RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 ZSCAN25Q6NSZ9 544 aa6.55□□□□□ -1.36
ERCC6-213ENST00000624341 NCKAP5LQ9HCH0 1330 aa6.55□□□□□ -1.36
ERCC6-213ENST00000624341 NEFHP12036 1026 aa6.55□□□□□ -1.36
ERCC6-213ENST00000624341 ATP2B2Q01814 1243 aa6.55□□□□□ -1.36
ERCC6-213ENST00000624341 ANKLE2Q86XL3 938 aa6.55□□□□□ -1.36
ERCC6-213ENST00000624341 CCDC148Q8NFR7 591 aa6.55□□□□□ -1.36
ERCC6-213ENST00000624341 SNX21Q969T3 373 aa6.55□□□□□ -1.36
ERCC6-213ENST00000624341 ZFP91Q96JP5 570 aaPredicted RBP6.55□□□□□ -1.36
ERCC6-213ENST00000624341 ZSCAN22P10073 491 aaPredicted RBP6.55□□□□□ -1.36
ERCC6-213ENST00000624341 IQCEQ6IPM2 695 aa6.55□□□□□ -1.36
ERCC6-213ENST00000624341 MPHOSPH8Q99549 860 aa6.55□□□□□ -1.36
ERCC6-213ENST00000624341 MEIS3Q99687 375 aa6.55□□□□□ -1.36
ERCC6-213ENST00000624341 RAI14Q9P0K7 980 aa6.55□□□□□ -1.36
ERCC6-213ENST00000624341 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.55□□□□□ -1.36
ERCC6-213ENST00000624341 V9GYY5 206 aaPredicted RBP6.55□□□□□ -1.36
ERCC6-213ENST00000624341 RAB3GAP1Q15042 981 aa6.55□□□□□ -1.36
ERCC6-213ENST00000624341 SYCP1Q15431 976 aa6.55□□□□□ -1.36
ERCC6-213ENST00000624341 ZGPATQ8N5A5 531 aaKnown RBP6.55□□□□□ -1.36
ERCC6-213ENST00000624341 STRN4Q9NRL3 753 aa6.55□□□□□ -1.36
ERCC6-213ENST00000624341 POLR3DP05423 398 aaPredicted RBP6.54□□□□□ -1.36
ERCC6-213ENST00000624341 GSDMDP57764 484 aa6.54□□□□□ -1.36
ERCC6-213ENST00000624341 USHBP1Q8N6Y0 703 aa6.54□□□□□ -1.36
ERCC6-213ENST00000624341 DNAAF4Q8WXU2 420 aa6.54□□□□□ -1.36
ERCC6-213ENST00000624341 ECHDC1Q9NTX5 307 aa6.54□□□□□ -1.36
ERCC6-213ENST00000624341 DNA2P51530 1060 aa6.54□□□□□ -1.36
ERCC6-213ENST00000624341 STX1AQ16623 288 aa6.54□□□□□ -1.36
ERCC6-213ENST00000624341 CNNM3Q8NE01 707 aa6.54□□□□□ -1.36
ERCC6-213ENST00000624341 AIDAQ96BJ3 306 aa6.54□□□□□ -1.36
ERCC6-213ENST00000624341 LMAN1P49257 510 aa6.54□□□□□ -1.36
ERCC6-213ENST00000624341 BMS1Q14692 1282 aaKnown RBP6.54□□□□□ -1.36
ERCC6-213ENST00000624341 PPP1R42Q7Z4L9 355 aa6.54□□□□□ -1.36
ERCC6-213ENST00000624341 GNL3LQ9NVN8 582 aaKnown RBP6.54□□□□□ -1.36
ERCC6-213ENST00000624341 UGGT1Q9NYU2 1555 aa6.54□□□□□ -1.36
ERCC6-213ENST00000624341 IFIT1P09914 478 aaKnown RBP6.54□□□□□ -1.36
ERCC6-213ENST00000624341 SKILP12757 684 aa6.54□□□□□ -1.36
ERCC6-213ENST00000624341 GNG11P61952 73 aa6.54□□□□□ -1.36
ERCC6-213ENST00000624341 ANO6Q4KMQ2 910 aa6.54□□□□□ -1.36
ERCC6-213ENST00000624341 RAB11FIP4Q86YS3 637 aa6.54□□□□□ -1.36
ERCC6-213ENST00000624341 SMC5Q8IY18 1101 aa6.54□□□□□ -1.36
ERCC6-213ENST00000624341 WASF1Q92558 559 aa6.54□□□□□ -1.36
ERCC6-213ENST00000624341 PAXBP1Q9Y5B6 917 aa6.54□□□□□ -1.36
ERCC6-213ENST00000624341 SYNMO15061 1565 aa6.54□□□□□ -1.36
ERCC6-213ENST00000624341 PDE1AP54750 535 aa6.54□□□□□ -1.36
ERCC6-213ENST00000624341 SOGA3Q5TF21 947 aa6.54□□□□□ -1.36
ERCC6-213ENST00000624341 GOLGA6L7A0A1B0GV03 622 aa6.53□□□□□ -1.36
ERCC6-213ENST00000624341 SHTN1A0MZ66 631 aa6.53□□□□□ -1.36
ERCC6-213ENST00000624341 DNM1Q05193 864 aaKnown RBP6.53□□□□□ -1.36
ERCC6-213ENST00000624341 ENOX2Q16206 610 aaKnown RBP6.53□□□□□ -1.36
ERCC6-213ENST00000624341 KRT222Q8N1A0 295 aa6.53□□□□□ -1.36
ERCC6-213ENST00000624341 MYD88Q99836 296 aa6.53□□□□□ -1.36
ERCC6-213ENST00000624341 SEPT11Q9NVA2 429 aaKnown RBP6.53□□□□□ -1.36
ERCC6-213ENST00000624341 DACT1Q9NYF0 836 aa6.53□□□□□ -1.36
ERCC6-213ENST00000624341 LRP2BPQ9P2M1 347 aa6.53□□□□□ -1.36
ERCC6-213ENST00000624341 ABCF2Q9UG63 623 aa6.53□□□□□ -1.36
ERCC6-213ENST00000624341 PTPRCP08575 1304 aa6.53□□□□□ -1.36
ERCC6-213ENST00000624341 FAM200AQ8TCP9 573 aa6.53□□□□□ -1.36
ERCC6-213ENST00000624341 IQGAP1P46940 1657 aa6.53□□□□□ -1.36
ERCC6-213ENST00000624341 GOLGA8BA8MQT2 603 aa6.53□□□□□ -1.36
ERCC6-213ENST00000624341 LARP1Q6PKG0 1096 aaKnown RBP6.53□□□□□ -1.36
ERCC6-213ENST00000624341 TXLNBQ8N3L3 684 aa6.53□□□□□ -1.36
ERCC6-213ENST00000624341 TAF4BQ92750 862 aa6.53□□□□□ -1.36
ERCC6-213ENST00000624341 EVI5LQ96CN4 794 aa6.53□□□□□ -1.36
ERCC6-213ENST00000624341 ABCC3O15438 1527 aa6.53□□□□□ -1.36
ERCC6-213ENST00000624341 MED14O60244 1454 aa6.53□□□□□ -1.36
ERCC6-213ENST00000624341 SPA17Q15506 151 aa6.53□□□□□ -1.36
ERCC6-213ENST00000624341 HSP90AA4PQ58FG1 418 aa6.53□□□□□ -1.36
ERCC6-213ENST00000624341 ZBTB9Q96C00 473 aa6.53□□□□□ -1.36
ERCC6-213ENST00000624341 NUP88Q99567 741 aaPredicted RBP6.53□□□□□ -1.36
ERCC6-213ENST00000624341 CEP131Q9UPN4 1083 aa6.53□□□□□ -1.36
ERCC6-213ENST00000624341 MINDY4BA8MYZ0 360 aa6.52□□□□□ -1.37
ERCC6-213ENST00000624341 ANXA1P04083 346 aa6.52□□□□□ -1.37
ERCC6-213ENST00000624341 HMGB1P09429 215 aaKnown RBP6.52□□□□□ -1.37
ERCC6-213ENST00000624341 ZC3H6P61129 1189 aaKnown RBP6.52□□□□□ -1.37
ERCC6-213ENST00000624341 ESYT1Q9BSJ8 1104 aa6.52□□□□□ -1.37
ERCC6-213ENST00000624341 LRRC2Q9BYS8 371 aa6.52□□□□□ -1.37
ERCC6-213ENST00000624341 DNAJC25Q9H1X3 360 aa6.52□□□□□ -1.37
ERCC6-213ENST00000624341 NPHP4O75161 1426 aaPredicted RBP6.52□□□□□ -1.37
ERCC6-213ENST00000624341 TOM1O60784 492 aa6.52□□□□□ -1.37
ERCC6-213ENST00000624341 MAP9Q49MG5 647 aa6.52□□□□□ -1.37
ERCC6-213ENST00000624341 METTL24Q5JXM2 366 aa6.52□□□□□ -1.37
ERCC6-213ENST00000624341 MPRIPQ6WCQ1 1025 aa6.52□□□□□ -1.37
ERCC6-213ENST00000624341 SMARCC1Q92922 1105 aaPredicted RBP6.52□□□□□ -1.37
ERCC6-213ENST00000624341 BMP2KQ9NSY1 1161 aaPredicted RBP6.52□□□□□ -1.37
ERCC6-213ENST00000624341 DNAI1Q9UI46 699 aa6.52□□□□□ -1.37
ERCC6-213ENST00000624341 ANKRD62A6NC57 917 aa6.52□□□□□ -1.37
ERCC6-213ENST00000624341 PTCD1O75127 700 aaKnown RBP6.52□□□□□ -1.37
ERCC6-213ENST00000624341 HAND2P61296 217 aa6.52□□□□□ -1.37
ERCC6-213ENST00000624341 TOM1L2Q6ZVM7 507 aa6.52□□□□□ -1.37
ERCC6-213ENST00000624341 CCDC12Q8WUD4 166 aaPredicted RBP6.52□□□□□ -1.37
ERCC6-213ENST00000624341 BRF1Q92994 677 aa6.52□□□□□ -1.37
ERCC6-213ENST00000624341 NEK1Q96PY6 1258 aa6.52□□□□□ -1.37
ERCC6-213ENST00000624341 USP16Q9Y5T5 823 aa6.52□□□□□ -1.37
ERCC6-213ENST00000624341 PARD3Q8TEW0 1356 aa6.52□□□□□ -1.37
ERCC6-213ENST00000624341 LMTK2Q8IWU2 1503 aa6.52□□□□□ -1.37
ERCC6-213ENST00000624341 PI4KAP2A4QPH2 592 aa6.52□□□□□ -1.37
ERCC6-213ENST00000624341 PROSER2Q86WR7 435 aaPredicted RBP6.52□□□□□ -1.37
ERCC6-213ENST00000624341 PI4KAP1Q8N8J0 262 aa6.52□□□□□ -1.37
ERCC6-213ENST00000624341 ZNF397Q8NF99 534 aaPredicted RBP6.52□□□□□ -1.37
ERCC6-213ENST00000624341 RHPN1Q8TCX5 695 aa6.52□□□□□ -1.37
ERCC6-213ENST00000624341 IPO4Q8TEX9 1081 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms