P29033 226 aa11.99□□□□□ -0.49
TCF4-254ENST00000626584 CASP7P55210 303 aa11.99□□□□□ -0.49
TCF4-254ENST00000626584 ST3GAL1Q11201 340 aa11.99□□□□□ -0.49
TCF4-254ENST00000626584 RNF20Q5VTR2 975 aa11.99□□□□□ -0.49
TCF4-254ENST00000626584 USPL1Q5W0Q7 1092 aa11.99□□□□□ -0.49
TCF4-254ENST00000626584 CCDC83Q8IWF9 413 aa11.99□□□□□ -0.49
TCF4-254ENST00000626584 TTC5Q8N0Z6 440 aa11.99□□□□□ -0.49
TCF4-254ENST00000626584 FAM184AQ8NB25 1140 aa11.99□□□□□ -0.49
TCF4-254ENST00000626584 DNAJC5Q9H3Z4 198 aa11.99□□□□□ -0.49
TCF4-254ENST00000626584 USP16Q9Y5T5 823 aa11.99□□□□□ -0.49
TCF4-254ENST00000626584 A0A0D9SFI3 127 aa11.98□□□□□ -0.49
TCF4-254ENST00000626584 ZNF500O60304 480 aaPredicted RBP11.98□□□□□ -0.49
TCF4-254ENST00000626584 PTPN12Q05209 780 aaKnown RBP11.98□□□□□ -0.49
TCF4-254ENST00000626584 FSD1Q9BTV5 496 aa11.98□□□□□ -0.49
TCF4-254ENST00000626584 BOLA2Q9H3K6 86 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms