RNA–Protein interactions for RNA: ENST00000622494.1

RPRD1B-209, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 3

Gene RPRD1B, Length 469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-209ENST00000622494 A0A1W2PP64 1363 aa7.03□□□□□ -1.28
RPRD1B-209ENST00000622494 KTN1Q86UP2 1357 aaKnown RBP7.03□□□□□ -1.28
RPRD1B-209ENST00000622494 SBNO2Q9Y2G9 1366 aa7.03□□□□□ -1.28
RPRD1B-209ENST00000622494 SPATA31A1Q5TZJ5 1347 aa7.02□□□□□ -1.28
RPRD1B-209ENST00000622494 PEAK1Q9H792 1746 aa7.02□□□□□ -1.29
RPRD1B-209ENST00000622494 GPR37L1O60883 481 aa7.02□□□□□ -1.29
RPRD1B-209ENST00000622494 CTHP32929 405 aa7.02□□□□□ -1.29
RPRD1B-209ENST00000622494 FLIIQ13045 1269 aa7.02□□□□□ -1.29
RPRD1B-209ENST00000622494 NR6A1Q15406 480 aa7.02□□□□□ -1.29
RPRD1B-209ENST00000622494 SPRYD7Q5W111 196 aa7.02□□□□□ -1.29
RPRD1B-209ENST00000622494 EPS8L1Q8TE68 723 aa7.02□□□□□ -1.29
RPRD1B-209ENST00000622494 PRKD2Q9BZL6 878 aa7.02□□□□□ -1.29
RPRD1B-209ENST00000622494 TIMELESSQ9UNS1 1208 aa7.02□□□□□ -1.29
RPRD1B-209ENST00000622494 USP54Q70EL1 1684 aa7.02□□□□□ -1.29
RPRD1B-209ENST00000622494 RGPD1P0DJD0 1748 aa7.01□□□□□ -1.29
RPRD1B-209ENST00000622494 SBF2Q86WG5 1849 aa7.01□□□□□ -1.29
RPRD1B-209ENST00000622494 USP47Q96K76 1375 aa7.01□□□□□ -1.29
RPRD1B-209ENST00000622494 ZBTB24O43167 697 aaPredicted RBP7.01□□□□□ -1.29
RPRD1B-209ENST00000622494 ZEB1P37275 1124 aaPredicted RBP7.01□□□□□ -1.29
RPRD1B-209ENST00000622494 TRIM32Q13049 653 aa7.01□□□□□ -1.29
RPRD1B-209ENST00000622494 PARP4Q9UKK3 1724 aaKnown RBP7.01□□□□□ -1.29
RPRD1B-209ENST00000622494 ZC3H4Q9UPT8 1303 aaKnown RBP7.01□□□□□ -1.29
RPRD1B-209ENST00000622494 CPDO75976 1380 aa7□□□□□ -1.29
RPRD1B-209ENST00000622494 KIF20BQ96Q89 1820 aa7□□□□□ -1.29
RPRD1B-209ENST00000622494 WNT7BP56706 349 aa7□□□□□ -1.29
RPRD1B-209ENST00000622494 SKOR1P84550 965 aa7□□□□□ -1.29
RPRD1B-209ENST00000622494 ARMC2Q8NEN0 867 aa7□□□□□ -1.29
RPRD1B-209ENST00000622494 GPKOWQ92917 476 aaPredicted RBP eCLIP7□□□□□ -1.29
RPRD1B-209ENST00000622494 GTF3C3Q9Y5Q9 886 aa7□□□□□ -1.29
RPRD1B-209ENST00000622494 NUP188Q5SRE5 1749 aa7□□□□□ -1.29
RPRD1B-209ENST00000622494 BLMP54132 1417 aaPredicted RBP7□□□□□ -1.29
RPRD1B-209ENST00000622494 APBB1O00213 710 aa6.99□□□□□ -1.29
RPRD1B-209ENST00000622494 TRIM37O94972 964 aa6.99□□□□□ -1.29
RPRD1B-209ENST00000622494 CD2BP2O95400 341 aaKnown RBP6.99□□□□□ -1.29
RPRD1B-209ENST00000622494 EVA1CP58658 441 aa6.99□□□□□ -1.29
RPRD1B-209ENST00000622494 ZNF598Q86UK7 904 aaKnown RBP6.99□□□□□ -1.29
RPRD1B-209ENST00000622494 NLRP13Q86W25 1043 aa6.99□□□□□ -1.29
RPRD1B-209ENST00000622494 BAP1Q92560 729 aa6.99□□□□□ -1.29
RPRD1B-209ENST00000622494 FKBPLQ9UIM3 349 aa6.99□□□□□ -1.29
RPRD1B-209ENST00000622494 OVOS2A0A0J9YW53 1432 aa6.99□□□□□ -1.29
RPRD1B-209ENST00000622494 OVOS2Q6IE36 1432 aa6.99□□□□□ -1.29
RPRD1B-209ENST00000622494 RREB1Q92766 1687 aa6.98□□□□□ -1.29
RPRD1B-209ENST00000622494 SH3BP2P78314 561 aa6.98□□□□□ -1.29
RPRD1B-209ENST00000622494 EZH2Q15910 746 aaKnown RBP6.98□□□□□ -1.29
RPRD1B-209ENST00000622494 ARHGEF25Q86VW2 580 aa6.98□□□□□ -1.29
RPRD1B-209ENST00000622494 ZNF511Q8NB15 262 aa6.98□□□□□ -1.29
RPRD1B-209ENST00000622494 LTV1Q96GA3 475 aaPredicted RBP6.98□□□□□ -1.29
RPRD1B-209ENST00000622494 POLR3GLQ9BT43 218 aa6.98□□□□□ -1.29
RPRD1B-209ENST00000622494 NDUFB9Q9Y6M9 179 aa6.98□□□□□ -1.29
RPRD1B-209ENST00000622494 SHANK3Q9BYB0 1731 aa6.98□□□□□ -1.29
RPRD1B-209ENST00000622494 AATKQ6ZMQ8 1374 aa6.97□□□□□ -1.29
RPRD1B-209ENST00000622494 FAM208AQ9UK61 1670 aaKnown RBP6.97□□□□□ -1.29
RPRD1B-209ENST00000622494 C11orf95C9JLR9 678 aaPredicted RBP6.97□□□□□ -1.29
RPRD1B-209ENST00000622494 CRB1P82279 1406 aa6.97□□□□□ -1.29
RPRD1B-209ENST00000622494 NBPF14Q5TI25 921 aa6.97□□□□□ -1.29
RPRD1B-209ENST00000622494 PDXDC2PQ6P474 469 aa6.97□□□□□ -1.29
RPRD1B-209ENST00000622494 TOM1L2Q6ZVM7 507 aa6.97□□□□□ -1.29
RPRD1B-209ENST00000622494 SH3BP5LQ7L8J4 393 aa6.97□□□□□ -1.29
RPRD1B-209ENST00000622494 SH3RF1Q7Z6J0 888 aa6.97□□□□□ -1.29
RPRD1B-209ENST00000622494 MARCH10Q8NA82 808 aaPredicted RBP6.97□□□□□ -1.29
RPRD1B-209ENST00000622494 CARD14Q9BXL6 1004 aa6.97□□□□□ -1.29
RPRD1B-209ENST00000622494 GGNBP2Q9H3C7 697 aa6.97□□□□□ -1.29
RPRD1B-209ENST00000622494 DISP2A7MBM2 1401 aa6.96□□□□□ -1.3
RPRD1B-209ENST00000622494 EDC4Q6P2E9 1401 aaKnown RBP6.96□□□□□ -1.3
RPRD1B-209ENST00000622494 RRS1Q15050 365 aaKnown RBP6.96□□□□□ -1.3
RPRD1B-209ENST00000622494 ZNF697Q5TEC3 545 aa6.96□□□□□ -1.3
RPRD1B-209ENST00000622494 TCP11L2Q8N4U5 519 aa6.96□□□□□ -1.3
RPRD1B-209ENST00000622494 USHBP1Q8N6Y0 703 aa6.96□□□□□ -1.3
RPRD1B-209ENST00000622494 PNMA1Q8ND90 353 aa6.96□□□□□ -1.3
RPRD1B-209ENST00000622494 OCSTAMPQ9BR26 566 aa6.96□□□□□ -1.3
RPRD1B-209ENST00000622494 PKD2L1Q9P0L9 805 aa6.96□□□□□ -1.3
RPRD1B-209ENST00000622494 GPSM3Q9Y4H4 160 aa6.96□□□□□ -1.3
RPRD1B-209ENST00000622494 TTC21AQ8NDW8 1320 aa6.96□□□□□ -1.3
RPRD1B-209ENST00000622494 USP31Q70CQ4 1352 aa6.95□□□□□ -1.3
RPRD1B-209ENST00000622494 WNT7AO00755 349 aa6.95□□□□□ -1.3
RPRD1B-209ENST00000622494 GDF9O60383 454 aa6.95□□□□□ -1.3
RPRD1B-209ENST00000622494 CSB-PGBD3P0DP91 1061 aa6.95□□□□□ -1.3
RPRD1B-209ENST00000622494 HSPA5P11021 654 aaKnown RBP6.95□□□□□ -1.3
RPRD1B-209ENST00000622494 R3HDM1Q15032 1099 aaKnown RBP6.95□□□□□ -1.3
RPRD1B-209ENST00000622494 LINC01559Q495D7 138 aa6.95□□□□□ -1.3
RPRD1B-209ENST00000622494 C4orf48Q5BLP8 95 aa6.95□□□□□ -1.3
RPRD1B-209ENST00000622494 TRIM67Q6ZTA4 783 aa6.95□□□□□ -1.3
RPRD1B-209ENST00000622494 ANKRD24Q8TF21 1146 aa6.95□□□□□ -1.3
RPRD1B-209ENST00000622494 PDGFDQ9GZP0 370 aaPredicted RBP6.95□□□□□ -1.3
RPRD1B-209ENST00000622494 TBC1D2BQ9UPU7 963 aa6.95□□□□□ -1.3
RPRD1B-209ENST00000622494 COG6Q9Y2V7 657 aa6.95□□□□□ -1.3
RPRD1B-209ENST00000622494 WDR17Q8IZU2 1322 aa6.95□□□□□ -1.3
RPRD1B-209ENST00000622494 NSD3Q9BZ95 1437 aa6.94□□□□□ -1.3
RPRD1B-209ENST00000622494 KCNQ2O43526 872 aa6.94□□□□□ -1.3
RPRD1B-209ENST00000622494 PRR20EP86478 221 aa6.94□□□□□ -1.3
RPRD1B-209ENST00000622494 PRR20CP86479 221 aa6.94□□□□□ -1.3
RPRD1B-209ENST00000622494 PRR20DP86480 221 aa6.94□□□□□ -1.3
RPRD1B-209ENST00000622494 PRR20BP86481 221 aa6.94□□□□□ -1.3
RPRD1B-209ENST00000622494 PRR20AP86496 221 aa6.94□□□□□ -1.3
RPRD1B-209ENST00000622494 RC3H1Q5TC82 1133 aaKnown RBP6.94□□□□□ -1.3
RPRD1B-209ENST00000622494 HDGFL2Q7Z4V5 671 aaPredicted RBP6.94□□□□□ -1.3
RPRD1B-209ENST00000622494 FOXJ1Q92949 421 aa6.94□□□□□ -1.3
RPRD1B-209ENST00000622494 ACSBG1Q96GR2 724 aa6.94□□□□□ -1.3
RPRD1B-209ENST00000622494 CAMKK2Q96RR4 588 aa6.94□□□□□ -1.3
RPRD1B-209ENST00000622494 C1QTNF2Q9BXJ5 285 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms