RNA–Protein interactions for RNA: ENST00000623478.1

PCDHB4-202, Transcript of protocadherin beta 4, humanhuman

TSL 1 (best)

Gene PCDHB4, Length 1,206 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-202ENST00000623478 UTP14AQ9BVJ6 771 aaKnown RBP27.12■■□□□ 1.93
PCDHB4-202ENST00000623478 CCDC88AQ3V6T2 1871 aa27.12■■□□□ 1.93
PCDHB4-202ENST00000623478 TCIRG1Q13488 830 aa27.11■■□□□ 1.93
PCDHB4-202ENST00000623478 NLRP10Q86W26 655 aa27.11■■□□□ 1.93
PCDHB4-202ENST00000623478 TAOK3Q9H2K8 898 aa27.11■■□□□ 1.93
PCDHB4-202ENST00000623478 HYPKQ9NX55 129 aa27.11■■□□□ 1.93
PCDHB4-202ENST00000623478 SOGA3Q5TF21 947 aa27.1■■□□□ 1.93
PCDHB4-202ENST00000623478 PLBD2Q8NHP8 589 aa27.1■■□□□ 1.93
PCDHB4-202ENST00000623478 ZNF428Q96B54 188 aa27.1■■□□□ 1.93
PCDHB4-202ENST00000623478 TSPYL6Q8N831 410 aa27.09■■□□□ 1.93
PCDHB4-202ENST00000623478 RPGRQ92834 1020 aaKnown RBP27.09■■□□□ 1.93
PCDHB4-202ENST00000623478 SALL2Q9Y467 1007 aaPredicted RBP27.09■■□□□ 1.93
PCDHB4-202ENST00000623478 LTBP3Q9NS15 1303 aa27.09■■□□□ 1.93
PCDHB4-202ENST00000623478 ZC3H4Q9UPT8 1303 aaKnown RBP27.09■■□□□ 1.93
PCDHB4-202ENST00000623478 CCDC93Q567U6 631 aa27.08■■□□□ 1.93
PCDHB4-202ENST00000623478 ANKRD13DQ6ZTN6 518 aa27.08■■□□□ 1.93
PCDHB4-202ENST00000623478 FAM9BQ8IZU0 186 aa27.08■■□□□ 1.93
PCDHB4-202ENST00000623478 KDM2BQ8NHM5 1336 aa27.08■■□□□ 1.93
PCDHB4-202ENST00000623478 CEP350Q5VT06 3117 aa27.07■■□□□ 1.92
PCDHB4-202ENST00000623478 ALDH1B1P30837 517 aa27.07■■□□□ 1.92
PCDHB4-202ENST00000623478 SYNE4Q8N205 404 aa27.07■■□□□ 1.92
PCDHB4-202ENST00000623478 HOXA10P31260 410 aaPredicted RBP27.06■■□□□ 1.92
PCDHB4-202ENST00000623478 PHAXQ9H814 394 aaKnown RBP27.06■■□□□ 1.92
PCDHB4-202ENST00000623478 NCBP3Q53F19 620 aaKnown RBP27.05■■□□□ 1.92
PCDHB4-202ENST00000623478 SLC10A5Q5PT55 438 aa27.05■■□□□ 1.92
PCDHB4-202ENST00000623478 RNF123Q5XPI4 1314 aa27.05■■□□□ 1.92
PCDHB4-202ENST00000623478 ATP5J2-PTCD1G3V325 749 aa27.04■■□□□ 1.92
PCDHB4-202ENST00000623478 SLC51AQ86UW1 340 aa27.04■■□□□ 1.92
PCDHB4-202ENST00000623478 NLRP3Q96P20 1036 aa27.04■■□□□ 1.92
PCDHB4-202ENST00000623478 TRMT112Q9UI30 125 aaKnown RBP27.04■■□□□ 1.92
PCDHB4-202ENST00000623478 IL16Q14005 1332 aa27.04■■□□□ 1.92
PCDHB4-202ENST00000623478 DICER1Q9UPY3 1922 aaKnown RBP27.04■■□□□ 1.92
PCDHB4-202ENST00000623478 HCLS1P14317 486 aaPredicted RBP27.03■■□□□ 1.92
PCDHB4-202ENST00000623478 ISCA1Q9BUE6 129 aa27.03■■□□□ 1.92
PCDHB4-202ENST00000623478 LAMB2P55268 1798 aa27.02■■□□□ 1.92
PCDHB4-202ENST00000623478 SNED1Q8TER0 1413 aa27.02■■□□□ 1.92
PCDHB4-202ENST00000623478 SH3TC1Q8TE82 1336 aa27.02■■□□□ 1.92
PCDHB4-202ENST00000623478 RBM17Q96I25 401 aaKnown RBP27.02■■□□□ 1.92
PCDHB4-202ENST00000623478 RRAGCQ9HB90 399 aa27.02■■□□□ 1.92
PCDHB4-202ENST00000623478 GLTPD2A6NH11 291 aa27.01■■□□□ 1.91
PCDHB4-202ENST00000623478 GOLGA2Q08379 1002 aa27.01■■□□□ 1.91
PCDHB4-202ENST00000623478 CCDC30Q5VVM6 783 aa27.01■■□□□ 1.91
PCDHB4-202ENST00000623478 RIC3Q7Z5B4 369 aa27.01■■□□□ 1.91
PCDHB4-202ENST00000623478 FANCIQ9NVI1 1328 aa27■■□□□ 1.91
PCDHB4-202ENST00000623478 TCERG1O14776 1098 aaKnown RBP27■■□□□ 1.91
PCDHB4-202ENST00000623478 FKBP4Q02790 459 aaKnown RBP eCLIP27■■□□□ 1.91
PCDHB4-202ENST00000623478 RTKN2Q8IZC4 609 aa27■■□□□ 1.91
PCDHB4-202ENST00000623478 CRAMP1Q96RY5 1269 aa27■■□□□ 1.91
PCDHB4-202ENST00000623478 ZNF277Q9NRM2 450 aaPredicted RBP27■■□□□ 1.91
PCDHB4-202ENST00000623478 TOMM70O94826 608 aa26.99■■□□□ 1.91
PCDHB4-202ENST00000623478 TWISTNBQ3B726 338 aaPredicted RBP26.99■■□□□ 1.91
PCDHB4-202ENST00000623478 PPEF1O14829 653 aaPredicted RBP26.98■■□□□ 1.91
PCDHB4-202ENST00000623478 WDR63Q8IWG1 891 aa26.98■■□□□ 1.91
PCDHB4-202ENST00000623478 DDX60Q8IY21 1712 aaKnown RBP26.98■■□□□ 1.91
PCDHB4-202ENST00000623478 ABCC4O15439 1325 aa26.97■■□□□ 1.91
PCDHB4-202ENST00000623478 FAM89AQ96GI7 184 aa26.97■■□□□ 1.91
PCDHB4-202ENST00000623478 RTL5Q5HYW3 569 aaPredicted RBP26.96■■□□□ 1.91
PCDHB4-202ENST00000623478 CHMP4AQ9BY43 222 aa26.96■■□□□ 1.91
PCDHB4-202ENST00000623478 C16orf71Q8IYS4 520 aaPredicted RBP26.95■■□□□ 1.9
PCDHB4-202ENST00000623478 MYD88Q99836 296 aa26.95■■□□□ 1.9
PCDHB4-202ENST00000623478 SPINK5Q9NQ38 1064 aaPredicted RBP26.95■■□□□ 1.9
PCDHB4-202ENST00000623478 TRIM28Q13263 835 aaKnown RBP26.94■■□□□ 1.9
PCDHB4-202ENST00000623478 CC2D2BQ6DHV5 1058 aa26.94■■□□□ 1.9
PCDHB4-202ENST00000623478 STK31Q9BXU1 1019 aa26.94■■□□□ 1.9
PCDHB4-202ENST00000623478 DPY19L2Q6NUT2 758 aa26.93■■□□□ 1.9
PCDHB4-202ENST00000623478 PSMD1Q99460 953 aa26.93■■□□□ 1.9
PCDHB4-202ENST00000623478 WDR90Q96KV7 1748 aa26.93■■□□□ 1.9
PCDHB4-202ENST00000623478 DDX58O95786 925 aaKnown RBP26.92■■□□□ 1.9
PCDHB4-202ENST00000623478 HSPA6P17066 643 aa26.92■■□□□ 1.9
PCDHB4-202ENST00000623478 IARSP41252 1262 aaKnown RBP26.92■■□□□ 1.9
PCDHB4-202ENST00000623478 VEGFAP15692 232 aaPredicted RBP26.91■■□□□ 1.9
PCDHB4-202ENST00000623478 G2E3Q7L622 706 aa26.91■■□□□ 1.9
PCDHB4-202ENST00000623478 RBM46Q8TBY0 533 aaKnown RBP26.91■■□□□ 1.9
PCDHB4-202ENST00000623478 MAP3K2Q9Y2U5 619 aa26.91■■□□□ 1.9
PCDHB4-202ENST00000623478 ATP6V0A2Q9Y487 856 aa26.91■■□□□ 1.9
PCDHB4-202ENST00000623478 COL4A5P29400 1685 aa26.91■■□□□ 1.9
PCDHB4-202ENST00000623478 TAF1P21675 1872 aa26.9■■□□□ 1.9
PCDHB4-202ENST00000623478 POTECB2RU33 542 aa26.9■■□□□ 1.9
PCDHB4-202ENST00000623478 DDNO94850 711 aaPredicted RBP26.9■■□□□ 1.9
PCDHB4-202ENST00000623478 EXOSC9Q06265 439 aaKnown RBP26.9■■□□□ 1.9
PCDHB4-202ENST00000623478 DDX46Q7L014 1031 aaKnown RBP26.9■■□□□ 1.9
PCDHB4-202ENST00000623478 METTL22Q9BUU2 404 aaPredicted RBP26.9■■□□□ 1.9
PCDHB4-202ENST00000623478 ZNF541Q9H0D2 1346 aa26.9■■□□□ 1.9
PCDHB4-202ENST00000623478 PI4KAP2A4QPH2 592 aa26.89■■□□□ 1.9
PCDHB4-202ENST00000623478 IRS4O14654 1257 aaPredicted RBP26.89■■□□□ 1.9
PCDHB4-202ENST00000623478 SLC4A2P04920 1241 aa26.89■■□□□ 1.9
PCDHB4-202ENST00000623478 PI4KAP1Q8N8J0 262 aa26.89■■□□□ 1.9
PCDHB4-202ENST00000623478 GRAPQ13588 217 aa26.88■■□□□ 1.89
PCDHB4-202ENST00000623478 KSR2Q6VAB6 950 aa26.88■■□□□ 1.89
PCDHB4-202ENST00000623478 ZBTB38Q8NAP3 1195 aaPredicted RBP26.88■■□□□ 1.89
PCDHB4-202ENST00000623478 GRAPLQ8TC17 118 aaPredicted RBP26.88■■□□□ 1.89
PCDHB4-202ENST00000623478 COL4A1P02462 1669 aa26.88■■□□□ 1.89
PCDHB4-202ENST00000623478 VAMP4O75379 141 aa26.87■■□□□ 1.89
PCDHB4-202ENST00000623478 BBOX1O75936 387 aa26.87■■□□□ 1.89
PCDHB4-202ENST00000623478 GRIPAP1Q4V328 841 aa26.87■■□□□ 1.89
PCDHB4-202ENST00000623478 CCDC191Q8NCU4 936 aa26.87■■□□□ 1.89
PCDHB4-202ENST00000623478 CWC25Q9NXE8 425 aaPredicted RBP26.87■■□□□ 1.89
PCDHB4-202ENST00000623478 SF3B3Q15393 1217 aaKnown RBP26.86■■□□□ 1.89
PCDHB4-202ENST00000623478 JARID2Q92833 1246 aaPredicted RBP26.86■■□□□ 1.89
PCDHB4-202ENST00000623478 TMX4Q9H1E5 349 aaPredicted RBP26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms