RNA–Protein interactions for RNA: ENST00000623610.1

CDKL5-206, Transcript of cyclin dependent kinase like 5, humanhuman

Gene CDKL5, Length 2,130 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-206ENST00000623610 DAPK1P53355 1430 aa10.4□□□□□ -0.74
CDKL5-206ENST00000623610 ENPP3O14638 875 aa10.4□□□□□ -0.74
CDKL5-206ENST00000623610 KCNA2P16389 499 aa10.4□□□□□ -0.74
CDKL5-206ENST00000623610 ANP32AP39687 249 aaKnown RBP10.4□□□□□ -0.74
CDKL5-206ENST00000623610 GMLQ99445 158 aa10.4□□□□□ -0.74
CDKL5-206ENST00000623610 PAIP2Q9BPZ3 127 aaKnown RBP10.4□□□□□ -0.74
CDKL5-206ENST00000623610 ARNT2Q9HBZ2 717 aa10.4□□□□□ -0.74
CDKL5-206ENST00000623610 CLIC5Q9NZA1 410 aa10.4□□□□□ -0.74
CDKL5-206ENST00000623610 DNMT1P26358 1616 aaKnown RBP10.39□□□□□ -0.75
CDKL5-206ENST00000623610 PPP4R4Q6NUP7 873 aa10.39□□□□□ -0.75
CDKL5-206ENST00000623610 LMNTD2Q8IXW0 634 aa10.39□□□□□ -0.75
CDKL5-206ENST00000623610 CD248Q9HCU0 757 aa10.39□□□□□ -0.75
CDKL5-206ENST00000623610 PTPRHQ9HD43 1115 aa10.39□□□□□ -0.75
CDKL5-206ENST00000623610 IP6K2Q9UHH9 426 aa10.39□□□□□ -0.75
CDKL5-206ENST00000623610 POLG2Q9UHN1 485 aa10.39□□□□□ -0.75
CDKL5-206ENST00000623610 CROCC2H7BZ55 1655 aa10.39□□□□□ -0.75
CDKL5-206ENST00000623610 TRIM64CA6NLI5 447 aa10.39□□□□□ -0.75
CDKL5-206ENST00000623610 SLC26A4O43511 780 aa10.39□□□□□ -0.75
CDKL5-206ENST00000623610 NAP1L1P55209 391 aaKnown RBP10.39□□□□□ -0.75
CDKL5-206ENST00000623610 CAMK2BQ13554 666 aa10.39□□□□□ -0.75
CDKL5-206ENST00000623610 INO80DQ53TQ3 878 aaPredicted RBP10.39□□□□□ -0.75
CDKL5-206ENST00000623610 MSL1Q68DK7 614 aa10.39□□□□□ -0.75
CDKL5-206ENST00000623610 ANKRD13DQ6ZTN6 518 aa10.39□□□□□ -0.75
CDKL5-206ENST00000623610 ANKRD13BQ86YJ7 626 aa10.39□□□□□ -0.75
CDKL5-206ENST00000623610 SLF2Q8IX21 1173 aa10.39□□□□□ -0.75
CDKL5-206ENST00000623610 CFAP53Q96M91 514 aa10.39□□□□□ -0.75
CDKL5-206ENST00000623610 TGIF2Q9GZN2 237 aa10.39□□□□□ -0.75
CDKL5-206ENST00000623610 ENAMQ9NRM1 1142 aa10.39□□□□□ -0.75
CDKL5-206ENST00000623610 CHIC2Q9UKJ5 165 aa10.39□□□□□ -0.75
CDKL5-206ENST00000623610 MAST1Q9Y2H9 1570 aa10.38□□□□□ -0.75
CDKL5-206ENST00000623610 DHX29Q7Z478 1369 aaKnown RBP10.38□□□□□ -0.75
CDKL5-206ENST00000623610 ERICH4A6NGS2 130 aa10.38□□□□□ -0.75
CDKL5-206ENST00000623610 PPFIA3O75145 1194 aa10.38□□□□□ -0.75
CDKL5-206ENST00000623610 XRCC5P13010 732 aaKnown RBP10.38□□□□□ -0.75
CDKL5-206ENST00000623610 CDC27P30260 824 aa10.38□□□□□ -0.75
CDKL5-206ENST00000623610 CASQ1P31415 396 aa10.38□□□□□ -0.75
CDKL5-206ENST00000623610 GGT6Q6P531 493 aa10.38□□□□□ -0.75
CDKL5-206ENST00000623610 TAS1R3Q7RTX0 852 aa10.38□□□□□ -0.75
CDKL5-206ENST00000623610 REM2Q8IYK8 340 aaPredicted RBP10.38□□□□□ -0.75
CDKL5-206ENST00000623610 NDUFAF2Q8N183 169 aa10.38□□□□□ -0.75
CDKL5-206ENST00000623610 NUTM2FA1L443 756 aa10.37□□□□□ -0.75
CDKL5-206ENST00000623610 IPO5O00410 1097 aaKnown RBP10.37□□□□□ -0.75
CDKL5-206ENST00000623610 GNPATO15228 680 aa10.37□□□□□ -0.75
CDKL5-206ENST00000623610 NDUFV2P19404 249 aa10.37□□□□□ -0.75
CDKL5-206ENST00000623610 TMEM95Q3KNT9 176 aa10.37□□□□□ -0.75
CDKL5-206ENST00000623610 UBE2Q1Q7Z7E8 422 aa10.37□□□□□ -0.75
CDKL5-206ENST00000623610 C22orf23Q9BZE7 217 aa10.37□□□□□ -0.75
CDKL5-206ENST00000623610 TSPYL2Q9H2G4 693 aaPredicted RBP10.37□□□□□ -0.75
CDKL5-206ENST00000623610 TYW1Q9NV66 732 aaKnown RBP10.37□□□□□ -0.75
CDKL5-206ENST00000623610 TMEM63CQ9P1W3 806 aa10.37□□□□□ -0.75
CDKL5-206ENST00000623610 EIF5P55010 431 aaKnown RBP10.37□□□□□ -0.75
CDKL5-206ENST00000623610 GPSM2P81274 684 aa10.37□□□□□ -0.75
CDKL5-206ENST00000623610 MFSD10Q14728 455 aa10.37□□□□□ -0.75
CDKL5-206ENST00000623610 SEPT2Q15019 361 aa10.37□□□□□ -0.75
CDKL5-206ENST00000623610 MFSD4BQ5TF39 518 aa10.37□□□□□ -0.75
CDKL5-206ENST00000623610 MYSM1Q5VVJ2 828 aa10.37□□□□□ -0.75
CDKL5-206ENST00000623610 GOLGA1Q92805 767 aa10.37□□□□□ -0.75
CDKL5-206ENST00000623610 AKT1S1Q96B36 256 aa10.37□□□□□ -0.75
CDKL5-206ENST00000623610 FRMD6Q96NE9 622 aa10.37□□□□□ -0.75
CDKL5-206ENST00000623610 ODF2LQ9ULJ1 636 aa10.37□□□□□ -0.75
CDKL5-206ENST00000623610 MRPS23Q9Y3D9 190 aaKnown RBP10.37□□□□□ -0.75
CDKL5-206ENST00000623610 SHANK2Q9UPX8 1470 aa10.36□□□□□ -0.75
CDKL5-206ENST00000623610 CCDC163A0A0D9SF12 145 aa10.36□□□□□ -0.75
CDKL5-206ENST00000623610 KIF3BO15066 747 aa10.36□□□□□ -0.75
CDKL5-206ENST00000623610 COQ9O75208 318 aa10.36□□□□□ -0.75
CDKL5-206ENST00000623610 IFT88Q13099 833 aa10.36□□□□□ -0.75
CDKL5-206ENST00000623610 DIEXFQ68CQ4 756 aaKnown RBP10.36□□□□□ -0.75
CDKL5-206ENST00000623610 MYRIPQ8NFW9 859 aa10.36□□□□□ -0.75
CDKL5-206ENST00000623610 RRP7BPQ9NSQ0 103 aa10.36□□□□□ -0.75
CDKL5-206ENST00000623610 RBM28Q9NW13 759 aaKnown RBP10.36□□□□□ -0.75
CDKL5-206ENST00000623610 EVLQ9UI08 416 aaPredicted RBP10.36□□□□□ -0.75
CDKL5-206ENST00000623610 ACAD8Q9UKU7 415 aa10.36□□□□□ -0.75
CDKL5-206ENST00000623610 TMCC3Q9ULS5 477 aa10.36□□□□□ -0.75
CDKL5-206ENST00000623610 MAFBQ9Y5Q3 323 aaPredicted RBP10.36□□□□□ -0.75
CDKL5-206ENST00000623610 A6NJY4 79 aa10.36□□□□□ -0.75
CDKL5-206ENST00000623610 CD151P48509 253 aa10.36□□□□□ -0.75
CDKL5-206ENST00000623610 CEBPAP49715 358 aaPredicted RBP10.36□□□□□ -0.75
CDKL5-206ENST00000623610 TMEM87AQ8NBN3 555 aa10.36□□□□□ -0.75
CDKL5-206ENST00000623610 CCDC34Q96HJ3 373 aa10.36□□□□□ -0.75
CDKL5-206ENST00000623610 FAM161BQ96MY7 647 aa10.36□□□□□ -0.75
CDKL5-206ENST00000623610 BEGAINQ9BUH8 593 aa10.36□□□□□ -0.75
CDKL5-206ENST00000623610 PHF8Q9UPP1 1060 aa10.36□□□□□ -0.75
CDKL5-206ENST00000623610 KRT18P05783 430 aaKnown RBP10.35□□□□□ -0.75
CDKL5-206ENST00000623610 LRRC41Q15345 812 aa10.35□□□□□ -0.75
CDKL5-206ENST00000623610 SLC4A8Q2Y0W8 1093 aa10.35□□□□□ -0.75
CDKL5-206ENST00000623610 PODNQ7Z5L7 613 aa10.35□□□□□ -0.75
CDKL5-206ENST00000623610 CHMP3Q9Y3E7 222 aa10.35□□□□□ -0.75
CDKL5-206ENST00000623610 PABPN1LA6NDY0 278 aaKnown RBP10.34□□□□□ -0.75
CDKL5-206ENST00000623610 ITGAEP38570 1179 aa10.34□□□□□ -0.75
CDKL5-206ENST00000623610 FANCCQ00597 558 aa10.34□□□□□ -0.75
CDKL5-206ENST00000623610 Q3C1V9 767 aa10.34□□□□□ -0.75
CDKL5-206ENST00000623610 C16orf87Q6PH81 154 aa10.34□□□□□ -0.75
CDKL5-206ENST00000623610 TEX19Q8NA77 164 aa10.34□□□□□ -0.75
CDKL5-206ENST00000623610 RNPC3Q96LT9 517 aaKnown RBP10.34□□□□□ -0.75
CDKL5-206ENST00000623610 PDGFDQ9GZP0 370 aaPredicted RBP10.34□□□□□ -0.75
CDKL5-206ENST00000623610 ESF1Q9H501 851 aaKnown RBP10.34□□□□□ -0.75
CDKL5-206ENST00000623610 KMT5AQ9NQR1 393 aa10.34□□□□□ -0.75
CDKL5-206ENST00000623610 KIF15Q9NS87 1388 aa10.34□□□□□ -0.75
CDKL5-206ENST00000623610 PTPRKQ15262 1439 aa10.34□□□□□ -0.75
CDKL5-206ENST00000623610 CAND2O75155 1236 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms