RNA–Protein interactions for RNA: ENST00000622233.1

RAB28P4-201, Transcript of RAB28, member RAS oncogene family pseudogene 4, humanhuman

BASIC

Gene RAB28P4, Length 665 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P4-201ENST00000622233 IGFBP4P22692 258 aa10.48□□□□□ -0.73
RAB28P4-201ENST00000622233 SMCPP49901 116 aaPredicted RBP10.48□□□□□ -0.73
RAB28P4-201ENST00000622233 ZDHHC1Q8WTX9 485 aa10.48□□□□□ -0.73
RAB28P4-201ENST00000622233 ZSCAN10Q96SZ4 725 aaPredicted RBP10.48□□□□□ -0.73
RAB28P4-201ENST00000622233 AAASQ9NRG9 546 aa10.48□□□□□ -0.73
RAB28P4-201ENST00000622233 IVNS1ABPQ9Y6Y0 642 aa10.48□□□□□ -0.73
RAB28P4-201ENST00000622233 HNRNPMP52272 730 aaKnown RBP eCLIP10.47□□□□□ -0.73
RAB28P4-201ENST00000622233 CTC1Q2NKJ3 1217 aa10.47□□□□□ -0.73
RAB28P4-201ENST00000622233 SLC27A3Q5K4L6 730 aa10.47□□□□□ -0.73
RAB28P4-201ENST00000622233 TAS1R3Q7RTX0 852 aa10.47□□□□□ -0.73
RAB28P4-201ENST00000622233 ZNF295-AS1Q8N0V1 137 aa10.47□□□□□ -0.73
RAB28P4-201ENST00000622233 ZFP42Q96MM3 310 aa10.47□□□□□ -0.73
RAB28P4-201ENST00000622233 IRX2Q9BZI1 471 aaPredicted RBP10.47□□□□□ -0.73
RAB28P4-201ENST00000622233 GRIP2Q9C0E4 1043 aa10.47□□□□□ -0.73
RAB28P4-201ENST00000622233 SEPT3Q9UH03 358 aa10.47□□□□□ -0.73
RAB28P4-201ENST00000622233 FGD6Q6ZV73 1430 aa10.47□□□□□ -0.73
RAB28P4-201ENST00000622233 DNMT1P26358 1616 aaKnown RBP10.47□□□□□ -0.73
RAB28P4-201ENST00000622233 FIGNL2A6NMB9 653 aa10.46□□□□□ -0.73
RAB28P4-201ENST00000622233 CDK2AP1O14519 115 aa10.46□□□□□ -0.73
RAB28P4-201ENST00000622233 SERPINB4P48594 390 aa10.46□□□□□ -0.73
RAB28P4-201ENST00000622233 RNF144AP50876 292 aaPredicted RBP10.46□□□□□ -0.73
RAB28P4-201ENST00000622233 KCNA1Q09470 495 aa10.46□□□□□ -0.73
RAB28P4-201ENST00000622233 TXNDC2Q86VQ3 553 aa10.46□□□□□ -0.73
RAB28P4-201ENST00000622233 RTEL1-TNFRSF6BF6WH68 1400 aa10.46□□□□□ -0.74
RAB28P4-201ENST00000622233 NAA30Q147X3 362 aaPredicted RBP10.45□□□□□ -0.74
RAB28P4-201ENST00000622233 B4GALNT3Q6L9W6 998 aa10.45□□□□□ -0.74
RAB28P4-201ENST00000622233 PRICKLE2Q7Z3G6 844 aa10.45□□□□□ -0.74
RAB28P4-201ENST00000622233 PPARGC1BQ86YN6 1023 aaKnown RBP10.45□□□□□ -0.74
RAB28P4-201ENST00000622233 CRIPAKQ8N1N5 446 aa10.45□□□□□ -0.74
RAB28P4-201ENST00000622233 RNF217Q8TC41 542 aa10.45□□□□□ -0.74
RAB28P4-201ENST00000622233 CABP1Q9NZU7 370 aa10.45□□□□□ -0.74
RAB28P4-201ENST00000622233 SHANK2Q9UPX8 1470 aa10.44□□□□□ -0.74
RAB28P4-201ENST00000622233 SPAG9O60271 1321 aaKnown RBP10.44□□□□□ -0.74
RAB28P4-201ENST00000622233 ZBTB7CA1YPR0 619 aa10.44□□□□□ -0.74
RAB28P4-201ENST00000622233 PHKA2P46019 1235 aa10.44□□□□□ -0.74
RAB28P4-201ENST00000622233 SCARF1Q14162 830 aa10.44□□□□□ -0.74
RAB28P4-201ENST00000622233 TMEM214Q6NUQ4 689 aaKnown RBP10.44□□□□□ -0.74
RAB28P4-201ENST00000622233 C1orf216Q8TAB5 229 aa10.44□□□□□ -0.74
RAB28P4-201ENST00000622233 A2MP01023 1474 aa10.43□□□□□ -0.74
RAB28P4-201ENST00000622233 PTPRMP28827 1452 aa10.43□□□□□ -0.74
RAB28P4-201ENST00000622233 RHOQP17081 205 aa10.43□□□□□ -0.74
RAB28P4-201ENST00000622233 PSMA6P60900 246 aaKnown RBP10.43□□□□□ -0.74
RAB28P4-201ENST00000622233 POU4F2Q12837 409 aa10.43□□□□□ -0.74
RAB28P4-201ENST00000622233 LAPTM4AQ15012 233 aa10.43□□□□□ -0.74
RAB28P4-201ENST00000622233 C4orf17Q53FE4 359 aa10.43□□□□□ -0.74
RAB28P4-201ENST00000622233 C2orf49Q9BVC5 232 aaPredicted RBP10.43□□□□□ -0.74
RAB28P4-201ENST00000622233 GZF1Q9H116 711 aaPredicted RBP10.43□□□□□ -0.74
RAB28P4-201ENST00000622233 ATP13A2Q9NQ11 1180 aa10.43□□□□□ -0.74
RAB28P4-201ENST00000622233 SOS2Q07890 1332 aaPredicted RBP10.42□□□□□ -0.74
RAB28P4-201ENST00000622233 TTLL8A6PVC2 850 aa10.42□□□□□ -0.74
RAB28P4-201ENST00000622233 SOBPA7XYQ1 873 aa10.42□□□□□ -0.74
RAB28P4-201ENST00000622233 EML1O00423 815 aa10.42□□□□□ -0.74
RAB28P4-201ENST00000622233 FOXO3O43524 673 aa10.42□□□□□ -0.74
RAB28P4-201ENST00000622233 GPC1P35052 558 aa10.42□□□□□ -0.74
RAB28P4-201ENST00000622233 RHBDD1Q8TEB9 315 aa10.42□□□□□ -0.74
RAB28P4-201ENST00000622233 ANO2Q9NQ90 1003 aa10.42□□□□□ -0.74
RAB28P4-201ENST00000622233 HCN4Q9Y3Q4 1203 aa10.42□□□□□ -0.74
RAB28P4-201ENST00000622233 MROH2AA6NES4 1674 aa10.41□□□□□ -0.74
RAB28P4-201ENST00000622233 EIF2AK4Q9P2K8 1649 aaKnown RBP10.41□□□□□ -0.74
RAB28P4-201ENST00000622233 LCE2BO14633 110 aa10.41□□□□□ -0.74
RAB28P4-201ENST00000622233 ARID4AP29374 1257 aaPredicted RBP10.41□□□□□ -0.74
RAB28P4-201ENST00000622233 NOS2P35228 1153 aa10.41□□□□□ -0.74
RAB28P4-201ENST00000622233 PLA2G4AP47712 749 aa10.41□□□□□ -0.74
RAB28P4-201ENST00000622233 TEAD4Q15561 434 aa10.41□□□□□ -0.74
RAB28P4-201ENST00000622233 L3MBTL2Q969R5 705 aa10.41□□□□□ -0.74
RAB28P4-201ENST00000622233 SAP130Q9H0E3 1048 aa10.41□□□□□ -0.74
RAB28P4-201ENST00000622233 DNMT3LQ9UJW3 386 aa10.41□□□□□ -0.74
RAB28P4-201ENST00000622233 ZNF232Q9UNY5 417 aa10.41□□□□□ -0.74
RAB28P4-201ENST00000622233 ABCC5O15440 1437 aa10.41□□□□□ -0.74
RAB28P4-201ENST00000622233 DAPK1P53355 1430 aa10.41□□□□□ -0.74
RAB28P4-201ENST00000622233 ARID4BQ4LE39 1312 aaPredicted RBP10.4□□□□□ -0.74
RAB28P4-201ENST00000622233 SERTM1A2A2V5 107 aa10.4□□□□□ -0.74
RAB28P4-201ENST00000622233 TXLNAP40222 546 aa10.4□□□□□ -0.74
RAB28P4-201ENST00000622233 MTMR3Q13615 1198 aa10.4□□□□□ -0.74
RAB28P4-201ENST00000622233 NBPF15Q8N660 670 aa10.4□□□□□ -0.74
RAB28P4-201ENST00000622233 NGLY1Q96IV0 654 aa10.4□□□□□ -0.74
RAB28P4-201ENST00000622233 C3P01024 1663 aa10.4□□□□□ -0.74
RAB28P4-201ENST00000622233 RNF17Q9BXT8 1623 aaKnown RBP10.4□□□□□ -0.75
RAB28P4-201ENST00000622233 ABL1P00519 1130 aa10.39□□□□□ -0.75
RAB28P4-201ENST00000622233 ZNF211Q13398 564 aaPredicted RBP10.39□□□□□ -0.75
RAB28P4-201ENST00000622233 GNASQ5JWF2 1037 aa10.39□□□□□ -0.75
RAB28P4-201ENST00000622233 LYSMD3Q7Z3D4 306 aa10.39□□□□□ -0.75
RAB28P4-201ENST00000622233 NIFKQ9BYG3 293 aaKnown RBP10.39□□□□□ -0.75
RAB28P4-201ENST00000622233 PODXL2Q9NZ53 605 aa10.39□□□□□ -0.75
RAB28P4-201ENST00000622233 GNEQ9Y223 722 aaKnown RBP10.39□□□□□ -0.75
RAB28P4-201ENST00000622233 SPATA31C2B4DYI2 1134 aa10.38□□□□□ -0.75
RAB28P4-201ENST00000622233 GTF3C2Q8WUA4 911 aaPredicted RBP10.38□□□□□ -0.75
RAB28P4-201ENST00000622233 VTI1AQ96AJ9 217 aa10.38□□□□□ -0.75
RAB28P4-201ENST00000622233 KLRG1Q96E93 195 aa10.38□□□□□ -0.75
RAB28P4-201ENST00000622233 QTRT2Q9H974 415 aaKnown RBP10.38□□□□□ -0.75
RAB28P4-201ENST00000622233 FAM135AQ9P2D6 1515 aa10.38□□□□□ -0.75
RAB28P4-201ENST00000622233 CLTCQ00610 1675 aaKnown RBP10.38□□□□□ -0.75
RAB28P4-201ENST00000622233 ADGRL2O95490 1459 aa10.37□□□□□ -0.75
RAB28P4-201ENST00000622233 MROH1Q8NDA8 1641 aa10.37□□□□□ -0.75
RAB28P4-201ENST00000622233 GTF2E1P29083 439 aaPredicted RBP10.37□□□□□ -0.75
RAB28P4-201ENST00000622233 NBPF10Q6P3W6 841 aaKnown RBP10.37□□□□□ -0.75
RAB28P4-201ENST00000622233 POTEAQ6S8J7 498 aa10.37□□□□□ -0.75
RAB28P4-201ENST00000622233 CCER1Q8TC90 406 aaPredicted RBP10.37□□□□□ -0.75
RAB28P4-201ENST00000622233 DNMT3AQ9Y6K1 912 aaPredicted RBP10.37□□□□□ -0.75
RAB28P4-201ENST00000622233 DHX29Q7Z478 1369 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms