RNA–Protein interactions for RNA: ENST00000622329.1

RNU6-538P-201, Transcript of RNA, U6 small nuclear 538, pseudogene, humanhuman

BASIC

Gene RNU6-538P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-538P-201ENST00000622329 PHACTR1Q9C0D0 580 aa8.55□□□□□ -1.04
RNU6-538P-201ENST00000622329 HCN4Q9Y3Q4 1203 aa8.55□□□□□ -1.04
RNU6-538P-201ENST00000622329 IGSF3O75054 1194 aa8.54□□□□□ -1.04
RNU6-538P-201ENST00000622329 POM121Q96HA1 1249 aa8.54□□□□□ -1.04
RNU6-538P-201ENST00000622329 SUSD3Q96L08 255 aa8.54□□□□□ -1.04
RNU6-538P-201ENST00000622329 NACC1Q96RE7 527 aa8.54□□□□□ -1.04
RNU6-538P-201ENST00000622329 SFI1A8K8P3 1242 aa8.53□□□□□ -1.04
RNU6-538P-201ENST00000622329 H2AFB1P0C5Y9 115 aa8.53□□□□□ -1.04
RNU6-538P-201ENST00000622329 H2AFB2P0C5Z0 115 aa8.53□□□□□ -1.04
RNU6-538P-201ENST00000622329 PSMA6P60900 246 aaKnown RBP8.53□□□□□ -1.04
RNU6-538P-201ENST00000622329 LCE3BQ5TA77 95 aa8.53□□□□□ -1.04
RNU6-538P-201ENST00000622329 TPCN2Q8NHX9 752 aa8.53□□□□□ -1.04
RNU6-538P-201ENST00000622329 CEP63Q96MT8 703 aa8.53□□□□□ -1.04
RNU6-538P-201ENST00000622329 UCN2Q96RP3 112 aa8.53□□□□□ -1.04
RNU6-538P-201ENST00000622329 NAGPAQ9UK23 515 aa8.53□□□□□ -1.04
RNU6-538P-201ENST00000622329 KCNH4Q9UQ05 1017 aa8.53□□□□□ -1.04
RNU6-538P-201ENST00000622329 POM121CA8CG34 1229 aa8.51□□□□□ -1.05
RNU6-538P-201ENST00000622329 C9orf172C9J069 976 aa8.51□□□□□ -1.05
RNU6-538P-201ENST00000622329 RAD21O60216 631 aa8.51□□□□□ -1.05
RNU6-538P-201ENST00000622329 ELNP15502 786 aa8.51□□□□□ -1.05
RNU6-538P-201ENST00000622329 CDK11BP21127 795 aaKnown RBP8.51□□□□□ -1.05
RNU6-538P-201ENST00000622329 GRNP28799 593 aaKnown RBP8.51□□□□□ -1.05
RNU6-538P-201ENST00000622329 TRAPPC3LQ5T215 181 aa8.51□□□□□ -1.05
RNU6-538P-201ENST00000622329 CCDC102BQ68D86 513 aa8.51□□□□□ -1.05
RNU6-538P-201ENST00000622329 PLEKHM2Q8IWE5 1019 aa8.51□□□□□ -1.05
RNU6-538P-201ENST00000622329 BHMTQ93088 406 aa8.51□□□□□ -1.05
RNU6-538P-201ENST00000622329 LENG1Q96BZ8 264 aaPredicted RBP8.51□□□□□ -1.05
RNU6-538P-201ENST00000622329 NEUROD4Q9HD90 331 aa8.51□□□□□ -1.05
RNU6-538P-201ENST00000622329 SLC6A14Q9UN76 642 aa8.51□□□□□ -1.05
RNU6-538P-201ENST00000622329 CDK11AQ9UQ88 783 aaPredicted RBP8.51□□□□□ -1.05
RNU6-538P-201ENST00000622329 LILRB5O75023 590 aa8.5□□□□□ -1.05
RNU6-538P-201ENST00000622329 HSP90B1P14625 803 aaKnown RBP8.5□□□□□ -1.05
RNU6-538P-201ENST00000622329 AFF1P51825 1210 aaKnown RBP8.5□□□□□ -1.05
RNU6-538P-201ENST00000622329 TXNRD3Q86VQ6 643 aa8.5□□□□□ -1.05
RNU6-538P-201ENST00000622329 KRTAP19-1Q8IUB9 90 aa8.5□□□□□ -1.05
RNU6-538P-201ENST00000622329 M0R2N6 131 aa8.49□□□□□ -1.05
RNU6-538P-201ENST00000622329 USP17L3A6NCW0 530 aa8.48□□□□□ -1.05
RNU6-538P-201ENST00000622329 USP17L4A6NCW7 530 aa8.48□□□□□ -1.05
RNU6-538P-201ENST00000622329 HYAL3O43820 417 aaPredicted RBP8.48□□□□□ -1.05
RNU6-538P-201ENST00000622329 LRP8Q14114 963 aa8.48□□□□□ -1.05
RNU6-538P-201ENST00000622329 USP17L2Q6R6M4 530 aa8.48□□□□□ -1.05
RNU6-538P-201ENST00000622329 USP17L1Q7RTZ2 530 aa8.48□□□□□ -1.05
RNU6-538P-201ENST00000622329 BTLAQ7Z6A9 289 aa8.48□□□□□ -1.05
RNU6-538P-201ENST00000622329 TSEN2Q8NCE0 465 aaKnown RBP8.48□□□□□ -1.05
RNU6-538P-201ENST00000622329 RGS22Q8NE09 1264 aa8.48□□□□□ -1.05
RNU6-538P-201ENST00000622329 NUDT8Q8WV74 236 aa8.48□□□□□ -1.05
RNU6-538P-201ENST00000622329 TRAIPQ9BWF2 469 aa8.48□□□□□ -1.05
RNU6-538P-201ENST00000622329 GSX2Q9BZM3 304 aa8.48□□□□□ -1.05
RNU6-538P-201ENST00000622329 NRG1Q02297 640 aaPredicted RBP8.47□□□□□ -1.05
RNU6-538P-201ENST00000622329 GRIK5Q16478 980 aa8.47□□□□□ -1.05
RNU6-538P-201ENST00000622329 ALDH16A1Q8IZ83 802 aa8.47□□□□□ -1.05
RNU6-538P-201ENST00000622329 FMR1NBQ8N0W7 255 aaPredicted RBP8.47□□□□□ -1.05
RNU6-538P-201ENST00000622329 SIX5Q8N196 739 aa8.47□□□□□ -1.05
RNU6-538P-201ENST00000622329 KRTAP9-9Q9BYP9 154 aa8.47□□□□□ -1.05
RNU6-538P-201ENST00000622329 KRTAP9-4Q9BYQ2 154 aa8.47□□□□□ -1.05
RNU6-538P-201ENST00000622329 JPH1Q9HDC5 661 aaPredicted RBP8.47□□□□□ -1.05
RNU6-538P-201ENST00000622329 ANKIB1Q9P2G1 1089 aa8.47□□□□□ -1.05
RNU6-538P-201ENST00000622329 DMGDHQ9UI17 866 aaKnown RBP8.47□□□□□ -1.05
RNU6-538P-201ENST00000622329 BCS1LQ9Y276 419 aa8.47□□□□□ -1.05
RNU6-538P-201ENST00000622329 PLAURQ03405 335 aa8.46□□□□□ -1.06
RNU6-538P-201ENST00000622329 NEUROD1Q13562 356 aa8.46□□□□□ -1.06
RNU6-538P-201ENST00000622329 TRIM50Q86XT4 487 aa8.46□□□□□ -1.06
RNU6-538P-201ENST00000622329 OGFOD1Q8N543 542 aa8.46□□□□□ -1.06
RNU6-538P-201ENST00000622329 C2orf49Q9BVC5 232 aaPredicted RBP8.46□□□□□ -1.06
RNU6-538P-201ENST00000622329 UBE2OQ9C0C9 1292 aaKnown RBP8.46□□□□□ -1.06
RNU6-538P-201ENST00000622329 DNAJB12Q9NXW2 375 aaKnown RBP8.46□□□□□ -1.06
RNU6-538P-201ENST00000622329 CCDC82Q8N4S0 544 aa8.45□□□□□ -1.06
RNU6-538P-201ENST00000622329 TBC1D8BQ0IIM8 1120 aa8.44□□□□□ -1.06
RNU6-538P-201ENST00000622329 FLIIQ13045 1269 aa8.44□□□□□ -1.06
RNU6-538P-201ENST00000622329 PSAPL1Q6NUJ1 521 aa8.44□□□□□ -1.06
RNU6-538P-201ENST00000622329 DMRTC2Q8IXT2 367 aaPredicted RBP8.44□□□□□ -1.06
RNU6-538P-201ENST00000622329 STAG2Q8N3U4 1231 aa8.44□□□□□ -1.06
RNU6-538P-201ENST00000622329 LARGE2Q8N3Y3 721 aa8.44□□□□□ -1.06
RNU6-538P-201ENST00000622329 TP53INP1Q96A56 240 aa8.44□□□□□ -1.06
RNU6-538P-201ENST00000622329 PPP1R12BO60237 982 aaPredicted RBP8.43□□□□□ -1.06
RNU6-538P-201ENST00000622329 ATP1A2P50993 1020 aa8.43□□□□□ -1.06
RNU6-538P-201ENST00000622329 IGFLR1Q9H665 355 aa8.43□□□□□ -1.06
RNU6-538P-201ENST00000622329 ZBTB42B2RXF5 422 aa8.42□□□□□ -1.06
RNU6-538P-201ENST00000622329 ATP9BO43861 1147 aa8.42□□□□□ -1.06
RNU6-538P-201ENST00000622329 LPIN3Q9BQK8 851 aa8.42□□□□□ -1.06
RNU6-538P-201ENST00000622329 MKRN1Q9UHC7 482 aaKnown RBP8.42□□□□□ -1.06
RNU6-538P-201ENST00000622329 ATAD2Q6PL18 1390 aa8.42□□□□□ -1.06
RNU6-538P-201ENST00000622329 PALM3A6NDB9 673 aaPredicted RBP8.41□□□□□ -1.06
RNU6-538P-201ENST00000622329 RAC1P63000 192 aa8.41□□□□□ -1.06
RNU6-538P-201ENST00000622329 TMCO4Q5TGY1 634 aa8.41□□□□□ -1.06
RNU6-538P-201ENST00000622329 ZFATQ9P243 1243 aa8.41□□□□□ -1.06
RNU6-538P-201ENST00000622329 MTMR7Q9Y216 660 aa8.41□□□□□ -1.06
RNU6-538P-201ENST00000622329 NFKB1P19838 968 aa8.4□□□□□ -1.06
RNU6-538P-201ENST00000622329 IER5Q5VY09 327 aa8.4□□□□□ -1.06
RNU6-538P-201ENST00000622329 NBPF11Q86T75 865 aa8.4□□□□□ -1.06
RNU6-538P-201ENST00000622329 GAS2L2Q8NHY3 880 aa8.4□□□□□ -1.06
RNU6-538P-201ENST00000622329 ZNF594Q96JF6 807 aaPredicted RBP8.4□□□□□ -1.06
RNU6-538P-201ENST00000622329 PUS7Q96PZ0 661 aaKnown RBP8.4□□□□□ -1.06
RNU6-538P-201ENST00000622329 EFCC1Q9HA90 598 aa8.4□□□□□ -1.06
RNU6-538P-201ENST00000622329 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.4□□□□□ -1.06
RNU6-538P-201ENST00000622329 NOS3P29474 1203 aa8.39□□□□□ -1.07
RNU6-538P-201ENST00000622329 MSL1Q68DK7 614 aa8.39□□□□□ -1.07
RNU6-538P-201ENST00000622329 WFDC12Q8WWY7 111 aa8.39□□□□□ -1.07
RNU6-538P-201ENST00000622329 SCG3Q8WXD2 468 aaKnown RBP8.39□□□□□ -1.07
RNU6-538P-201ENST00000622329 DEAF1O75398 565 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms