RNA–Protein interactions for RNA: ENST00000623073.3

ERCC6-209, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 11,026 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-209ENST00000623073 KDM4AO75164 1064 aa7.33□□□□□ -1.24
ERCC6-209ENST00000623073 SSH2Q76I76 1423 aa7.33□□□□□ -1.24
ERCC6-209ENST00000623073 TBC1D31Q96DN5 1066 aa7.33□□□□□ -1.24
ERCC6-209ENST00000623073 TSG101Q99816 390 aa7.33□□□□□ -1.24
ERCC6-209ENST00000623073 EFCAB8A8MWE9 144 aa7.33□□□□□ -1.24
ERCC6-209ENST00000623073 AMPHP49418 695 aa7.33□□□□□ -1.24
ERCC6-209ENST00000623073 LMNB2Q03252 620 aa7.33□□□□□ -1.24
ERCC6-209ENST00000623073 MMS22LQ6ZRQ5 1243 aa7.33□□□□□ -1.24
ERCC6-209ENST00000623073 NDUFAB1O14561 156 aa7.33□□□□□ -1.24
ERCC6-209ENST00000623073 ZNF853P0CG23 659 aa7.33□□□□□ -1.24
ERCC6-209ENST00000623073 TWISTNBQ3B726 338 aaPredicted RBP7.33□□□□□ -1.24
ERCC6-209ENST00000623073 C1orf141Q5JVX7 400 aa7.33□□□□□ -1.24
ERCC6-209ENST00000623073 CEP85LQ5SZL2 805 aa7.33□□□□□ -1.24
ERCC6-209ENST00000623073 AOX1Q06278 1338 aa7.32□□□□□ -1.24
ERCC6-209ENST00000623073 CEP57Q86XR8 500 aa7.32□□□□□ -1.24
ERCC6-209ENST00000623073 CADPSQ9ULU8 1353 aa7.32□□□□□ -1.24
ERCC6-209ENST00000623073 NPHP1O15259 732 aa7.32□□□□□ -1.24
ERCC6-209ENST00000623073 TRIM21P19474 475 aaKnown RBP7.32□□□□□ -1.24
ERCC6-209ENST00000623073 MEX3CQ5U5Q3 659 aaKnown RBP7.32□□□□□ -1.24
ERCC6-209ENST00000623073 DHX37Q8IY37 1157 aaKnown RBP7.32□□□□□ -1.24
ERCC6-209ENST00000623073 MTRF1LQ9UGC7 380 aaKnown RBP7.32□□□□□ -1.24
ERCC6-209ENST00000623073 RNASELQ05823 741 aaKnown RBP7.32□□□□□ -1.24
ERCC6-209ENST00000623073 PDCD2Q16342 344 aaPredicted RBP7.32□□□□□ -1.24
ERCC6-209ENST00000623073 CTNNBL1Q8WYA6 563 aaPredicted RBP7.32□□□□□ -1.24
ERCC6-209ENST00000623073 DBN1Q16643 649 aa7.32□□□□□ -1.24
ERCC6-209ENST00000623073 RABGGTAQ92696 567 aa7.32□□□□□ -1.24
ERCC6-209ENST00000623073 BCL2L13Q9BXK5 485 aa7.32□□□□□ -1.24
ERCC6-209ENST00000623073 ZNF287Q9HBT7 754 aa7.32□□□□□ -1.24
ERCC6-209ENST00000623073 TICAM2Q86XR7 235 aa7.32□□□□□ -1.24
ERCC6-209ENST00000623073 MRFAP1L1Q96HT8 127 aa7.32□□□□□ -1.24
ERCC6-209ENST00000623073 RABGAP1Q9Y3P9 1069 aa7.32□□□□□ -1.24
ERCC6-209ENST00000623073 RARSP54136 660 aaKnown RBP7.31□□□□□ -1.24
ERCC6-209ENST00000623073 IRX1P78414 480 aaPredicted RBP7.31□□□□□ -1.24
ERCC6-209ENST00000623073 CEP104O60308 925 aa7.31□□□□□ -1.24
ERCC6-209ENST00000623073 KIAA1524Q8TCG1 905 aa7.31□□□□□ -1.24
ERCC6-209ENST00000623073 GDAP1L1Q96MZ0 367 aa7.31□□□□□ -1.24
ERCC6-209ENST00000623073 NCAPGQ9BPX3 1015 aa7.31□□□□□ -1.24
ERCC6-209ENST00000623073 DYNC1I2Q13409 638 aaKnown RBP7.31□□□□□ -1.24
ERCC6-209ENST00000623073 GRIPAP1Q4V328 841 aa7.31□□□□□ -1.24
ERCC6-209ENST00000623073 LMOD2Q6P5Q4 547 aa7.31□□□□□ -1.24
ERCC6-209ENST00000623073 BRAPQ7Z569 592 aa7.31□□□□□ -1.24
ERCC6-209ENST00000623073 CPLX4Q7Z7G2 160 aa7.31□□□□□ -1.24
ERCC6-209ENST00000623073 FERMT1Q9BQL6 677 aa7.31□□□□□ -1.24
ERCC6-209ENST00000623073 Q9H521 79 aa7.31□□□□□ -1.24
ERCC6-209ENST00000623073 ACTR5Q9H9F9 607 aaPredicted RBP7.31□□□□□ -1.24
ERCC6-209ENST00000623073 SURF6O75683 361 aaKnown RBP7.31□□□□□ -1.24
ERCC6-209ENST00000623073 STMN2Q93045 179 aa7.31□□□□□ -1.24
ERCC6-209ENST00000623073 PLCB1Q9NQ66 1216 aa7.31□□□□□ -1.24
ERCC6-209ENST00000623073 BATF3Q9NR55 127 aa7.31□□□□□ -1.24
ERCC6-209ENST00000623073 STMN1P16949 149 aa7.31□□□□□ -1.24
ERCC6-209ENST00000623073 CNGA1P29973 690 aa7.31□□□□□ -1.24
ERCC6-209ENST00000623073 SLC20A2Q08357 652 aa7.31□□□□□ -1.24
ERCC6-209ENST00000623073 APOBRQ0VD83 1088 aa7.31□□□□□ -1.24
ERCC6-209ENST00000623073 CABS1Q96KC9 395 aa7.31□□□□□ -1.24
ERCC6-209ENST00000623073 CCDC151A5D8V7 595 aa7.31□□□□□ -1.24
ERCC6-209ENST00000623073 TTC5Q8N0Z6 440 aa7.31□□□□□ -1.24
ERCC6-209ENST00000623073 PSDA5PKW4 1024 aaPredicted RBP7.31□□□□□ -1.24
ERCC6-209ENST00000623073 NBPF10Q6P3W6 841 aaKnown RBP7.31□□□□□ -1.24
ERCC6-209ENST00000623073 MRPS27Q92552 414 aaKnown RBP7.31□□□□□ -1.24
ERCC6-209ENST00000623073 NUTM2DQ5VT03 806 aaPredicted RBP7.31□□□□□ -1.24
ERCC6-209ENST00000623073 NUTM2AQ8IVF1 878 aaPredicted RBP7.31□□□□□ -1.24
ERCC6-209ENST00000623073 ATRIPQ8WXE1 791 aa7.31□□□□□ -1.24
ERCC6-209ENST00000623073 TRPC3Q13507 836 aa7.31□□□□□ -1.24
ERCC6-209ENST00000623073 USP37Q86T82 979 aa7.31□□□□□ -1.24
ERCC6-209ENST00000623073 KIAA0753Q2KHM9 967 aa7.3□□□□□ -1.24
ERCC6-209ENST00000623073 FOXD4L6Q3SYB3 417 aaPredicted RBP7.3□□□□□ -1.24
ERCC6-209ENST00000623073 FOXD4L3Q6VB84 417 aaPredicted RBP7.3□□□□□ -1.24
ERCC6-209ENST00000623073 RAB3IPQ96QF0 476 aaPredicted RBP7.3□□□□□ -1.24
ERCC6-209ENST00000623073 MOV10L1Q9BXT6 1211 aaKnown RBP7.3□□□□□ -1.24
ERCC6-209ENST00000623073 JRKLQ9Y4A0 524 aa7.3□□□□□ -1.24
ERCC6-209ENST00000623073 PIK3C2GO75747 1445 aa7.3□□□□□ -1.24
ERCC6-209ENST00000623073 SSFA2P28290 1259 aa7.3□□□□□ -1.24
ERCC6-209ENST00000623073 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.3□□□□□ -1.24
ERCC6-209ENST00000623073 STXBP4Q6ZWJ1 553 aa7.3□□□□□ -1.24
ERCC6-209ENST00000623073 PPFIA2O75334 1257 aa7.3□□□□□ -1.24
ERCC6-209ENST00000623073 DEUP1Q05D60 604 aa7.3□□□□□ -1.24
ERCC6-209ENST00000623073 KIF5AQ12840 1032 aa7.3□□□□□ -1.24
ERCC6-209ENST00000623073 RMDN2Q96LZ7 410 aa7.3□□□□□ -1.24
ERCC6-209ENST00000623073 NUP88Q99567 741 aaPredicted RBP7.3□□□□□ -1.24
ERCC6-209ENST00000623073 GEMIN8Q9NWZ8 242 aaKnown RBP7.3□□□□□ -1.24
ERCC6-209ENST00000623073 HCLS1P14317 486 aaPredicted RBP7.3□□□□□ -1.24
ERCC6-209ENST00000623073 TAOK1Q7L7X3 1001 aa7.3□□□□□ -1.24
ERCC6-209ENST00000623073 GNL3LQ9NVN8 582 aaKnown RBP7.3□□□□□ -1.24
ERCC6-209ENST00000623073 HYPKQ9NX55 129 aa7.3□□□□□ -1.24
ERCC6-209ENST00000623073 NAIPQ13075 1403 aa7.3□□□□□ -1.24
ERCC6-209ENST00000623073 MCTP2Q6DN12 878 aa7.3□□□□□ -1.24
ERCC6-209ENST00000623073 EIF2AK4Q9P2K8 1649 aaKnown RBP7.3□□□□□ -1.24
ERCC6-209ENST00000623073 GOLGA6CA6NDK9 693 aa7.3□□□□□ -1.24
ERCC6-209ENST00000623073 HIP1RO75146 1068 aa7.3□□□□□ -1.24
ERCC6-209ENST00000623073 GOLGA6DP0CG33 693 aa7.3□□□□□ -1.24
ERCC6-209ENST00000623073 KRBA2Q6ZNG9 492 aa7.3□□□□□ -1.24
ERCC6-209ENST00000623073 CCDC186Q7Z3E2 898 aa7.3□□□□□ -1.24
ERCC6-209ENST00000623073 RNF41Q9H4P4 317 aaPredicted RBP7.3□□□□□ -1.24
ERCC6-209ENST00000623073 GOLGA6AQ9NYA3 693 aa7.3□□□□□ -1.24
ERCC6-209ENST00000623073 CHMP4BP1P59074 171 aa7.3□□□□□ -1.24
ERCC6-209ENST00000623073 ERCC6LQ2NKX8 1250 aa7.3□□□□□ -1.24
ERCC6-209ENST00000623073 TMC6Q7Z403 805 aa7.3□□□□□ -1.24
ERCC6-209ENST00000623073 MAATS1Q7Z4T9 603 aa7.3□□□□□ -1.24
ERCC6-209ENST00000623073 ARHGAP18Q8N392 663 aa7.3□□□□□ -1.24
ERCC6-209ENST00000623073 CASQ2O14958 399 aaPredicted RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms